RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 INO80Q9ULG1 1556 aaPredicted RBP25.79■■□□□ 1.72
SDR39U1-220ENST00000556548 MAGI2Q86UL8 1455 aa25.78■■□□□ 1.72
SDR39U1-220ENST00000556548 KIF3BO15066 747 aa25.78■■□□□ 1.72
SDR39U1-220ENST00000556548 DCAF11Q8TEB1 546 aa25.78■■□□□ 1.72
SDR39U1-220ENST00000556548 CCDC144AA2RUR9 1427 aa25.78■■□□□ 1.72
SDR39U1-220ENST00000556548 PLA2R1Q13018 1463 aa25.78■■□□□ 1.72
SDR39U1-220ENST00000556548 RGL3Q3MIN7 710 aa25.77■■□□□ 1.72
SDR39U1-220ENST00000556548 CENPBP07199 599 aaPredicted RBP25.77■■□□□ 1.72
SDR39U1-220ENST00000556548 ZNF518AQ6AHZ1 1483 aa25.74■■□□□ 1.71
SDR39U1-220ENST00000556548 WASHC2AQ641Q2 1341 aa25.73■■□□□ 1.71
SDR39U1-220ENST00000556548 DHX29Q7Z478 1369 aaKnown RBP25.72■■□□□ 1.71
SDR39U1-220ENST00000556548 RAPGEF3O95398 923 aa25.71■■□□□ 1.71
SDR39U1-220ENST00000556548 C11orf95C9JLR9 678 aaPredicted RBP25.71■■□□□ 1.71
SDR39U1-220ENST00000556548 POGZQ7Z3K3 1410 aa25.7■■□□□ 1.7
SDR39U1-220ENST00000556548 KIDINS220Q9ULH0 1771 aa25.69■■□□□ 1.7
SDR39U1-220ENST00000556548 CFAP74Q9C0B2 1584 aa25.69■■□□□ 1.7
SDR39U1-220ENST00000556548 UHRF1BP1Q6BDS2 1440 aa25.65■■□□□ 1.7
SDR39U1-220ENST00000556548 SPATA31E1Q6ZUB1 1445 aa25.65■■□□□ 1.7
SDR39U1-220ENST00000556548 KANK1Q14678 1352 aa25.65■■□□□ 1.7
SDR39U1-220ENST00000556548 FAM69CQ0P6D2 419 aa25.65■■□□□ 1.7
SDR39U1-220ENST00000556548 ANP32CO43423 234 aa25.63■■□□□ 1.69
SDR39U1-220ENST00000556548 DEPDC5O75140 1603 aa25.63■■□□□ 1.69
SDR39U1-220ENST00000556548 USP47Q96K76 1375 aa25.62■■□□□ 1.69
SDR39U1-220ENST00000556548 CARD11Q9BXL7 1154 aa25.62■■□□□ 1.69
SDR39U1-220ENST00000556548 E9PCH4 1651 aa25.62■■□□□ 1.69
SDR39U1-220ENST00000556548 A2MP01023 1474 aa25.61■■□□□ 1.69
SDR39U1-220ENST00000556548 NEO1Q92859 1461 aa25.61■■□□□ 1.69
SDR39U1-220ENST00000556548 KDM5CP41229 1560 aa25.61■■□□□ 1.69
SDR39U1-220ENST00000556548 ATP10AO60312 1499 aa25.6■■□□□ 1.69
SDR39U1-220ENST00000556548 CCDC7Q96M83 1385 aa25.59■■□□□ 1.69
SDR39U1-220ENST00000556548 RALGAPBQ86X10 1494 aa25.58■■□□□ 1.69
SDR39U1-220ENST00000556548 MLH3Q9UHC1 1453 aa25.58■■□□□ 1.69
SDR39U1-220ENST00000556548 MAP3K4Q9Y6R4 1608 aa25.58■■□□□ 1.68
SDR39U1-220ENST00000556548 GGT6Q6P531 493 aa25.57■■□□□ 1.68
SDR39U1-220ENST00000556548 HECW2Q9P2P5 1572 aa25.57■■□□□ 1.68
SDR39U1-220ENST00000556548 MROH1Q8NDA8 1641 aa25.56■■□□□ 1.68
SDR39U1-220ENST00000556548 EIF2AK4Q9P2K8 1649 aaKnown RBP25.56■■□□□ 1.68
SDR39U1-220ENST00000556548 KIF7Q2M1P5 1343 aa25.55■■□□□ 1.68
SDR39U1-220ENST00000556548 POLR3GLQ9BT43 218 aa25.55■■□□□ 1.68
SDR39U1-220ENST00000556548 VWDEQ8N2E2 1590 aa25.54■■□□□ 1.68
SDR39U1-220ENST00000556548 ROCK2O75116 1388 aaKnown RBP25.54■■□□□ 1.68
SDR39U1-220ENST00000556548 PRDM15P57071 1507 aaPredicted RBP25.54■■□□□ 1.68
SDR39U1-220ENST00000556548 PRAG1Q86YV5 1406 aa25.53■■□□□ 1.68
SDR39U1-220ENST00000556548 TET3O43151 1660 aa25.53■■□□□ 1.68
SDR39U1-220ENST00000556548 NBPF1Q3BBV0 1214 aa25.52■■□□□ 1.68
SDR39U1-220ENST00000556548 FRMPD1Q5SYB0 1578 aa25.52■■□□□ 1.68
SDR39U1-220ENST00000556548 GLI2P10070 1586 aa25.51■■□□□ 1.67
SDR39U1-220ENST00000556548 ABCA6Q8N139 1617 aa25.51■■□□□ 1.67
SDR39U1-220ENST00000556548 PTPRTO14522 1441 aa25.5■■□□□ 1.67
SDR39U1-220ENST00000556548 TRPM2O94759 1503 aa25.5■■□□□ 1.67
SDR39U1-220ENST00000556548 DIP2BQ9P265 1576 aa25.49■■□□□ 1.67
SDR39U1-220ENST00000556548 ST20-MTHFSA0A0A6YYL1 179 aa25.49■■□□□ 1.67
SDR39U1-220ENST00000556548 SPHKAPQ2M3C7 1700 aa25.48■■□□□ 1.67
SDR39U1-220ENST00000556548 CNTLNQ9NXG0 1405 aa25.47■■□□□ 1.67
SDR39U1-220ENST00000556548 BCORL1Q5H9F3 1711 aa25.46■■□□□ 1.67
SDR39U1-220ENST00000556548 CLTCL1P53675 1640 aa25.46■■□□□ 1.67
SDR39U1-220ENST00000556548 TSPOAP1O95153 1857 aa25.46■■□□□ 1.67
SDR39U1-220ENST00000556548 YEATS2Q9ULM3 1422 aa25.45■■□□□ 1.66
SDR39U1-220ENST00000556548 RICTORQ6R327 1708 aa25.44■■□□□ 1.66
SDR39U1-220ENST00000556548 TRPM1Q7Z4N2 1603 aa25.43■■□□□ 1.66
SDR39U1-220ENST00000556548 UGGT1Q9NYU2 1555 aa25.43■■□□□ 1.66
SDR39U1-220ENST00000556548 CEP152O94986 1710 aa25.43■■□□□ 1.66
SDR39U1-220ENST00000556548 WASHC2CQ9Y4E1 1318 aa25.43■■□□□ 1.66
SDR39U1-220ENST00000556548 CCER2I3L3R5 266 aa25.42■■□□□ 1.66
SDR39U1-220ENST00000556548 EFCAB6Q5THR3 1501 aa25.42■■□□□ 1.66
SDR39U1-220ENST00000556548 PPRC1Q5VV67 1664 aaKnown RBP25.42■■□□□ 1.66
SDR39U1-220ENST00000556548 RNF17Q9BXT8 1623 aaKnown RBP25.42■■□□□ 1.66
SDR39U1-220ENST00000556548 DIP2CQ9Y2E4 1556 aa25.42■■□□□ 1.66
SDR39U1-220ENST00000556548 GTF3C3Q9Y5Q9 886 aa25.41■■□□□ 1.66
SDR39U1-220ENST00000556548 CNGB1Q14028 1251 aaPredicted RBP25.37■■□□□ 1.65
SDR39U1-220ENST00000556548 LMTK2Q8IWU2 1503 aa25.37■■□□□ 1.65
SDR39U1-220ENST00000556548 POLR1AO95602 1720 aaPredicted RBP25.36■■□□□ 1.65
SDR39U1-220ENST00000556548 CHGAP10645 457 aaKnown RBP25.35■■□□□ 1.65
SDR39U1-220ENST00000556548 NPATQ14207 1427 aa25.35■■□□□ 1.65
SDR39U1-220ENST00000556548 CFAP65Q6ZU64 1925 aaKnown RBP25.33■■□□□ 1.65
SDR39U1-220ENST00000556548 GPRASP1Q5JY77 1395 aa25.33■■□□□ 1.65
SDR39U1-220ENST00000556548 ABCC3O15438 1527 aa25.32■■□□□ 1.64
SDR39U1-220ENST00000556548 PRKRIP1Q9H875 184 aaPredicted RBP25.3■■□□□ 1.64
SDR39U1-220ENST00000556548 ARID4BQ4LE39 1312 aaPredicted RBP25.29■■□□□ 1.64
SDR39U1-220ENST00000556548 MADDQ8WXG6 1647 aa25.28■■□□□ 1.64
SDR39U1-220ENST00000556548 CCDC184Q52MB2 194 aa25.26■■□□□ 1.63
SDR39U1-220ENST00000556548 ADGRF5Q8IZF2 1346 aa25.25■■□□□ 1.63
SDR39U1-220ENST00000556548 ZMYM4Q5VZL5 1548 aa25.23■■□□□ 1.63
SDR39U1-220ENST00000556548 KIF1BO60333 1816 aa25.23■■□□□ 1.63
SDR39U1-220ENST00000556548 CAMSAP1Q5T5Y3 1602 aa25.23■■□□□ 1.63
SDR39U1-220ENST00000556548 STAC3Q96MF2 364 aa25.23■■□□□ 1.63
SDR39U1-220ENST00000556548 TESK2Q96S53 571 aa25.23■■□□□ 1.63
SDR39U1-220ENST00000556548 KIF13AQ9H1H9 1805 aa25.22■■□□□ 1.63
SDR39U1-220ENST00000556548 MROH2AA6NES4 1674 aa25.22■■□□□ 1.63
SDR39U1-220ENST00000556548 CFAP70Q5T0N1 1121 aa25.21■■□□□ 1.63
SDR39U1-220ENST00000556548 LAMC1P11047 1609 aa25.21■■□□□ 1.63
SDR39U1-220ENST00000556548 COL17A1Q9UMD9 1497 aaPredicted RBP25.2■■□□□ 1.62
SDR39U1-220ENST00000556548 DISP3Q9P2K9 1392 aa25.19■■□□□ 1.62
SDR39U1-220ENST00000556548 SIGLEC1Q9BZZ2 1709 aa25.18■■□□□ 1.62
SDR39U1-220ENST00000556548 MLECQ14165 292 aa25.17■■□□□ 1.62
SDR39U1-220ENST00000556548 NEURL4Q96JN8 1562 aa25.17■■□□□ 1.62
SDR39U1-220ENST00000556548 NOS1P29475 1434 aa25.17■■□□□ 1.62
SDR39U1-220ENST00000556548 NUTM2DQ5VT03 806 aaPredicted RBP25.15■■□□□ 1.62
SDR39U1-220ENST00000556548 ADGRB3O60242 1522 aa25.15■■□□□ 1.62
SDR39U1-220ENST00000556548 MRS2Q9HD23 443 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms