RNA–Protein interactions for RNA: ENST00000556895.5

LINC01578-207, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-207ENST00000556895 PTPRKQ15262 1439 aa44■■■■■ 4.63
LINC01578-207ENST00000556895 RNF17Q9BXT8 1623 aaKnown RBP44■■■■■ 4.63
LINC01578-207ENST00000556895 DAPK1P53355 1430 aa43.99■■■■■ 4.63
LINC01578-207ENST00000556895 MYO3AQ8NEV4 1616 aa43.98■■■■■ 4.63
LINC01578-207ENST00000556895 STRCQ7RTU9 1775 aa43.97■■■■■ 4.63
LINC01578-207ENST00000556895 DUOX2Q9NRD8 1548 aa43.95■■■■■ 4.63
LINC01578-207ENST00000556895 ZNF142P52746 1687 aaPredicted RBP43.91■■■■■ 4.62
LINC01578-207ENST00000556895 KIF15Q9NS87 1388 aa43.89■■■■■ 4.62
LINC01578-207ENST00000556895 WASHC2CQ9Y4E1 1318 aa43.87■■■■■ 4.61
LINC01578-207ENST00000556895 MROH1Q8NDA8 1641 aa43.87■■■■■ 4.61
LINC01578-207ENST00000556895 ZC3H13Q5T200 1668 aaKnown RBP43.86■■■■■ 4.61
LINC01578-207ENST00000556895 PZPP20742 1482 aa43.84■■■■■ 4.61
LINC01578-207ENST00000556895 CEP170BQ9Y4F5 1589 aaPredicted RBP43.84■■■■■ 4.61
LINC01578-207ENST00000556895 ABCC3O15438 1527 aa43.81■■■■■ 4.6
LINC01578-207ENST00000556895 RRP7BPQ9NSQ0 103 aa43.8■■■■■ 4.6
LINC01578-207ENST00000556895 ERBINQ96RT1 1412 aa43.8■■■■■ 4.6
LINC01578-207ENST00000556895 CAMSAP1Q5T5Y3 1602 aa43.8■■■■■ 4.6
LINC01578-207ENST00000556895 ILDR1Q86SU0 546 aaPredicted RBP43.79■■■■■ 4.6
LINC01578-207ENST00000556895 FAM50AQ14320 339 aaKnown RBP43.78■■■■■ 4.6
LINC01578-207ENST00000556895 CEP152O94986 1710 aa43.78■■■■■ 4.6
LINC01578-207ENST00000556895 NCOA1Q15788 1441 aa43.77■■■■■ 4.6
LINC01578-207ENST00000556895 CHIC2Q9UKJ5 165 aa43.76■■■■■ 4.6
LINC01578-207ENST00000556895 FBXO31Q5XUX0 539 aaPredicted RBP43.74■■■■■ 4.59
LINC01578-207ENST00000556895 ANKRD30AQ9BXX3 1397 aa43.74■■■■■ 4.59
LINC01578-207ENST00000556895 PRDM15P57071 1507 aaPredicted RBP43.73■■■■■ 4.59
LINC01578-207ENST00000556895 TNRQ92752 1358 aa43.71■■■■■ 4.59
LINC01578-207ENST00000556895 DMRT2Q9Y5R5 561 aa43.7■■■■■ 4.59
LINC01578-207ENST00000556895 A2ML1A8K2U0 1454 aa43.7■■■■■ 4.59
LINC01578-207ENST00000556895 ADGRL2O95490 1459 aa43.7■■■■■ 4.59
LINC01578-207ENST00000556895 DEPDC5O75140 1603 aa43.69■■■■■ 4.58
LINC01578-207ENST00000556895 PTPRTO14522 1441 aa43.65■■■■■ 4.58
LINC01578-207ENST00000556895 PPARGC1BQ86YN6 1023 aaKnown RBP43.64■■■■■ 4.58
LINC01578-207ENST00000556895 PLA2R1Q13018 1463 aa43.63■■■■■ 4.57
LINC01578-207ENST00000556895 SPATA31D1Q6ZQQ2 1576 aa43.59■■■■■ 4.57
LINC01578-207ENST00000556895 ERVK-7P63135 1459 aa43.56■■■■■ 4.56
LINC01578-207ENST00000556895 NCKAP5LQ9HCH0 1330 aa43.54■■■■■ 4.56
LINC01578-207ENST00000556895 NLRP1Q9C000 1473 aa43.54■■■■■ 4.56
LINC01578-207ENST00000556895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.53■■■■■ 4.56
LINC01578-207ENST00000556895 CFAP65Q6ZU64 1925 aaKnown RBP43.52■■■■■ 4.56
LINC01578-207ENST00000556895 FBXO41Q8TF61 875 aa43.51■■■■■ 4.56
LINC01578-207ENST00000556895 KANK1Q14678 1352 aa43.49■■■■■ 4.55
LINC01578-207ENST00000556895 VWDEQ8N2E2 1590 aa43.48■■■■■ 4.55
LINC01578-207ENST00000556895 UGGT1Q9NYU2 1555 aa43.46■■■■■ 4.55
LINC01578-207ENST00000556895 POLR1AO95602 1720 aaPredicted RBP43.46■■■■■ 4.55
LINC01578-207ENST00000556895 CERKQ8TCT0 537 aa43.46■■■■■ 4.55
LINC01578-207ENST00000556895 ARHGAP31Q2M1Z3 1444 aa43.46■■■■■ 4.55
LINC01578-207ENST00000556895 PKD2Q13563 968 aa43.45■■■■■ 4.55
LINC01578-207ENST00000556895 ANKRD50Q9ULJ7 1429 aa43.44■■■■■ 4.54
LINC01578-207ENST00000556895 LMTK2Q8IWU2 1503 aa43.43■■■■■ 4.54
LINC01578-207ENST00000556895 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.37■■■■■ 4.538e-11■□□□□ 10.9
LINC01578-207ENST00000556895 NEURL4Q96JN8 1562 aa43.37■■■■■ 4.53
LINC01578-207ENST00000556895 LTBP4Q8N2S1 1624 aa43.36■■■■■ 4.53
LINC01578-207ENST00000556895 ROCK1Q13464 1354 aa43.34■■■■■ 4.53
LINC01578-207ENST00000556895 EFCAB6Q5THR3 1501 aa43.32■■■■■ 4.53
LINC01578-207ENST00000556895 THEMISQ8N1K5 641 aaPredicted RBP43.32■■■■■ 4.53
LINC01578-207ENST00000556895 UBR1Q8IWV7 1749 aa43.31■■■■■ 4.52
LINC01578-207ENST00000556895 ITGAEP38570 1179 aa43.31■■■■■ 4.52
LINC01578-207ENST00000556895 UNC13BO14795 1591 aa43.29■■■■■ 4.52
LINC01578-207ENST00000556895 RRBP1Q9P2E9 1410 aaKnown RBP43.25■■■■■ 4.51
LINC01578-207ENST00000556895 ANKLE2Q86XL3 938 aa43.22■■■■■ 4.51
LINC01578-207ENST00000556895 PIK3C2BO00750 1634 aa43.22■■■■■ 4.51
LINC01578-207ENST00000556895 ZNF335Q9H4Z2 1342 aaPredicted RBP43.22■■■■■ 4.51
LINC01578-207ENST00000556895 TET3O43151 1660 aa43.21■■■■■ 4.51
LINC01578-207ENST00000556895 SYNMO15061 1565 aa43.2■■■■■ 4.51
LINC01578-207ENST00000556895 GCC2Q8IWJ2 1684 aa43.17■■■■■ 4.5
LINC01578-207ENST00000556895 MED14O60244 1454 aa43.15■■■■■ 4.5
LINC01578-207ENST00000556895 IQGAP1P46940 1657 aa43.14■■■■■ 4.5
LINC01578-207ENST00000556895 NPHP4O75161 1426 aaPredicted RBP43.14■■■■■ 4.5
LINC01578-207ENST00000556895 NOS1P29475 1434 aa43.14■■■■■ 4.5
LINC01578-207ENST00000556895 RPRD2Q5VT52 1461 aaKnown RBP43.12■■■■■ 4.49
LINC01578-207ENST00000556895 IQGAP3Q86VI3 1631 aa43.11■■■■■ 4.49
LINC01578-207ENST00000556895 IQSEC2Q5JU85 1478 aa43.1■■■■■ 4.49
LINC01578-207ENST00000556895 KDM5AP29375 1690 aaKnown RBP43.08■■■■■ 4.49
LINC01578-207ENST00000556895 SLIT1O75093 1534 aa43.08■■■■■ 4.49
LINC01578-207ENST00000556895 ARHGAP23Q9P227 1491 aa43.07■■■■■ 4.49
LINC01578-207ENST00000556895 E9PCH4 1651 aa43.05■■■■■ 4.48
LINC01578-207ENST00000556895 SCAF11Q99590 1463 aaKnown RBP43.03■■■■■ 4.48
LINC01578-207ENST00000556895 IDI1Q13907 227 aa43.02■■■■■ 4.48
LINC01578-207ENST00000556895 ADGRB3O60242 1522 aa43.01■■■■■ 4.48
LINC01578-207ENST00000556895 STAG3Q9UJ98 1225 aa42.99■■■■■ 4.47
LINC01578-207ENST00000556895 NUP155O75694 1391 aa42.96■■■■■ 4.47
LINC01578-207ENST00000556895 TMEM2Q9UHN6 1383 aa42.94■■■■■ 4.46
LINC01578-207ENST00000556895 CPS1P31327 1500 aa42.94■■■■■ 4.46
LINC01578-207ENST00000556895 LTKP29376 864 aa42.94■■■■■ 4.46
LINC01578-207ENST00000556895 TXNDC2Q86VQ3 553 aa42.92■■■■■ 4.46
LINC01578-207ENST00000556895 SLC52A1Q9NWF4 448 aa42.92■■■■■ 4.46
LINC01578-207ENST00000556895 NAIPQ13075 1403 aa42.89■■■■■ 4.46
LINC01578-207ENST00000556895 MYO5BQ9ULV0 1848 aa42.89■■■■■ 4.46
LINC01578-207ENST00000556895 EID1Q9Y6B2 187 aa42.88■■■■■ 4.45
LINC01578-207ENST00000556895 STRCP1A6NGW2 1772 aa42.85■■■■■ 4.45
LINC01578-207ENST00000556895 TMEM131LA2VDJ0 1609 aa42.82■■■■■ 4.44
LINC01578-207ENST00000556895 HFM1A2PYH4 1435 aa42.79■■■■■ 4.44
LINC01578-207ENST00000556895 SPHKAPQ2M3C7 1700 aa42.75■■■■■ 4.43
LINC01578-207ENST00000556895 UBAP1LF5GYI3 381 aa42.72■■■■■ 4.43
LINC01578-207ENST00000556895 ZFYVE9O95405 1425 aa42.7■■■■■ 4.43
LINC01578-207ENST00000556895 LRRC7Q96NW7 1537 aa42.66■■■■■ 4.42
LINC01578-207ENST00000556895 RIMS2Q9UQ26 1411 aa42.66■■■■■ 4.42
LINC01578-207ENST00000556895 CHGAP10645 457 aaKnown RBP42.66■■■■■ 4.42
LINC01578-207ENST00000556895 SLC26A8Q96RN1 970 aa42.57■■■■■ 4.41
LINC01578-207ENST00000556895 TRIM52Q96A61 297 aa42.56■■■■■ 4.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms