RNA–Protein interactions for RNA: ENST00000556454.1

CLMN-207, Transcript of calmin, humanhuman

TSL 2

Gene CLMN, Length 3,023 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-207ENST00000556454 MAGI3Q5TCQ9 1506 aa13.35□□□□□ -0.27
CLMN-207ENST00000556454 CHIC2Q9UKJ5 165 aa13.34□□□□□ -0.27
CLMN-207ENST00000556454 PARD3Q8TEW0 1356 aa13.34□□□□□ -0.27
CLMN-207ENST00000556454 BECN1Q14457 450 aa13.34□□□□□ -0.27
CLMN-207ENST00000556454 NLRP13Q86W25 1043 aa13.34□□□□□ -0.27
CLMN-207ENST00000556454 POLR3GLQ9BT43 218 aa13.34□□□□□ -0.27
CLMN-207ENST00000556454 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
CLMN-207ENST00000556454 KIF21AQ7Z4S6 1674 aa13.32□□□□□ -0.28
CLMN-207ENST00000556454 ESPNB1AK53 854 aa13.32□□□□□ -0.28
CLMN-207ENST00000556454 CUL7Q14999 1698 aa13.32□□□□□ -0.28
CLMN-207ENST00000556454 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
CLMN-207ENST00000556454 UHRF1BP1Q6BDS2 1440 aa13.31□□□□□ -0.28
CLMN-207ENST00000556454 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
CLMN-207ENST00000556454 MRE11P49959 708 aa13.31□□□□□ -0.28
CLMN-207ENST00000556454 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
CLMN-207ENST00000556454 RBM10P98175 930 aaKnown RBP13.31□□□□□ -0.28
CLMN-207ENST00000556454 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
CLMN-207ENST00000556454 SLKQ9H2G2 1235 aaPredicted RBP13.29□□□□□ -0.28
CLMN-207ENST00000556454 AAMPQ13685 434 aa13.29□□□□□ -0.28
CLMN-207ENST00000556454 RGS3P49796 1198 aa13.29□□□□□ -0.28
CLMN-207ENST00000556454 GAPVD1Q14C86 1478 aa13.28□□□□□ -0.28
CLMN-207ENST00000556454 ZNF608Q9ULD9 1512 aaPredicted RBP13.28□□□□□ -0.28
CLMN-207ENST00000556454 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
CLMN-207ENST00000556454 PZPP20742 1482 aa13.28□□□□□ -0.28
CLMN-207ENST00000556454 MCM4P33991 863 aa13.27□□□□□ -0.28
CLMN-207ENST00000556454 EIF3AQ14152 1382 aaKnown RBP13.26□□□□□ -0.29
CLMN-207ENST00000556454 DNMT1P26358 1616 aaKnown RBP13.26□□□□□ -0.29
CLMN-207ENST00000556454 ARXQ96QS3 562 aa13.26□□□□□ -0.29
CLMN-207ENST00000556454 MYH16Q9H6N6 1097 aa13.26□□□□□ -0.29
CLMN-207ENST00000556454 GRPEL1Q9HAV7 217 aa13.25□□□□□ -0.29
CLMN-207ENST00000556454 LAMC3Q9Y6N6 1575 aa13.25□□□□□ -0.29
CLMN-207ENST00000556454 SEC24BO95487 1268 aa13.24□□□□□ -0.29
CLMN-207ENST00000556454 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
CLMN-207ENST00000556454 DAPK1P53355 1430 aa13.24□□□□□ -0.29
CLMN-207ENST00000556454 ARHGEF12Q9NZN5 1544 aa13.23□□□□□ -0.29
CLMN-207ENST00000556454 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
CLMN-207ENST00000556454 TRAK2O60296 914 aa13.22□□□□□ -0.29
CLMN-207ENST00000556454 FGD1P98174 961 aa13.22□□□□□ -0.29
CLMN-207ENST00000556454 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
CLMN-207ENST00000556454 TBC1D2Q9BYX2 928 aa13.22□□□□□ -0.29
CLMN-207ENST00000556454 KIAA1107Q9UPP5 1409 aa13.21□□□□□ -0.29
CLMN-207ENST00000556454 MAPK8IP3Q9UPT6 1336 aa13.21□□□□□ -0.29
CLMN-207ENST00000556454 TERF1P54274 439 aa13.21□□□□□ -0.29
CLMN-207ENST00000556454 GZF1Q9H116 711 aaPredicted RBP13.21□□□□□ -0.29
CLMN-207ENST00000556454 CLASP1Q7Z460 1538 aa13.21□□□□□ -0.29
CLMN-207ENST00000556454 CCDC144AA2RUR9 1427 aa13.21□□□□□ -0.29
CLMN-207ENST00000556454 ZMYM3Q14202 1370 aa13.21□□□□□ -0.3
CLMN-207ENST00000556454 KIAA1211Q6ZU35 1233 aa13.21□□□□□ -0.3
CLMN-207ENST00000556454 ABCA10Q8WWZ4 1543 aa13.2□□□□□ -0.3
CLMN-207ENST00000556454 A0A0U1RQG5 324 aaPredicted RBP13.2□□□□□ -0.3
CLMN-207ENST00000556454 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
CLMN-207ENST00000556454 MAP7D2Q96T17 732 aa13.2□□□□□ -0.3
CLMN-207ENST00000556454 ABCC5O15440 1437 aa13.19□□□□□ -0.3
CLMN-207ENST00000556454 ZNF521Q96K83 1311 aa13.19□□□□□ -0.3
CLMN-207ENST00000556454 PER1O15534 1290 aaPredicted RBP13.19□□□□□ -0.3
CLMN-207ENST00000556454 NESP48681 1621 aa13.19□□□□□ -0.3
CLMN-207ENST00000556454 TRIM44Q96DX7 344 aaPredicted RBP13.18□□□□□ -0.3
CLMN-207ENST00000556454 CARD11Q9BXL7 1154 aa13.18□□□□□ -0.3
CLMN-207ENST00000556454 CADPSQ9ULU8 1353 aa13.18□□□□□ -0.3
CLMN-207ENST00000556454 RIPK4P57078 832 aa13.18□□□□□ -0.3
CLMN-207ENST00000556454 ST20-MTHFSA0A0A6YYL1 179 aa13.18□□□□□ -0.3
CLMN-207ENST00000556454 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
CLMN-207ENST00000556454 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
CLMN-207ENST00000556454 OFD1O75665 1012 aa13.17□□□□□ -0.3
CLMN-207ENST00000556454 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
CLMN-207ENST00000556454 CHMP5Q9NZZ3 219 aa13.17□□□□□ -0.3
CLMN-207ENST00000556454 IGHDP01880 384 aa13.16□□□□□ -0.3
CLMN-207ENST00000556454 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
CLMN-207ENST00000556454 ADGBQ8N7X0 1667 aa13.16□□□□□ -0.3
CLMN-207ENST00000556454 EPRSP07814 1512 aaKnown RBP13.15□□□□□ -0.3
CLMN-207ENST00000556454 CEP170Q5SW79 1584 aa13.14□□□□□ -0.31
CLMN-207ENST00000556454 UPF2Q9HAU5 1272 aaKnown RBP13.14□□□□□ -0.31
CLMN-207ENST00000556454 RTEL1-TNFRSF6BF6WH68 1400 aa13.14□□□□□ -0.31
CLMN-207ENST00000556454 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
CLMN-207ENST00000556454 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.13□□□□□ -0.31
CLMN-207ENST00000556454 PPP1R9BQ96SB3 815 aa13.13□□□□□ -0.31
CLMN-207ENST00000556454 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
CLMN-207ENST00000556454 TRMT2AQ8IZ69 625 aaKnown RBP13.13□□□□□ -0.31
CLMN-207ENST00000556454 ZSCAN30Q86W11 494 aa13.12□□□□□ -0.31
CLMN-207ENST00000556454 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
CLMN-207ENST00000556454 GAS2L3Q86XJ1 694 aa13.12□□□□□ -0.31
CLMN-207ENST00000556454 ZNF692Q9BU19 519 aaPredicted RBP13.12□□□□□ -0.31
CLMN-207ENST00000556454 NCOA3Q9Y6Q9 1424 aa13.12□□□□□ -0.31
CLMN-207ENST00000556454 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
CLMN-207ENST00000556454 CCDC173Q0VFZ6 552 aa13.11□□□□□ -0.31
CLMN-207ENST00000556454 TRPM1Q7Z4N2 1603 aa13.11□□□□□ -0.31
CLMN-207ENST00000556454 SLFN5Q08AF3 891 aa13.11□□□□□ -0.31
CLMN-207ENST00000556454 NKTRP30414 1462 aaKnown RBP13.11□□□□□ -0.31
CLMN-207ENST00000556454 CGNL1Q0VF96 1302 aa13.1□□□□□ -0.31
CLMN-207ENST00000556454 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
CLMN-207ENST00000556454 NINLQ9Y2I6 1382 aa13.1□□□□□ -0.31
CLMN-207ENST00000556454 MTERF4Q7Z6M4 381 aaKnown RBP13.1□□□□□ -0.31
CLMN-207ENST00000556454 RAD54L2Q9Y4B4 1467 aa13.09□□□□□ -0.31
CLMN-207ENST00000556454 PLXNC1O60486 1568 aa13.09□□□□□ -0.31
CLMN-207ENST00000556454 DNMBPQ6XZF7 1577 aa13.09□□□□□ -0.31
CLMN-207ENST00000556454 DDIT3P35638 169 aa13.09□□□□□ -0.31
CLMN-207ENST00000556454 LAMC1P11047 1609 aa13.09□□□□□ -0.31
CLMN-207ENST00000556454 CDK13Q14004 1512 aaKnown RBP13.08□□□□□ -0.31
CLMN-207ENST00000556454 UTP14CQ5TAP6 766 aaKnown RBP13.08□□□□□ -0.32
CLMN-207ENST00000556454 CROCC2H7BZ55 1655 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms