RNA–Protein interactions for RNA: ENST00000556774.1

RCCD1-207, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-207ENST00000556774 POLR1AO95602 1720 aaPredicted RBP25.35■■□□□ 1.65
RCCD1-207ENST00000556774 KDM5DQ9BY66 1539 aa25.35■■□□□ 1.65
RCCD1-207ENST00000556774 FAM135AQ9P2D6 1515 aa25.32■■□□□ 1.64
RCCD1-207ENST00000556774 KIF3BO15066 747 aa25.3■■□□□ 1.64
RCCD1-207ENST00000556774 PZPP20742 1482 aa25.29■■□□□ 1.64
RCCD1-207ENST00000556774 ARHGEF5Q12774 1597 aa25.29■■□□□ 1.64
RCCD1-207ENST00000556774 NEURL4Q96JN8 1562 aa25.29■■□□□ 1.64
RCCD1-207ENST00000556774 TNRQ92752 1358 aa25.29■■□□□ 1.64
RCCD1-207ENST00000556774 UBAP1LF5GYI3 381 aa25.27■■□□□ 1.64
RCCD1-207ENST00000556774 FBXO31Q5XUX0 539 aaPredicted RBP25.26■■□□□ 1.63
RCCD1-207ENST00000556774 WASHC2CQ9Y4E1 1318 aa25.21■■□□□ 1.63
RCCD1-207ENST00000556774 SOCS7O14512 581 aa25.21■■□□□ 1.63
RCCD1-207ENST00000556774 RNF17Q9BXT8 1623 aaKnown RBP25.21■■□□□ 1.63
RCCD1-207ENST00000556774 RSPH4AQ5TD94 716 aa25.2■■□□□ 1.62
RCCD1-207ENST00000556774 LRRC9Q6ZRR7 1453 aa25.19■■□□□ 1.62
RCCD1-207ENST00000556774 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
RCCD1-207ENST00000556774 ZC3H13Q5T200 1668 aaKnown RBP25.17■■□□□ 1.62
RCCD1-207ENST00000556774 NLRP1Q9C000 1473 aa25.17■■□□□ 1.62
RCCD1-207ENST00000556774 VPS8Q8N3P4 1428 aa25.17■■□□□ 1.62
RCCD1-207ENST00000556774 UGGT1Q9NYU2 1555 aa25.17■■□□□ 1.62
RCCD1-207ENST00000556774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.17■■□□□ 1.62
RCCD1-207ENST00000556774 CPS1P31327 1500 aa25.17■■□□□ 1.62
RCCD1-207ENST00000556774 MIA2Q96PC5 1412 aa25.16■■□□□ 1.62
RCCD1-207ENST00000556774 ABCC3O15438 1527 aa25.15■■□□□ 1.62
RCCD1-207ENST00000556774 EIF2AK4Q9P2K8 1649 aaKnown RBP25.15■■□□□ 1.62
RCCD1-207ENST00000556774 SHANK2Q9UPX8 1470 aa25.15■■□□□ 1.62
RCCD1-207ENST00000556774 TSPY4P0CV99 314 aa25.14■■□□□ 1.62
RCCD1-207ENST00000556774 TSPY10P0CW01 314 aa25.14■■□□□ 1.62
RCCD1-207ENST00000556774 DEPDC5O75140 1603 aa25.14■■□□□ 1.61
RCCD1-207ENST00000556774 VWDEQ8N2E2 1590 aa25.14■■□□□ 1.61
RCCD1-207ENST00000556774 CEP152O94986 1710 aa25.12■■□□□ 1.61
RCCD1-207ENST00000556774 MROH1Q8NDA8 1641 aa25.12■■□□□ 1.61
RCCD1-207ENST00000556774 IQGAP1P46940 1657 aa25.11■■□□□ 1.61
RCCD1-207ENST00000556774 ANKLE2Q86XL3 938 aa25.1■■□□□ 1.61
RCCD1-207ENST00000556774 NPHP4O75161 1426 aaPredicted RBP25.09■■□□□ 1.61
RCCD1-207ENST00000556774 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
RCCD1-207ENST00000556774 MED14O60244 1454 aa25.09■■□□□ 1.61
RCCD1-207ENST00000556774 THEMISQ8N1K5 641 aaPredicted RBP25.08■■□□□ 1.61
RCCD1-207ENST00000556774 CFAP65Q6ZU64 1925 aaKnown RBP25.07■■□□□ 1.6
RCCD1-207ENST00000556774 ERVK-7P63135 1459 aa25.07■■□□□ 1.6
RCCD1-207ENST00000556774 MYOM3Q5VTT5 1437 aa25.06■■□□□ 1.6
RCCD1-207ENST00000556774 PIP4K2BP78356 416 aa25.06■■□□□ 1.6
RCCD1-207ENST00000556774 MAP3K1Q13233 1512 aa25.05■■□□□ 1.6
RCCD1-207ENST00000556774 STRCP1A6NGW2 1772 aa25.05■■□□□ 1.6
RCCD1-207ENST00000556774 KANK4Q5T7N3 995 aaPredicted RBP25.04■■□□□ 1.6
RCCD1-207ENST00000556774 CROCC2H7BZ55 1655 aa25.04■■□□□ 1.6
RCCD1-207ENST00000556774 LOC105371045A0A1W2PR82 267 aa25.03■■□□□ 1.6
RCCD1-207ENST00000556774 HSPA1LP34931 641 aa25.03■■□□□ 1.6
RCCD1-207ENST00000556774 UBR1Q8IWV7 1749 aa25.03■■□□□ 1.6
RCCD1-207ENST00000556774 MED1Q15648 1581 aaPredicted RBP25.02■■□□□ 1.6
RCCD1-207ENST00000556774 DUOX2Q9NRD8 1548 aa25.02■■□□□ 1.6
RCCD1-207ENST00000556774 ALKQ9UM73 1620 aa25.01■■□□□ 1.59
RCCD1-207ENST00000556774 TOM1O60784 492 aa25.01■■□□□ 1.59
RCCD1-207ENST00000556774 SYNMO15061 1565 aa24.98■■□□□ 1.59
RCCD1-207ENST00000556774 PRDM15P57071 1507 aaPredicted RBP24.97■■□□□ 1.59
RCCD1-207ENST00000556774 PTPN23Q9H3S7 1636 aa24.94■■□□□ 1.58
RCCD1-207ENST00000556774 KIF15Q9NS87 1388 aa24.93■■□□□ 1.58
RCCD1-207ENST00000556774 LRRC7Q96NW7 1537 aa24.93■■□□□ 1.58
RCCD1-207ENST00000556774 SCAF11Q99590 1463 aaKnown RBP24.92■■□□□ 1.58
RCCD1-207ENST00000556774 ABCC5O15440 1437 aa24.91■■□□□ 1.58
RCCD1-207ENST00000556774 ERBINQ96RT1 1412 aa24.91■■□□□ 1.58
RCCD1-207ENST00000556774 SLIT1O75093 1534 aa24.88■■□□□ 1.57
RCCD1-207ENST00000556774 PIK3C2BO00750 1634 aa24.88■■□□□ 1.57
RCCD1-207ENST00000556774 ARHGAP23Q9P227 1491 aa24.88■■□□□ 1.57
RCCD1-207ENST00000556774 ARHGAP31Q2M1Z3 1444 aa24.87■■□□□ 1.57
RCCD1-207ENST00000556774 RRP7BPQ9NSQ0 103 aa24.86■■□□□ 1.57
RCCD1-207ENST00000556774 DAPK1P53355 1430 aa24.86■■□□□ 1.57
RCCD1-207ENST00000556774 XIRP1Q702N8 1843 aaKnown RBP24.85■■□□□ 1.57
RCCD1-207ENST00000556774 SENP3Q9H4L4 574 aaPredicted RBP24.84■■□□□ 1.57
RCCD1-207ENST00000556774 LTKP29376 864 aa24.82■■□□□ 1.56
RCCD1-207ENST00000556774 FGD6Q6ZV73 1430 aa24.82■■□□□ 1.56
RCCD1-207ENST00000556774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.82■■□□□ 1.561e-6■■■□□ 14.9
RCCD1-207ENST00000556774 TXNDC2Q86VQ3 553 aa24.8■■□□□ 1.56
RCCD1-207ENST00000556774 KDM5AP29375 1690 aaKnown RBP24.78■■□□□ 1.56
RCCD1-207ENST00000556774 KANK1Q14678 1352 aa24.78■■□□□ 1.56
RCCD1-207ENST00000556774 LMTK2Q8IWU2 1503 aa24.76■■□□□ 1.55
RCCD1-207ENST00000556774 APLP2Q06481 763 aa24.76■■□□□ 1.55
RCCD1-207ENST00000556774 PHF23Q9BUL5 403 aaPredicted RBP24.76■■□□□ 1.55
RCCD1-207ENST00000556774 EFCAB6Q5THR3 1501 aa24.76■■□□□ 1.55
RCCD1-207ENST00000556774 TMEM2Q9UHN6 1383 aa24.75■■□□□ 1.55
RCCD1-207ENST00000556774 CHIC2Q9UKJ5 165 aa24.74■■□□□ 1.55
RCCD1-207ENST00000556774 EID1Q9Y6B2 187 aa24.74■■□□□ 1.55
RCCD1-207ENST00000556774 ANKRD30AQ9BXX3 1397 aa24.74■■□□□ 1.55
RCCD1-207ENST00000556774 STAG3Q9UJ98 1225 aa24.71■■□□□ 1.55
RCCD1-207ENST00000556774 ADGRB3O60242 1522 aa24.71■■□□□ 1.55
RCCD1-207ENST00000556774 IDI1Q13907 227 aa24.67■■□□□ 1.54
RCCD1-207ENST00000556774 NOS1P29475 1434 aa24.67■■□□□ 1.54
RCCD1-207ENST00000556774 ADGRL2O95490 1459 aa24.66■■□□□ 1.54
RCCD1-207ENST00000556774 TET3O43151 1660 aa24.66■■□□□ 1.54
RCCD1-207ENST00000556774 MYO5BQ9ULV0 1848 aa24.65■■□□□ 1.54
RCCD1-207ENST00000556774 TMEM94Q12767 1356 aa24.64■■□□□ 1.53
RCCD1-207ENST00000556774 NWD1Q149M9 1564 aa24.62■■□□□ 1.53
RCCD1-207ENST00000556774 ROBO1Q9Y6N7 1651 aa24.61■■□□□ 1.53
RCCD1-207ENST00000556774 GCC2Q8IWJ2 1684 aa24.6■■□□□ 1.53
RCCD1-207ENST00000556774 SLC26A8Q96RN1 970 aa24.6■■□□□ 1.53
RCCD1-207ENST00000556774 NKTRP30414 1462 aaKnown RBP24.58■■□□□ 1.53
RCCD1-207ENST00000556774 KCNA6P17658 529 aa24.58■■□□□ 1.53
RCCD1-207ENST00000556774 FAM135BQ49AJ0 1406 aa24.58■■□□□ 1.53
RCCD1-207ENST00000556774 RPRD2Q5VT52 1461 aaKnown RBP24.58■■□□□ 1.52
RCCD1-207ENST00000556774 FAM50AQ14320 339 aaKnown RBP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms