RNA–Protein interactions for RNA: ENST00000557163.1

TMEM30B-203, Transcript of transmembrane protein 30B, humanhuman

TSL 1 (best)

Gene TMEM30B, Length 1,263 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30B-203ENST00000557163 PTPRKQ15262 1439 aa28.41■■■□□ 2.14
TMEM30B-203ENST00000557163 SHANK2Q9UPX8 1470 aa28.4■■■□□ 2.14
TMEM30B-203ENST00000557163 PTPRTO14522 1441 aa28.36■■■□□ 2.13
TMEM30B-203ENST00000557163 NCOA1Q15788 1441 aa28.36■■■□□ 2.13
TMEM30B-203ENST00000557163 CAMSAP1Q5T5Y3 1602 aa28.36■■■□□ 2.13
TMEM30B-203ENST00000557163 MYO3AQ8NEV4 1616 aa28.36■■■□□ 2.13
TMEM30B-203ENST00000557163 DAPK1P53355 1430 aa28.34■■■□□ 2.13
TMEM30B-203ENST00000557163 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.33■■■□□ 2.13
TMEM30B-203ENST00000557163 ABCC5O15440 1437 aa28.31■■■□□ 2.12
TMEM30B-203ENST00000557163 ZNF142P52746 1687 aaPredicted RBP28.31■■■□□ 2.12
TMEM30B-203ENST00000557163 CEP170BQ9Y4F5 1589 aaPredicted RBP28.3■■■□□ 2.12
TMEM30B-203ENST00000557163 WASHC2CQ9Y4E1 1318 aa28.3■■■□□ 2.12
TMEM30B-203ENST00000557163 KDM5DQ9BY66 1539 aa28.29■■■□□ 2.12
TMEM30B-203ENST00000557163 NCKAP5LQ9HCH0 1330 aa28.29■■■□□ 2.12
TMEM30B-203ENST00000557163 FAM50AQ14320 339 aaKnown RBP28.28■■■□□ 2.12
TMEM30B-203ENST00000557163 FBXO31Q5XUX0 539 aaPredicted RBP28.27■■■□□ 2.12
TMEM30B-203ENST00000557163 EIF2AK4Q9P2K8 1649 aaKnown RBP28.26■■■□□ 2.11
TMEM30B-203ENST00000557163 DUOX2Q9NRD8 1548 aa28.25■■■□□ 2.11
TMEM30B-203ENST00000557163 FAM135AQ9P2D6 1515 aa28.25■■■□□ 2.11
TMEM30B-203ENST00000557163 PZPP20742 1482 aa28.23■■■□□ 2.11
TMEM30B-203ENST00000557163 TNRQ92752 1358 aa28.23■■■□□ 2.11
TMEM30B-203ENST00000557163 ANKRD30AQ9BXX3 1397 aa28.23■■■□□ 2.11
TMEM30B-203ENST00000557163 A2ML1A8K2U0 1454 aa28.22■■■□□ 2.11
TMEM30B-203ENST00000557163 PLA2R1Q13018 1463 aa28.21■■■□□ 2.11
TMEM30B-203ENST00000557163 PPARGC1BQ86YN6 1023 aaKnown RBP28.21■■■□□ 2.11
TMEM30B-203ENST00000557163 RRBP1Q9P2E9 1410 aaKnown RBP28.2■■■□□ 2.11
TMEM30B-203ENST00000557163 PKD2Q13563 968 aa28.2■■■□□ 2.1
TMEM30B-203ENST00000557163 ADGRL2O95490 1459 aa28.2■■■□□ 2.1
TMEM30B-203ENST00000557163 RNF17Q9BXT8 1623 aaKnown RBP28.19■■■□□ 2.1
TMEM30B-203ENST00000557163 LTBP4Q8N2S1 1624 aa28.18■■■□□ 2.1
TMEM30B-203ENST00000557163 KIF15Q9NS87 1388 aa28.17■■■□□ 2.1
TMEM30B-203ENST00000557163 ERBINQ96RT1 1412 aa28.17■■■□□ 2.1
TMEM30B-203ENST00000557163 ABCC3O15438 1527 aa28.13■■■□□ 2.09
TMEM30B-203ENST00000557163 RRP7BPQ9NSQ0 103 aa28.12■■■□□ 2.09
TMEM30B-203ENST00000557163 ROCK1Q13464 1354 aa28.11■■■□□ 2.09
TMEM30B-203ENST00000557163 ZC3H13Q5T200 1668 aaKnown RBP28.11■■■□□ 2.09
TMEM30B-203ENST00000557163 ZNF335Q9H4Z2 1342 aaPredicted RBP28.11■■■□□ 2.09
TMEM30B-203ENST00000557163 MROH1Q8NDA8 1641 aa28.1■■■□□ 2.09
TMEM30B-203ENST00000557163 CEP152O94986 1710 aa28.07■■■□□ 2.08
TMEM30B-203ENST00000557163 CHIC2Q9UKJ5 165 aa28.07■■■□□ 2.08
TMEM30B-203ENST00000557163 NLRP1Q9C000 1473 aa28.07■■■□□ 2.08
TMEM30B-203ENST00000557163 CFAP65Q6ZU64 1925 aaKnown RBP28.05■■■□□ 2.08
TMEM30B-203ENST00000557163 THEMISQ8N1K5 641 aaPredicted RBP28.05■■■□□ 2.08
TMEM30B-203ENST00000557163 POLR1AO95602 1720 aaPredicted RBP28.04■■■□□ 2.08
TMEM30B-203ENST00000557163 DEPDC5O75140 1603 aa28.03■■■□□ 2.08
TMEM30B-203ENST00000557163 UGGT1Q9NYU2 1555 aa28.03■■■□□ 2.08
TMEM30B-203ENST00000557163 IQSEC2Q5JU85 1478 aa28.02■■■□□ 2.08
TMEM30B-203ENST00000557163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.02■■■□□ 2.08
TMEM30B-203ENST00000557163 SPATA31D1Q6ZQQ2 1576 aa28.02■■■□□ 2.08
TMEM30B-203ENST00000557163 ERVK-7P63135 1459 aa28.02■■■□□ 2.08
TMEM30B-203ENST00000557163 ANKLE2Q86XL3 938 aa28.01■■■□□ 2.07
TMEM30B-203ENST00000557163 PRDM15P57071 1507 aaPredicted RBP28.01■■■□□ 2.07
TMEM30B-203ENST00000557163 NEURL4Q96JN8 1562 aa27.99■■■□□ 2.07
TMEM30B-203ENST00000557163 ANKRD50Q9ULJ7 1429 aa27.99■■■□□ 2.07
TMEM30B-203ENST00000557163 KANK1Q14678 1352 aa27.98■■■□□ 2.07
TMEM30B-203ENST00000557163 ITGAEP38570 1179 aa27.93■■■□□ 2.06
TMEM30B-203ENST00000557163 ARHGAP31Q2M1Z3 1444 aa27.91■■■□□ 2.06
TMEM30B-203ENST00000557163 UBAP1LF5GYI3 381 aa27.9■■■□□ 2.06
TMEM30B-203ENST00000557163 NPHP4O75161 1426 aaPredicted RBP27.9■■■□□ 2.06
TMEM30B-203ENST00000557163 GCC2Q8IWJ2 1684 aa27.87■■■□□ 2.05
TMEM30B-203ENST00000557163 UNC13BO14795 1591 aa27.87■■■□□ 2.05
TMEM30B-203ENST00000557163 VWDEQ8N2E2 1590 aa27.87■■■□□ 2.05
TMEM30B-203ENST00000557163 MED14O60244 1454 aa27.87■■■□□ 2.05
TMEM30B-203ENST00000557163 LMTK2Q8IWU2 1503 aa27.87■■■□□ 2.05
TMEM30B-203ENST00000557163 UBR1Q8IWV7 1749 aa27.87■■■□□ 2.05
TMEM30B-203ENST00000557163 IQGAP1P46940 1657 aa27.84■■■□□ 2.05
TMEM30B-203ENST00000557163 CPS1P31327 1500 aa27.82■■■□□ 2.04
TMEM30B-203ENST00000557163 HFM1A2PYH4 1435 aa27.81■■■□□ 2.04
TMEM30B-203ENST00000557163 ACIN1Q9UKV3 1341 aaKnown RBP27.78■■■□□ 2.04
TMEM30B-203ENST00000557163 TET3O43151 1660 aa27.78■■■□□ 2.04
TMEM30B-203ENST00000557163 PIK3C2BO00750 1634 aa27.78■■■□□ 2.04
TMEM30B-203ENST00000557163 NAIPQ13075 1403 aa27.77■■■□□ 2.04
TMEM30B-203ENST00000557163 TXNDC2Q86VQ3 553 aa27.77■■■□□ 2.04
TMEM30B-203ENST00000557163 STAG3Q9UJ98 1225 aa27.77■■■□□ 2.04
TMEM30B-203ENST00000557163 IQGAP3Q86VI3 1631 aa27.77■■■□□ 2.04
TMEM30B-203ENST00000557163 SCAF11Q99590 1463 aaKnown RBP27.76■■■□□ 2.04
TMEM30B-203ENST00000557163 LTKP29376 864 aa27.76■■■□□ 2.03
TMEM30B-203ENST00000557163 RPRD2Q5VT52 1461 aaKnown RBP27.76■■■□□ 2.03
TMEM30B-203ENST00000557163 EFCAB6Q5THR3 1501 aa27.75■■■□□ 2.03
TMEM30B-203ENST00000557163 SLIT1O75093 1534 aa27.74■■■□□ 2.03
TMEM30B-203ENST00000557163 ARHGAP23Q9P227 1491 aa27.74■■■□□ 2.03
TMEM30B-203ENST00000557163 DISP3Q9P2K9 1392 aa27.73■■■□□ 2.03
TMEM30B-203ENST00000557163 IDI1Q13907 227 aa27.73■■■□□ 2.03
TMEM30B-203ENST00000557163 SCAF1Q9H7N4 1312 aaKnown RBP27.72■■■□□ 2.03
TMEM30B-203ENST00000557163 EID1Q9Y6B2 187 aa27.72■■■□□ 2.03
TMEM30B-203ENST00000557163 SYNMO15061 1565 aa27.71■■■□□ 2.03
TMEM30B-203ENST00000557163 TOM1O60784 492 aa27.7■■■□□ 2.02
TMEM30B-203ENST00000557163 PIP4K2BP78356 416 aa27.7■■■□□ 2.02
TMEM30B-203ENST00000557163 STRCP1A6NGW2 1772 aa27.7■■■□□ 2.02
TMEM30B-203ENST00000557163 TMEM2Q9UHN6 1383 aa27.69■■■□□ 2.02
TMEM30B-203ENST00000557163 NOS1P29475 1434 aa27.68■■■□□ 2.02
TMEM30B-203ENST00000557163 NUP155O75694 1391 aa27.68■■■□□ 2.02
TMEM30B-203ENST00000557163 KDM5AP29375 1690 aaKnown RBP27.65■■■□□ 2.02
TMEM30B-203ENST00000557163 LRRC7Q96NW7 1537 aa27.63■■■□□ 2.01
TMEM30B-203ENST00000557163 SLC52A1Q9NWF4 448 aa27.63■■■□□ 2.01
TMEM30B-203ENST00000557163 ADGRB3O60242 1522 aa27.61■■■□□ 2.01
TMEM30B-203ENST00000557163 E9PCH4 1651 aa27.6■■■□□ 2.01
TMEM30B-203ENST00000557163 HSPA1LP34931 641 aa27.59■■■□□ 2.01
TMEM30B-203ENST00000557163 ILDR2Q71H61 639 aa27.55■■■□□ 2
TMEM30B-203ENST00000557163 SETD5Q9C0A6 1442 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms