RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 ARHGEF5Q12774 1597 aa23.52■■□□□ 1.36
CHD8-211ENST00000556833 SPATA31D1Q6ZQQ2 1576 aa23.52■■□□□ 1.36
CHD8-211ENST00000556833 LRRC9Q6ZRR7 1453 aa23.52■■□□□ 1.36
CHD8-211ENST00000556833 PKD2Q13563 968 aa23.52■■□□□ 1.36
CHD8-211ENST00000556833 PPP6R1Q9UPN7 881 aa23.52■■□□□ 1.36
CHD8-211ENST00000556833 TNRQ92752 1358 aa23.52■■□□□ 1.36
CHD8-211ENST00000556833 VPS8Q8N3P4 1428 aa23.51■■□□□ 1.35
CHD8-211ENST00000556833 ILDR2Q71H61 639 aa23.51■■□□□ 1.35
CHD8-211ENST00000556833 IQSEC2Q5JU85 1478 aa23.5■■□□□ 1.35
CHD8-211ENST00000556833 WASHC2CQ9Y4E1 1318 aa23.5■■□□□ 1.35
CHD8-211ENST00000556833 UBAP1LF5GYI3 381 aa23.49■■□□□ 1.35
CHD8-211ENST00000556833 PZPP20742 1482 aa23.49■■□□□ 1.35
CHD8-211ENST00000556833 TSPY4P0CV99 314 aa23.47■■□□□ 1.35
CHD8-211ENST00000556833 TSPY10P0CW01 314 aa23.47■■□□□ 1.35
CHD8-211ENST00000556833 KANK4Q5T7N3 995 aaPredicted RBP23.47■■□□□ 1.35
CHD8-211ENST00000556833 NEURL4Q96JN8 1562 aa23.47■■□□□ 1.35
CHD8-211ENST00000556833 CFAP65Q6ZU64 1925 aaKnown RBP23.45■■□□□ 1.35
CHD8-211ENST00000556833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.43■■□□□ 1.34
CHD8-211ENST00000556833 CEP152O94986 1710 aa23.43■■□□□ 1.34
CHD8-211ENST00000556833 RSPH4AQ5TD94 716 aa23.43■■□□□ 1.34
CHD8-211ENST00000556833 RNF17Q9BXT8 1623 aaKnown RBP23.42■■□□□ 1.34
CHD8-211ENST00000556833 FAM135AQ9P2D6 1515 aa23.41■■□□□ 1.34
CHD8-211ENST00000556833 MAST1Q9Y2H9 1570 aa23.4■■□□□ 1.34
CHD8-211ENST00000556833 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
CHD8-211ENST00000556833 UGGT1Q9NYU2 1555 aa23.4■■□□□ 1.34
CHD8-211ENST00000556833 ABCC3O15438 1527 aa23.39■■□□□ 1.34
CHD8-211ENST00000556833 MIA2Q96PC5 1412 aa23.39■■□□□ 1.33
CHD8-211ENST00000556833 MYOM3Q5VTT5 1437 aa23.38■■□□□ 1.33
CHD8-211ENST00000556833 ZC3H13Q5T200 1668 aaKnown RBP23.37■■□□□ 1.33
CHD8-211ENST00000556833 MROH1Q8NDA8 1641 aa23.37■■□□□ 1.33
CHD8-211ENST00000556833 EIF2AK4Q9P2K8 1649 aaKnown RBP23.36■■□□□ 1.33
CHD8-211ENST00000556833 PIP4K2BP78356 416 aa23.35■■□□□ 1.33
CHD8-211ENST00000556833 NLRP1Q9C000 1473 aa23.35■■□□□ 1.33
CHD8-211ENST00000556833 ANKLE2Q86XL3 938 aa23.34■■□□□ 1.33
CHD8-211ENST00000556833 CROCC2H7BZ55 1655 aa23.33■■□□□ 1.33
CHD8-211ENST00000556833 SHANK2Q9UPX8 1470 aa23.33■■□□□ 1.33
CHD8-211ENST00000556833 IQGAP1P46940 1657 aa23.32■■□□□ 1.32
CHD8-211ENST00000556833 VWDEQ8N2E2 1590 aa23.32■■□□□ 1.32
CHD8-211ENST00000556833 THEMISQ8N1K5 641 aaPredicted RBP23.32■■□□□ 1.32
CHD8-211ENST00000556833 MAP3K1Q13233 1512 aa23.32■■□□□ 1.32
CHD8-211ENST00000556833 ERVK-7P63135 1459 aa23.31■■□□□ 1.32
CHD8-211ENST00000556833 NPHP4O75161 1426 aaPredicted RBP23.31■■□□□ 1.32
CHD8-211ENST00000556833 CPS1P31327 1500 aa23.3■■□□□ 1.32
CHD8-211ENST00000556833 PTPN23Q9H3S7 1636 aa23.3■■□□□ 1.32
CHD8-211ENST00000556833 DEPDC5O75140 1603 aa23.29■■□□□ 1.32
CHD8-211ENST00000556833 DUOX2Q9NRD8 1548 aa23.28■■□□□ 1.32
CHD8-211ENST00000556833 STRCP1A6NGW2 1772 aa23.28■■□□□ 1.32
CHD8-211ENST00000556833 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
CHD8-211ENST00000556833 UBR1Q8IWV7 1749 aa23.27■■□□□ 1.32
CHD8-211ENST00000556833 KIF15Q9NS87 1388 aa23.27■■□□□ 1.31
CHD8-211ENST00000556833 SOCS7O14512 581 aa23.26■■□□□ 1.31
CHD8-211ENST00000556833 RRP7BPQ9NSQ0 103 aa23.26■■□□□ 1.31
CHD8-211ENST00000556833 HSPA1LP34931 641 aa23.25■■□□□ 1.31
CHD8-211ENST00000556833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.25■■□□□ 1.317e-9■□□□□ 8.1
CHD8-211ENST00000556833 ABCC5O15440 1437 aa23.24■■□□□ 1.31
CHD8-211ENST00000556833 MED14O60244 1454 aa23.24■■□□□ 1.31
CHD8-211ENST00000556833 APLP2Q06481 763 aa23.23■■□□□ 1.31
CHD8-211ENST00000556833 TOM1O60784 492 aa23.21■■□□□ 1.31
CHD8-211ENST00000556833 PRDM15P57071 1507 aaPredicted RBP23.21■■□□□ 1.31
CHD8-211ENST00000556833 DAPK1P53355 1430 aa23.2■■□□□ 1.3
CHD8-211ENST00000556833 CHIC2Q9UKJ5 165 aa23.2■■□□□ 1.3
CHD8-211ENST00000556833 ALKQ9UM73 1620 aa23.19■■□□□ 1.3
CHD8-211ENST00000556833 PIK3C2BO00750 1634 aa23.17■■□□□ 1.3
CHD8-211ENST00000556833 MED1Q15648 1581 aaPredicted RBP23.17■■□□□ 1.3
CHD8-211ENST00000556833 FGD6Q6ZV73 1430 aa23.16■■□□□ 1.3
CHD8-211ENST00000556833 ERBINQ96RT1 1412 aa23.16■■□□□ 1.3
CHD8-211ENST00000556833 SCAF11Q99590 1463 aaKnown RBP23.15■■□□□ 1.3
CHD8-211ENST00000556833 LRRC7Q96NW7 1537 aa23.14■■□□□ 1.3
CHD8-211ENST00000556833 LTKP29376 864 aa23.13■■□□□ 1.29
CHD8-211ENST00000556833 SYNMO15061 1565 aa23.13■■□□□ 1.29
CHD8-211ENST00000556833 TXNDC2Q86VQ3 553 aa23.11■■□□□ 1.29
CHD8-211ENST00000556833 KANK1Q14678 1352 aa23.1■■□□□ 1.29
CHD8-211ENST00000556833 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.29
CHD8-211ENST00000556833 SLIT1O75093 1534 aa23.08■■□□□ 1.29
CHD8-211ENST00000556833 XIRP1Q702N8 1843 aaKnown RBP23.08■■□□□ 1.29
CHD8-211ENST00000556833 STAG3Q9UJ98 1225 aa23.08■■□□□ 1.29
CHD8-211ENST00000556833 ARHGAP23Q9P227 1491 aa23.08■■□□□ 1.29
CHD8-211ENST00000556833 ANKRD30AQ9BXX3 1397 aa23.07■■□□□ 1.28
CHD8-211ENST00000556833 FAM50AQ14320 339 aaKnown RBP23.06■■□□□ 1.28
CHD8-211ENST00000556833 EID1Q9Y6B2 187 aa23.04■■□□□ 1.28
CHD8-211ENST00000556833 EFCAB6Q5THR3 1501 aa23.03■■□□□ 1.28
CHD8-211ENST00000556833 TMEM2Q9UHN6 1383 aa23.01■■□□□ 1.27
CHD8-211ENST00000556833 LMTK2Q8IWU2 1503 aa23■■□□□ 1.27
CHD8-211ENST00000556833 IDI1Q13907 227 aa23■■□□□ 1.27
CHD8-211ENST00000556833 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
CHD8-211ENST00000556833 MYO5BQ9ULV0 1848 aa23■■□□□ 1.27
CHD8-211ENST00000556833 RBM33Q96EV2 1170 aaKnown RBP22.98■■□□□ 1.27
CHD8-211ENST00000556833 SLC26A8Q96RN1 970 aa22.97■■□□□ 1.27
CHD8-211ENST00000556833 ADGRB3O60242 1522 aa22.97■■□□□ 1.27
CHD8-211ENST00000556833 KDM5AP29375 1690 aaKnown RBP22.97■■□□□ 1.27
CHD8-211ENST00000556833 ADGRL2O95490 1459 aa22.96■■□□□ 1.27
CHD8-211ENST00000556833 BCANQ96GW7 911 aa22.94■■□□□ 1.26
CHD8-211ENST00000556833 GCC2Q8IWJ2 1684 aa22.93■■□□□ 1.26
CHD8-211ENST00000556833 NOS1P29475 1434 aa22.93■■□□□ 1.26
CHD8-211ENST00000556833 ANKRD50Q9ULJ7 1429 aa22.91■■□□□ 1.26
CHD8-211ENST00000556833 TMEM94Q12767 1356 aa22.9■■□□□ 1.26
CHD8-211ENST00000556833 TET3O43151 1660 aa22.9■■□□□ 1.26
CHD8-211ENST00000556833 PROSER2Q86WR7 435 aaPredicted RBP22.87■■□□□ 1.25
CHD8-211ENST00000556833 ROBO1Q9Y6N7 1651 aa22.87■■□□□ 1.25
CHD8-211ENST00000556833 CHGAP10645 457 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms