RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 MIA2Q96PC5 1412 aa27■■□□□ 1.91
CHGA-206ENST00000556876 APLP2Q06481 763 aa27■■□□□ 1.91
CHGA-206ENST00000556876 CEP170BQ9Y4F5 1589 aaPredicted RBP27■■□□□ 1.91
CHGA-206ENST00000556876 A2ML1A8K2U0 1454 aa27■■□□□ 1.91
CHGA-206ENST00000556876 TNRQ92752 1358 aa26.99■■□□□ 1.91
CHGA-206ENST00000556876 TCOF1Q13428 1488 aaKnown RBP26.99■■□□□ 1.91
CHGA-206ENST00000556876 LTBP4Q8N2S1 1624 aa26.98■■□□□ 1.91
CHGA-206ENST00000556876 KDM5DQ9BY66 1539 aa26.97■■□□□ 1.91
CHGA-206ENST00000556876 THEMISQ8N1K5 641 aaPredicted RBP26.97■■□□□ 1.91
CHGA-206ENST00000556876 PZPP20742 1482 aa26.97■■□□□ 1.91
CHGA-206ENST00000556876 ZNF142P52746 1687 aaPredicted RBP26.96■■□□□ 1.91
CHGA-206ENST00000556876 MYO3AQ8NEV4 1616 aa26.96■■□□□ 1.91
CHGA-206ENST00000556876 FBXO31Q5XUX0 539 aaPredicted RBP26.94■■□□□ 1.9
CHGA-206ENST00000556876 MYOM3Q5VTT5 1437 aa26.93■■□□□ 1.9
CHGA-206ENST00000556876 KANK4Q5T7N3 995 aaPredicted RBP26.93■■□□□ 1.9
CHGA-206ENST00000556876 ANKLE2Q86XL3 938 aa26.92■■□□□ 1.9
CHGA-206ENST00000556876 ZNF335Q9H4Z2 1342 aaPredicted RBP26.9■■□□□ 1.9
CHGA-206ENST00000556876 NLRP1Q9C000 1473 aa26.9■■□□□ 1.9
CHGA-206ENST00000556876 MAST1Q9Y2H9 1570 aa26.87■■□□□ 1.89
CHGA-206ENST00000556876 DNMT1P26358 1616 aaKnown RBP26.85■■□□□ 1.89
CHGA-206ENST00000556876 UBAP1LF5GYI3 381 aa26.84■■□□□ 1.89
CHGA-206ENST00000556876 DISP3Q9P2K9 1392 aa26.8■■□□□ 1.88
CHGA-206ENST00000556876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.79■■□□□ 1.88
CHGA-206ENST00000556876 DUOX2Q9NRD8 1548 aa26.78■■□□□ 1.88
CHGA-206ENST00000556876 RNF17Q9BXT8 1623 aaKnown RBP26.76■■□□□ 1.87
CHGA-206ENST00000556876 EIF2AK4Q9P2K8 1649 aaKnown RBP26.76■■□□□ 1.87
CHGA-206ENST00000556876 UGGT1Q9NYU2 1555 aa26.76■■□□□ 1.87
CHGA-206ENST00000556876 TOM1O60784 492 aa26.76■■□□□ 1.87
CHGA-206ENST00000556876 ABCC3O15438 1527 aa26.75■■□□□ 1.87
CHGA-206ENST00000556876 CPS1P31327 1500 aa26.75■■□□□ 1.87
CHGA-206ENST00000556876 SHANK2Q9UPX8 1470 aa26.74■■□□□ 1.87
CHGA-206ENST00000556876 KIF15Q9NS87 1388 aa26.74■■□□□ 1.87
CHGA-206ENST00000556876 ZC3H13Q5T200 1668 aaKnown RBP26.73■■□□□ 1.87
CHGA-206ENST00000556876 MED14O60244 1454 aa26.73■■□□□ 1.87
CHGA-206ENST00000556876 ERBINQ96RT1 1412 aa26.73■■□□□ 1.87
CHGA-206ENST00000556876 RRP7BPQ9NSQ0 103 aa26.71■■□□□ 1.87
CHGA-206ENST00000556876 NPHP4O75161 1426 aaPredicted RBP26.71■■□□□ 1.87
CHGA-206ENST00000556876 KANK1Q14678 1352 aa26.71■■□□□ 1.87
CHGA-206ENST00000556876 ABCC5O15440 1437 aa26.7■■□□□ 1.86
CHGA-206ENST00000556876 ARHGAP31Q2M1Z3 1444 aa26.7■■□□□ 1.86
CHGA-206ENST00000556876 SPATA31D1Q6ZQQ2 1576 aa26.7■■□□□ 1.86
CHGA-206ENST00000556876 ERVK-7P63135 1459 aa26.68■■□□□ 1.86
CHGA-206ENST00000556876 ANKRD30AQ9BXX3 1397 aa26.68■■□□□ 1.86
CHGA-206ENST00000556876 DEPDC5O75140 1603 aa26.67■■□□□ 1.86
CHGA-206ENST00000556876 FGD6Q6ZV73 1430 aa26.65■■□□□ 1.86
CHGA-206ENST00000556876 NEURL4Q96JN8 1562 aa26.65■■□□□ 1.86
CHGA-206ENST00000556876 DAPK1P53355 1430 aa26.65■■□□□ 1.86
CHGA-206ENST00000556876 POLR1AO95602 1720 aaPredicted RBP26.64■■□□□ 1.85
CHGA-206ENST00000556876 EID1Q9Y6B2 187 aa26.63■■□□□ 1.85
CHGA-206ENST00000556876 PTPN23Q9H3S7 1636 aa26.62■■□□□ 1.85
CHGA-206ENST00000556876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.62■■□□□ 1.85
CHGA-206ENST00000556876 MROH1Q8NDA8 1641 aa26.59■■□□□ 1.85
CHGA-206ENST00000556876 SCAF1Q9H7N4 1312 aaKnown RBP26.59■■□□□ 1.85
CHGA-206ENST00000556876 PRDM15P57071 1507 aaPredicted RBP26.59■■□□□ 1.85
CHGA-206ENST00000556876 TXNDC2Q86VQ3 553 aa26.58■■□□□ 1.85
CHGA-206ENST00000556876 STAG3Q9UJ98 1225 aa26.58■■□□□ 1.85
CHGA-206ENST00000556876 SOCS7O14512 581 aa26.57■■□□□ 1.84
CHGA-206ENST00000556876 PIP4K2BP78356 416 aa26.57■■□□□ 1.84
CHGA-206ENST00000556876 CHIC2Q9UKJ5 165 aa26.56■■□□□ 1.84
CHGA-206ENST00000556876 SCAF11Q99590 1463 aaKnown RBP26.55■■□□□ 1.84
CHGA-206ENST00000556876 VWDEQ8N2E2 1590 aa26.54■■□□□ 1.84
CHGA-206ENST00000556876 ILDR2Q71H61 639 aa26.54■■□□□ 1.84
CHGA-206ENST00000556876 SLC52A1Q9NWF4 448 aa26.51■■□□□ 1.83
CHGA-206ENST00000556876 IQGAP1P46940 1657 aa26.5■■□□□ 1.83
CHGA-206ENST00000556876 SLIT1O75093 1534 aa26.5■■□□□ 1.83
CHGA-206ENST00000556876 LMTK2Q8IWU2 1503 aa26.5■■□□□ 1.83
CHGA-206ENST00000556876 HSPA1LP34931 641 aa26.5■■□□□ 1.83
CHGA-206ENST00000556876 CROCC2H7BZ55 1655 aa26.5■■□□□ 1.83
CHGA-206ENST00000556876 ARHGAP23Q9P227 1491 aa26.49■■□□□ 1.83
CHGA-206ENST00000556876 LTKP29376 864 aa26.49■■□□□ 1.83
CHGA-206ENST00000556876 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
CHGA-206ENST00000556876 TMEM2Q9UHN6 1383 aa26.48■■□□□ 1.83
CHGA-206ENST00000556876 CEP152O94986 1710 aa26.47■■□□□ 1.83
CHGA-206ENST00000556876 IDI1Q13907 227 aa26.46■■□□□ 1.83
CHGA-206ENST00000556876 ADGRL2O95490 1459 aa26.46■■□□□ 1.83
CHGA-206ENST00000556876 HDGFP51858 240 aaKnown RBP26.44■■□□□ 1.82
CHGA-206ENST00000556876 UBR1Q8IWV7 1749 aa26.44■■□□□ 1.82
CHGA-206ENST00000556876 LRRC7Q96NW7 1537 aa26.43■■□□□ 1.82
CHGA-206ENST00000556876 ANKRD50Q9ULJ7 1429 aa26.41■■□□□ 1.82
CHGA-206ENST00000556876 NOS1P29475 1434 aa26.39■■□□□ 1.82
CHGA-206ENST00000556876 RPRD2Q5VT52 1461 aaKnown RBP26.39■■□□□ 1.82
CHGA-206ENST00000556876 SYNMO15061 1565 aa26.38■■□□□ 1.81
CHGA-206ENST00000556876 EFCAB6Q5THR3 1501 aa26.38■■□□□ 1.81
CHGA-206ENST00000556876 CFAP65Q6ZU64 1925 aaKnown RBP26.36■■□□□ 1.81
CHGA-206ENST00000556876 KDM5AP29375 1690 aaKnown RBP26.36■■□□□ 1.81
CHGA-206ENST00000556876 KCNA6P17658 529 aa26.36■■□□□ 1.81
CHGA-206ENST00000556876 PIK3C2BO00750 1634 aa26.32■■□□□ 1.8
CHGA-206ENST00000556876 ROCK1Q13464 1354 aa26.32■■□□□ 1.8
CHGA-206ENST00000556876 BCANQ96GW7 911 aa26.3■■□□□ 1.8
CHGA-206ENST00000556876 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.28■■□□□ 1.8
CHGA-206ENST00000556876 PHF23Q9BUL5 403 aaPredicted RBP26.28■■□□□ 1.8
CHGA-206ENST00000556876 PROSER2Q86WR7 435 aaPredicted RBP26.26■■□□□ 1.79
CHGA-206ENST00000556876 SLC26A8Q96RN1 970 aa26.26■■□□□ 1.79
CHGA-206ENST00000556876 ADGRB3O60242 1522 aa26.25■■□□□ 1.79
CHGA-206ENST00000556876 PPP1R15AO75807 674 aaPredicted RBP26.25■■□□□ 1.79
CHGA-206ENST00000556876 ALKQ9UM73 1620 aa26.25■■□□□ 1.79
CHGA-206ENST00000556876 FAM135BQ49AJ0 1406 aa26.23■■□□□ 1.79
CHGA-206ENST00000556876 STRCP1A6NGW2 1772 aa26.23■■□□□ 1.79
CHGA-206ENST00000556876 TMEM94Q12767 1356 aa26.23■■□□□ 1.79
CHGA-206ENST00000556876 MED1Q15648 1581 aaPredicted RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms