RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 CAMSAP2Q08AD1 1489 aa16.98■□□□□ 0.31
APEX1-216ENST00000557159 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
APEX1-216ENST00000557159 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
APEX1-216ENST00000557159 RPRD2Q5VT52 1461 aaKnown RBP16.96■□□□□ 0.31
APEX1-216ENST00000557159 COL17A1Q9UMD9 1497 aaPredicted RBP16.96■□□□□ 0.31
APEX1-216ENST00000557159 HNRNPMP52272 730 aaKnown RBP eCLIP16.96■□□□□ 0.31
APEX1-216ENST00000557159 ABCC1P33527 1531 aa16.96■□□□□ 0.31
APEX1-216ENST00000557159 MBD5Q9P267 1494 aa16.96■□□□□ 0.31
APEX1-216ENST00000557159 NUDCQ9Y266 331 aa16.96■□□□□ 0.3
APEX1-216ENST00000557159 PAK3O75914 559 aaPredicted RBP16.95■□□□□ 0.3
APEX1-216ENST00000557159 PRKCSHP14314 528 aaPredicted RBP16.95■□□□□ 0.3
APEX1-216ENST00000557159 RSPH4AQ5TD94 716 aa16.94■□□□□ 0.3
APEX1-216ENST00000557159 MPHOSPH9Q99550 1183 aa16.94■□□□□ 0.3
APEX1-216ENST00000557159 SYCP2Q9BX26 1530 aa16.94■□□□□ 0.3
APEX1-216ENST00000557159 RAPGEF3O95398 923 aa16.93■□□□□ 0.3
APEX1-216ENST00000557159 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
APEX1-216ENST00000557159 AFAP1Q8N556 730 aa16.93■□□□□ 0.3
APEX1-216ENST00000557159 ADGBQ8N7X0 1667 aa16.93■□□□□ 0.3
APEX1-216ENST00000557159 ADGRL2O95490 1459 aa16.92■□□□□ 0.3
APEX1-216ENST00000557159 TRAPPC8Q9Y2L5 1435 aa16.92■□□□□ 0.3
APEX1-216ENST00000557159 ARID4BQ4LE39 1312 aaPredicted RBP16.92■□□□□ 0.3
APEX1-216ENST00000557159 RTL5Q5HYW3 569 aaPredicted RBP16.92■□□□□ 0.3
APEX1-216ENST00000557159 USP35Q9P2H5 1018 aa16.92■□□□□ 0.3
APEX1-216ENST00000557159 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
APEX1-216ENST00000557159 POGZQ7Z3K3 1410 aa16.91■□□□□ 0.3
APEX1-216ENST00000557159 ZBTB47Q9UFB7 747 aaPredicted RBP16.91■□□□□ 0.3
APEX1-216ENST00000557159 ZNF518AQ6AHZ1 1483 aa16.9■□□□□ 0.3
APEX1-216ENST00000557159 ANKRD30BQ9BXX2 1392 aa16.9■□□□□ 0.3
APEX1-216ENST00000557159 L3MBTL2Q969R5 705 aa16.9■□□□□ 0.3
APEX1-216ENST00000557159 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
APEX1-216ENST00000557159 KIF7Q2M1P5 1343 aa16.89■□□□□ 0.3
APEX1-216ENST00000557159 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.29
APEX1-216ENST00000557159 KDM6BO15054 1643 aa16.89■□□□□ 0.29
APEX1-216ENST00000557159 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
APEX1-216ENST00000557159 SHANK2Q9UPX8 1470 aa16.89■□□□□ 0.29
APEX1-216ENST00000557159 DHX29Q7Z478 1369 aaKnown RBP16.88■□□□□ 0.29
APEX1-216ENST00000557159 CCDC136Q96JN2 1154 aa16.88■□□□□ 0.29
APEX1-216ENST00000557159 RICTORQ6R327 1708 aa16.88■□□□□ 0.29
APEX1-216ENST00000557159 CCDC141Q6ZP82 1450 aa16.87■□□□□ 0.29
APEX1-216ENST00000557159 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
APEX1-216ENST00000557159 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
APEX1-216ENST00000557159 NBR1Q14596 966 aa16.86■□□□□ 0.29
APEX1-216ENST00000557159 FRMPD1Q5SYB0 1578 aa16.86■□□□□ 0.29
APEX1-216ENST00000557159 KDM5CP41229 1560 aa16.86■□□□□ 0.29
APEX1-216ENST00000557159 KDM4FA0A1W2PPD8 638 aa16.86■□□□□ 0.29
APEX1-216ENST00000557159 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.29
APEX1-216ENST00000557159 MLH3Q9UHC1 1453 aa16.83■□□□□ 0.28
APEX1-216ENST00000557159 ZMYM4Q5VZL5 1548 aa16.83■□□□□ 0.28
APEX1-216ENST00000557159 ROCK2O75116 1388 aaKnown RBP16.82■□□□□ 0.28
APEX1-216ENST00000557159 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
APEX1-216ENST00000557159 TCERG1O14776 1098 aaKnown RBP16.82■□□□□ 0.28
APEX1-216ENST00000557159 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
APEX1-216ENST00000557159 RTEL1-TNFRSF6BF6WH68 1400 aa16.81■□□□□ 0.28
APEX1-216ENST00000557159 MAGI2Q86UL8 1455 aa16.81■□□□□ 0.28
APEX1-216ENST00000557159 NBPF8Q3BBV2 869 aa16.81■□□□□ 0.28
APEX1-216ENST00000557159 C9orf84Q5VXU9 1444 aa16.81■□□□□ 0.28
APEX1-216ENST00000557159 MS4A1P11836 297 aa16.8■□□□□ 0.28
APEX1-216ENST00000557159 LRPPRCP42704 1394 aaKnown RBP16.79■□□□□ 0.28
APEX1-216ENST00000557159 ANKRD50Q9ULJ7 1429 aa16.79■□□□□ 0.28
APEX1-216ENST00000557159 WASHC2CQ9Y4E1 1318 aa16.79■□□□□ 0.28
APEX1-216ENST00000557159 HECW2Q9P2P5 1572 aa16.79■□□□□ 0.28
APEX1-216ENST00000557159 MAST1Q9Y2H9 1570 aa16.79■□□□□ 0.28
APEX1-216ENST00000557159 ZFYVE16Q7Z3T8 1539 aa16.78■□□□□ 0.28
APEX1-216ENST00000557159 KIDINS220Q9ULH0 1771 aa16.78■□□□□ 0.28
APEX1-216ENST00000557159 ATP7AQ04656 1500 aa16.78■□□□□ 0.28
APEX1-216ENST00000557159 INO80Q9ULG1 1556 aaPredicted RBP16.77■□□□□ 0.28
APEX1-216ENST00000557159 YEATS2Q9ULM3 1422 aa16.77■□□□□ 0.28
APEX1-216ENST00000557159 PPM1GO15355 546 aaPredicted RBP16.76■□□□□ 0.27
APEX1-216ENST00000557159 PNISRQ8TF01 805 aaKnown RBP16.76■□□□□ 0.27
APEX1-216ENST00000557159 BCORL1Q5H9F3 1711 aa16.76■□□□□ 0.27
APEX1-216ENST00000557159 PZPP20742 1482 aa16.75■□□□□ 0.27
APEX1-216ENST00000557159 BRD4O60885 1362 aaPredicted RBP16.73■□□□□ 0.27
APEX1-216ENST00000557159 INSRP06213 1382 aa16.73■□□□□ 0.27
APEX1-216ENST00000557159 UHRF1BP1Q6BDS2 1440 aa16.72■□□□□ 0.27
APEX1-216ENST00000557159 PLXNC1O60486 1568 aa16.72■□□□□ 0.27
APEX1-216ENST00000557159 KDM5DQ9BY66 1539 aa16.72■□□□□ 0.27
APEX1-216ENST00000557159 KIF15Q9NS87 1388 aa16.71■□□□□ 0.27
APEX1-216ENST00000557159 ABCA6Q8N139 1617 aa16.71■□□□□ 0.27
APEX1-216ENST00000557159 DIP2CQ9Y2E4 1556 aa16.71■□□□□ 0.27
APEX1-216ENST00000557159 ARHGEF40Q8TER5 1519 aa16.71■□□□□ 0.27
APEX1-216ENST00000557159 ATP10AO60312 1499 aa16.71■□□□□ 0.27
APEX1-216ENST00000557159 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
APEX1-216ENST00000557159 BACH2Q9BYV9 841 aa16.7■□□□□ 0.26
APEX1-216ENST00000557159 RRP1P56182 461 aaKnown RBP16.7■□□□□ 0.26
APEX1-216ENST00000557159 ANO8Q9HCE9 1232 aaPredicted RBP16.7■□□□□ 0.26
APEX1-216ENST00000557159 USP47Q96K76 1375 aa16.69■□□□□ 0.26
APEX1-216ENST00000557159 FOXD1Q16676 465 aa16.69■□□□□ 0.26
APEX1-216ENST00000557159 E9PCH4 1651 aa16.69■□□□□ 0.26
APEX1-216ENST00000557159 A2MP01023 1474 aa16.68■□□□□ 0.26
APEX1-216ENST00000557159 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
APEX1-216ENST00000557159 PDE4AP27815 886 aa16.68■□□□□ 0.26
APEX1-216ENST00000557159 NUP155O75694 1391 aa16.67■□□□□ 0.26
APEX1-216ENST00000557159 PKD2Q13563 968 aa16.67■□□□□ 0.26
APEX1-216ENST00000557159 DUOX2Q9NRD8 1548 aa16.66■□□□□ 0.26
APEX1-216ENST00000557159 RALBP1Q15311 655 aa16.66■□□□□ 0.26
APEX1-216ENST00000557159 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
APEX1-216ENST00000557159 REREQ9P2R6 1566 aa16.66■□□□□ 0.26
APEX1-216ENST00000557159 NEFMP07197 916 aa16.64■□□□□ 0.25
APEX1-216ENST00000557159 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
APEX1-216ENST00000557159 MYBBP1AQ9BQG0 1328 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms