RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 TNRQ92752 1358 aa22.14■■□□□ 1.14
TRAPPC6B-206ENST00000556765 RNF17Q9BXT8 1623 aaKnown RBP22.14■■□□□ 1.14
TRAPPC6B-206ENST00000556765 NPHP4O75161 1426 aaPredicted RBP22.14■■□□□ 1.13
TRAPPC6B-206ENST00000556765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.13■■□□□ 1.13
TRAPPC6B-206ENST00000556765 LRRC7Q96NW7 1537 aa22.12■■□□□ 1.13
TRAPPC6B-206ENST00000556765 MED14O60244 1454 aa22.12■■□□□ 1.13
TRAPPC6B-206ENST00000556765 POTEAQ6S8J7 498 aa22.12■■□□□ 1.13
TRAPPC6B-206ENST00000556765 FBXO31Q5XUX0 539 aaPredicted RBP22.1■■□□□ 1.13
TRAPPC6B-206ENST00000556765 DEPDC5O75140 1603 aa22.09■■□□□ 1.13
TRAPPC6B-206ENST00000556765 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
TRAPPC6B-206ENST00000556765 THEMISQ8N1K5 641 aaPredicted RBP22.09■■□□□ 1.13
TRAPPC6B-206ENST00000556765 SYNMO15061 1565 aa22.08■■□□□ 1.12
TRAPPC6B-206ENST00000556765 STRCP1A6NGW2 1772 aa22.07■■□□□ 1.12
TRAPPC6B-206ENST00000556765 KIAA1107Q9UPP5 1409 aa22.07■■□□□ 1.12
TRAPPC6B-206ENST00000556765 IQGAP1P46940 1657 aa22.06■■□□□ 1.12
TRAPPC6B-206ENST00000556765 ADGBQ8N7X0 1667 aa22.06■■□□□ 1.12
TRAPPC6B-206ENST00000556765 GPATCH8Q9UKJ3 1502 aaKnown RBP22.06■■□□□ 1.12
TRAPPC6B-206ENST00000556765 PZPP20742 1482 aa22.05■■□□□ 1.12
TRAPPC6B-206ENST00000556765 PLEKHH2Q8IVE3 1493 aa22.05■■□□□ 1.12
TRAPPC6B-206ENST00000556765 FAM135AQ9P2D6 1515 aa22.04■■□□□ 1.12
TRAPPC6B-206ENST00000556765 UGGT1Q9NYU2 1555 aa22.04■■□□□ 1.12
TRAPPC6B-206ENST00000556765 NLRP1Q9C000 1473 aa22.03■■□□□ 1.12
TRAPPC6B-206ENST00000556765 CASKIN1Q8WXD9 1431 aa22.02■■□□□ 1.12
TRAPPC6B-206ENST00000556765 SETD1AO15047 1707 aaKnown RBP22.01■■□□□ 1.11
TRAPPC6B-206ENST00000556765 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
TRAPPC6B-206ENST00000556765 MIA2Q96PC5 1412 aa22■■□□□ 1.11
TRAPPC6B-206ENST00000556765 CFDP1Q9UEE9 299 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC6B-206ENST00000556765 KDM5DQ9BY66 1539 aa21.99■■□□□ 1.11
TRAPPC6B-206ENST00000556765 SRCAPQ6ZRS2 3230 aa21.96■■□□□ 1.11
TRAPPC6B-206ENST00000556765 DHX29Q7Z478 1369 aaKnown RBP21.96■■□□□ 1.11
TRAPPC6B-206ENST00000556765 KIF3BO15066 747 aa21.93■■□□□ 1.1
TRAPPC6B-206ENST00000556765 FAM135BQ49AJ0 1406 aa21.93■■□□□ 1.1
TRAPPC6B-206ENST00000556765 WASHC2CQ9Y4E1 1318 aa21.93■■□□□ 1.1
TRAPPC6B-206ENST00000556765 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
TRAPPC6B-206ENST00000556765 APLP2Q06481 763 aa21.91■■□□□ 1.1
TRAPPC6B-206ENST00000556765 RTEL1-TNFRSF6BF6WH68 1400 aa21.9■■□□□ 1.1
TRAPPC6B-206ENST00000556765 ZC3H13Q5T200 1668 aaKnown RBP21.9■■□□□ 1.1
TRAPPC6B-206ENST00000556765 MAP3K1Q13233 1512 aa21.89■■□□□ 1.09
TRAPPC6B-206ENST00000556765 FYCO1Q9BQS8 1478 aa21.88■■□□□ 1.09
TRAPPC6B-206ENST00000556765 XIRP1Q702N8 1843 aaKnown RBP21.87■■□□□ 1.09
TRAPPC6B-206ENST00000556765 ZNF644Q9H582 1327 aaPredicted RBP21.86■■□□□ 1.09
TRAPPC6B-206ENST00000556765 MBD5Q9P267 1494 aa21.86■■□□□ 1.09
TRAPPC6B-206ENST00000556765 UPF1Q92900 1129 aaKnown RBP eCLIP21.86■■□□□ 1.09
TRAPPC6B-206ENST00000556765 SCAF11Q99590 1463 aaKnown RBP21.83■■□□□ 1.08
TRAPPC6B-206ENST00000556765 PCGF6Q9BYE7 350 aa21.81■■□□□ 1.08
TRAPPC6B-206ENST00000556765 ROBO1Q9Y6N7 1651 aa21.81■■□□□ 1.08
TRAPPC6B-206ENST00000556765 LTKP29376 864 aa21.76■■□□□ 1.07
TRAPPC6B-206ENST00000556765 UBR1Q8IWV7 1749 aa21.76■■□□□ 1.07
TRAPPC6B-206ENST00000556765 ERVK-7P63135 1459 aa21.76■■□□□ 1.07
TRAPPC6B-206ENST00000556765 TMEM94Q12767 1356 aa21.75■■□□□ 1.07
TRAPPC6B-206ENST00000556765 TIAM1Q13009 1591 aa21.75■■□□□ 1.07
TRAPPC6B-206ENST00000556765 TXNDC2Q86VQ3 553 aa21.74■■□□□ 1.07
TRAPPC6B-206ENST00000556765 MTUS2Q5JR59 1369 aa21.74■■□□□ 1.07
TRAPPC6B-206ENST00000556765 JCADQ9P266 1359 aa21.74■■□□□ 1.07
TRAPPC6B-206ENST00000556765 CCDC141Q6ZP82 1450 aa21.73■■□□□ 1.07
TRAPPC6B-206ENST00000556765 LRRC9Q6ZRR7 1453 aa21.73■■□□□ 1.07
TRAPPC6B-206ENST00000556765 ARHGAP23Q9P227 1491 aa21.73■■□□□ 1.07
TRAPPC6B-206ENST00000556765 TRIM52Q96A61 297 aa21.73■■□□□ 1.07
TRAPPC6B-206ENST00000556765 NCOA2Q15596 1464 aa21.72■■□□□ 1.07
TRAPPC6B-206ENST00000556765 ABCC3O15438 1527 aa21.72■■□□□ 1.07
TRAPPC6B-206ENST00000556765 SLIT1O75093 1534 aa21.72■■□□□ 1.07
TRAPPC6B-206ENST00000556765 PHLPP1O60346 1717 aa21.69■■□□□ 1.06
TRAPPC6B-206ENST00000556765 EID1Q9Y6B2 187 aa21.68■■□□□ 1.06
TRAPPC6B-206ENST00000556765 ZNF772Q68DY9 489 aaPredicted RBP21.67■■□□□ 1.06
TRAPPC6B-206ENST00000556765 PROSER2Q86WR7 435 aaPredicted RBP21.65■■□□□ 1.06
TRAPPC6B-206ENST00000556765 RBM33Q96EV2 1170 aaKnown RBP21.65■■□□□ 1.06
TRAPPC6B-206ENST00000556765 LRP6O75581 1613 aa21.65■■□□□ 1.06
TRAPPC6B-206ENST00000556765 KCNA6P17658 529 aa21.64■■□□□ 1.05
TRAPPC6B-206ENST00000556765 MEX3CQ5U5Q3 659 aaKnown RBP21.64■■□□□ 1.05
TRAPPC6B-206ENST00000556765 RSPH4AQ5TD94 716 aa21.63■■□□□ 1.05
TRAPPC6B-206ENST00000556765 CAMSAP2Q08AD1 1489 aa21.62■■□□□ 1.05
TRAPPC6B-206ENST00000556765 SLAIN2Q9P270 581 aa21.61■■□□□ 1.05
TRAPPC6B-206ENST00000556765 CFAP65Q6ZU64 1925 aaKnown RBP21.61■■□□□ 1.05
TRAPPC6B-206ENST00000556765 PRDM15P57071 1507 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC6B-206ENST00000556765 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
TRAPPC6B-206ENST00000556765 SPATA31A6Q5VVP1 1343 aa21.6■■□□□ 1.05
TRAPPC6B-206ENST00000556765 COL16A1Q07092 1604 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC6B-206ENST00000556765 MSH6P52701 1360 aa21.6■■□□□ 1.05
TRAPPC6B-206ENST00000556765 RXRBP28702 533 aa21.59■■□□□ 1.05
TRAPPC6B-206ENST00000556765 TMEM2Q9UHN6 1383 aa21.59■■□□□ 1.05
TRAPPC6B-206ENST00000556765 PPARGC1BQ86YN6 1023 aaKnown RBP21.58■■□□□ 1.05
TRAPPC6B-206ENST00000556765 NKTRP30414 1462 aaKnown RBP21.58■■□□□ 1.04
TRAPPC6B-206ENST00000556765 CDK12Q9NYV4 1490 aaPredicted RBP21.58■■□□□ 1.04
TRAPPC6B-206ENST00000556765 TSPY4P0CV99 314 aa21.57■■□□□ 1.04
TRAPPC6B-206ENST00000556765 TSPY10P0CW01 314 aa21.57■■□□□ 1.04
TRAPPC6B-206ENST00000556765 MROH1Q8NDA8 1641 aa21.57■■□□□ 1.04
TRAPPC6B-206ENST00000556765 CEP152O94986 1710 aa21.57■■□□□ 1.04
TRAPPC6B-206ENST00000556765 FGD6Q6ZV73 1430 aa21.56■■□□□ 1.04
TRAPPC6B-206ENST00000556765 EIF2AK4Q9P2K8 1649 aaKnown RBP21.55■■□□□ 1.04
TRAPPC6B-206ENST00000556765 SLC26A8Q96RN1 970 aa21.55■■□□□ 1.04
TRAPPC6B-206ENST00000556765 ARHGEF5Q12774 1597 aa21.55■■□□□ 1.04
TRAPPC6B-206ENST00000556765 NWD1Q149M9 1564 aa21.54■■□□□ 1.04
TRAPPC6B-206ENST00000556765 PIK3C2BO00750 1634 aa21.54■■□□□ 1.04
TRAPPC6B-206ENST00000556765 TET3O43151 1660 aa21.53■■□□□ 1.04
TRAPPC6B-206ENST00000556765 STAG3Q9UJ98 1225 aa21.51■■□□□ 1.03
TRAPPC6B-206ENST00000556765 ARHGAP31Q2M1Z3 1444 aa21.5■■□□□ 1.03
TRAPPC6B-206ENST00000556765 RRBP1Q9P2E9 1410 aaKnown RBP21.49■■□□□ 1.03
TRAPPC6B-206ENST00000556765 SHPRHQ149N8 1683 aa21.49■■□□□ 1.03
TRAPPC6B-206ENST00000556765 EFCAB6Q5THR3 1501 aa21.49■■□□□ 1.03
TRAPPC6B-206ENST00000556765 KANK4Q5T7N3 995 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms