RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SETD1BQ9UPS6 1966 aaKnown RBP9.95□□□□□ -0.82
ATXN3-245ENST00000556958 PTPRKQ15262 1439 aa9.94□□□□□ -0.82
ATXN3-245ENST00000556958 PHF12Q96QT6 1004 aa9.94□□□□□ -0.82
ATXN3-245ENST00000556958 POTEJP0CG39 1038 aa9.93□□□□□ -0.82
ATXN3-245ENST00000556958 FER1L4A9Z1Z3 1794 aa9.93□□□□□ -0.82
ATXN3-245ENST00000556958 CNTLNQ9NXG0 1405 aa9.92□□□□□ -0.82
ATXN3-245ENST00000556958 AFAP1Q8N556 730 aa9.91□□□□□ -0.82
ATXN3-245ENST00000556958 HECW1Q76N89 1606 aa9.91□□□□□ -0.82
ATXN3-245ENST00000556958 NPATQ14207 1427 aa9.9□□□□□ -0.82
ATXN3-245ENST00000556958 POTEAQ6S8J7 498 aa9.9□□□□□ -0.82
ATXN3-245ENST00000556958 RICTORQ6R327 1708 aa9.9□□□□□ -0.83
ATXN3-245ENST00000556958 PLCH2O75038 1416 aa9.9□□□□□ -0.83
ATXN3-245ENST00000556958 CAMSAP1Q5T5Y3 1602 aa9.89□□□□□ -0.83
ATXN3-245ENST00000556958 CFAP74Q9C0B2 1584 aa9.89□□□□□ -0.83
ATXN3-245ENST00000556958 PLA2R1Q13018 1463 aa9.89□□□□□ -0.83
ATXN3-245ENST00000556958 METRNQ9UJH8 293 aa9.88□□□□□ -0.83
ATXN3-245ENST00000556958 ZMYM3Q14202 1370 aa9.88□□□□□ -0.83
ATXN3-245ENST00000556958 CPS1P31327 1500 aa9.87□□□□□ -0.83
ATXN3-245ENST00000556958 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
ATXN3-245ENST00000556958 ZNF518AQ6AHZ1 1483 aa9.85□□□□□ -0.83
ATXN3-245ENST00000556958 SIGLEC1Q9BZZ2 1709 aa9.85□□□□□ -0.83
ATXN3-245ENST00000556958 NUP153P49790 1475 aaKnown RBP9.85□□□□□ -0.83
ATXN3-245ENST00000556958 AGLP35573 1532 aa9.84□□□□□ -0.83
ATXN3-245ENST00000556958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATXN3-245ENST00000556958 PAK3O75914 559 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-245ENST00000556958 ASTLQ6HA08 431 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-245ENST00000556958 UPF1Q92900 1129 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATXN3-245ENST00000556958 CDK11AQ9UQ88 783 aaPredicted RBP9.84□□□□□ -0.83
ATXN3-245ENST00000556958 SHANK2Q9UPX8 1470 aa9.84□□□□□ -0.83
ATXN3-245ENST00000556958 ANKLE2Q86XL3 938 aa9.83□□□□□ -0.84
ATXN3-245ENST00000556958 FAM163AQ96GL9 167 aaPredicted RBP9.82□□□□□ -0.84
ATXN3-245ENST00000556958 ATMINO43313 823 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-245ENST00000556958 SLC39A7Q92504 469 aa9.81□□□□□ -0.84
ATXN3-245ENST00000556958 C7P10643 843 aa9.8□□□□□ -0.84
ATXN3-245ENST00000556958 MAMSTRQ6ZN01 415 aa9.8□□□□□ -0.84
ATXN3-245ENST00000556958 RAPGEF6Q8TEU7 1601 aa9.8□□□□□ -0.84
ATXN3-245ENST00000556958 MLH3Q9UHC1 1453 aa9.79□□□□□ -0.84
ATXN3-245ENST00000556958 THEMISQ8N1K5 641 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-245ENST00000556958 MS4A3Q96HJ5 214 aa9.79□□□□□ -0.84
ATXN3-245ENST00000556958 RANGAP1P46060 587 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-245ENST00000556958 PRXQ9BXM0 1461 aa9.78□□□□□ -0.84
ATXN3-245ENST00000556958 REREQ9P2R6 1566 aa9.77□□□□□ -0.85
ATXN3-245ENST00000556958 C3P01024 1663 aa9.77□□□□□ -0.85
ATXN3-245ENST00000556958 GGT6Q6P531 493 aa9.76□□□□□ -0.85
ATXN3-245ENST00000556958 STAG3Q9UJ98 1225 aa9.76□□□□□ -0.85
ATXN3-245ENST00000556958 ATP1B4Q9UN42 357 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-245ENST00000556958 ZNF772Q68DY9 489 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-245ENST00000556958 SCUBE2Q9NQ36 999 aa9.74□□□□□ -0.85
ATXN3-245ENST00000556958 SRCAPQ6ZRS2 3230 aa9.73□□□□□ -0.85
ATXN3-245ENST00000556958 A2ML1A8K2U0 1454 aa9.73□□□□□ -0.85
ATXN3-245ENST00000556958 KDM5CP41229 1560 aa9.73□□□□□ -0.85
ATXN3-245ENST00000556958 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-245ENST00000556958 CTTNBP2Q8WZ74 1663 aa9.73□□□□□ -0.85
ATXN3-245ENST00000556958 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
ATXN3-245ENST00000556958 DIP2CQ9Y2E4 1556 aa9.72□□□□□ -0.85
ATXN3-245ENST00000556958 CEP170BQ9Y4F5 1589 aaPredicted RBP9.71□□□□□ -0.85
ATXN3-245ENST00000556958 TRIM52Q96A61 297 aa9.71□□□□□ -0.86
ATXN3-245ENST00000556958 SPAG9O60271 1321 aaKnown RBP9.71□□□□□ -0.86
ATXN3-245ENST00000556958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.71□□□□□ -0.86
ATXN3-245ENST00000556958 NPHP4O75161 1426 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-245ENST00000556958 RXRBP28702 533 aa9.7□□□□□ -0.86
ATXN3-245ENST00000556958 ARHGAP5Q13017 1502 aa9.7□□□□□ -0.86
ATXN3-245ENST00000556958 POTEFA5A3E0 1075 aa9.69□□□□□ -0.86
ATXN3-245ENST00000556958 ATN1P54259 1190 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-245ENST00000556958 CDAN1Q8IWY9 1227 aa9.69□□□□□ -0.86
ATXN3-245ENST00000556958 ALKQ9UM73 1620 aa9.68□□□□□ -0.86
ATXN3-245ENST00000556958 LRRC7Q96NW7 1537 aa9.68□□□□□ -0.86
ATXN3-245ENST00000556958 TNRQ92752 1358 aa9.68□□□□□ -0.86
ATXN3-245ENST00000556958 MEX3CQ5U5Q3 659 aaKnown RBP9.68□□□□□ -0.86
ATXN3-245ENST00000556958 SAMD9Q5K651 1589 aa9.67□□□□□ -0.86
ATXN3-245ENST00000556958 CLIP1P30622 1438 aa9.67□□□□□ -0.86
ATXN3-245ENST00000556958 FBXO31Q5XUX0 539 aaPredicted RBP9.67□□□□□ -0.86
ATXN3-245ENST00000556958 MED14O60244 1454 aa9.66□□□□□ -0.86
ATXN3-245ENST00000556958 JCADQ9P266 1359 aa9.65□□□□□ -0.86
ATXN3-245ENST00000556958 VWDEQ8N2E2 1590 aa9.65□□□□□ -0.86
ATXN3-245ENST00000556958 ZNF777Q9ULD5 760 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-245ENST00000556958 FAM135AQ9P2D6 1515 aa9.64□□□□□ -0.87
ATXN3-245ENST00000556958 MROH2AA6NES4 1674 aa9.64□□□□□ -0.87
ATXN3-245ENST00000556958 TROQ12816 1431 aaPredicted RBP9.64□□□□□ -0.87
ATXN3-245ENST00000556958 ABCA6Q8N139 1617 aa9.64□□□□□ -0.87
ATXN3-245ENST00000556958 MYO3AQ8NEV4 1616 aa9.64□□□□□ -0.87
ATXN3-245ENST00000556958 CDK13Q14004 1512 aaKnown RBP9.63□□□□□ -0.87
ATXN3-245ENST00000556958 ZNF142P52746 1687 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-245ENST00000556958 DNMT1P26358 1616 aaKnown RBP9.63□□□□□ -0.87
ATXN3-245ENST00000556958 SPATA31A6Q5VVP1 1343 aa9.62□□□□□ -0.87
ATXN3-245ENST00000556958 HNRNPMP52272 730 aaKnown RBP eCLIP9.62□□□□□ -0.87
ATXN3-245ENST00000556958 MIA2Q96PC5 1412 aa9.62□□□□□ -0.87
ATXN3-245ENST00000556958 WASHC2CQ9Y4E1 1318 aa9.61□□□□□ -0.87
ATXN3-245ENST00000556958 A2MP01023 1474 aa9.61□□□□□ -0.87
ATXN3-245ENST00000556958 NEURL4Q96JN8 1562 aa9.61□□□□□ -0.87
ATXN3-245ENST00000556958 ABCC1P33527 1531 aa9.6□□□□□ -0.87
ATXN3-245ENST00000556958 RNF17Q9BXT8 1623 aaKnown RBP9.6□□□□□ -0.87
ATXN3-245ENST00000556958 NLRP1Q9C000 1473 aa9.59□□□□□ -0.87
ATXN3-245ENST00000556958 NUTM2BA6NNL0 878 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-245ENST00000556958 NUTM2EB1AL46 878 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-245ENST00000556958 NUTM2DQ5VT03 806 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-245ENST00000556958 PROSER2Q86WR7 435 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-245ENST00000556958 NUTM2AQ8IVF1 878 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-245ENST00000556958 RBM33Q96EV2 1170 aaKnown RBP9.59□□□□□ -0.87
ATXN3-245ENST00000556958 SLAIN2Q9P270 581 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms