RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 TSR1Q2NL82 804 aaKnown RBP13.76□□□□□ -0.21
LINC00871-202ENST00000556071 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
LINC00871-202ENST00000556071 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
LINC00871-202ENST00000556071 BCL2L12Q9HB09 334 aa13.74□□□□□ -0.21
LINC00871-202ENST00000556071 CDHR5Q9HBB8 845 aa13.74□□□□□ -0.21
LINC00871-202ENST00000556071 MMRN1Q13201 1228 aa13.73□□□□□ -0.21
LINC00871-202ENST00000556071 C6orf132Q5T0Z8 1188 aa13.73□□□□□ -0.21
LINC00871-202ENST00000556071 GPR37O15354 613 aa13.7□□□□□ -0.22
LINC00871-202ENST00000556071 SPNS2Q8IVW8 549 aa13.7□□□□□ -0.22
LINC00871-202ENST00000556071 POTEEQ6S8J3 1075 aa13.69□□□□□ -0.22
LINC00871-202ENST00000556071 ZNF687Q8N1G0 1237 aa13.69□□□□□ -0.22
LINC00871-202ENST00000556071 ZC3H15Q8WU90 426 aaKnown RBP13.69□□□□□ -0.22
LINC00871-202ENST00000556071 PTPREP23469 700 aa13.68□□□□□ -0.22
LINC00871-202ENST00000556071 PTGDRQ13258 359 aa13.67□□□□□ -0.22
LINC00871-202ENST00000556071 TPRNQ4KMQ1 711 aa13.67□□□□□ -0.22
LINC00871-202ENST00000556071 KCNK17Q96T54 332 aa13.67□□□□□ -0.22
LINC00871-202ENST00000556071 NPDC1Q9NQX5 325 aaPredicted RBP13.67□□□□□ -0.22
LINC00871-202ENST00000556071 AXIN2Q9Y2T1 843 aa13.66□□□□□ -0.22
LINC00871-202ENST00000556071 COL9A1P20849 921 aa13.65□□□□□ -0.22
LINC00871-202ENST00000556071 FCHSD2O94868 740 aa13.64□□□□□ -0.23
LINC00871-202ENST00000556071 PSEN2P49810 448 aa13.64□□□□□ -0.23
LINC00871-202ENST00000556071 PPP1R3GB7ZBB8 358 aa13.62□□□□□ -0.23
LINC00871-202ENST00000556071 ARHGAP33O14559 1287 aa13.62□□□□□ -0.23
LINC00871-202ENST00000556071 PRKCSHP14314 528 aaPredicted RBP13.61□□□□□ -0.23
LINC00871-202ENST00000556071 PBX2P40425 430 aa13.61□□□□□ -0.23
LINC00871-202ENST00000556071 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
LINC00871-202ENST00000556071 HIC1Q14526 733 aa13.6□□□□□ -0.23
LINC00871-202ENST00000556071 CERKQ8TCT0 537 aa13.6□□□□□ -0.23
LINC00871-202ENST00000556071 ZMYND10O75800 440 aa13.59□□□□□ -0.23
LINC00871-202ENST00000556071 GNPATO15228 680 aa13.58□□□□□ -0.24
LINC00871-202ENST00000556071 DMRTA1Q5VZB9 504 aa13.58□□□□□ -0.24
LINC00871-202ENST00000556071 FECHP22830 423 aa13.57□□□□□ -0.24
LINC00871-202ENST00000556071 PRSS12P56730 875 aa13.54□□□□□ -0.24
LINC00871-202ENST00000556071 PROX2Q3B8N5 592 aa13.54□□□□□ -0.24
LINC00871-202ENST00000556071 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
LINC00871-202ENST00000556071 BARGINQ6ZT62 677 aa13.54□□□□□ -0.24
LINC00871-202ENST00000556071 CDCA7LQ96GN5 454 aa13.54□□□□□ -0.24
LINC00871-202ENST00000556071 ZBED2Q9BTP6 218 aa13.54□□□□□ -0.24
LINC00871-202ENST00000556071 RBM27Q9P2N5 1060 aaKnown RBP13.51□□□□□ -0.25
LINC00871-202ENST00000556071 FAM198AQ9UFP1 575 aa13.51□□□□□ -0.25
LINC00871-202ENST00000556071 TSKSQ9UJT2 592 aa13.51□□□□□ -0.25
LINC00871-202ENST00000556071 LSM11P83369 360 aaKnown RBP eCLIP13.5□□□□□ -0.25
LINC00871-202ENST00000556071 TTC13Q8NBP0 860 aa13.5□□□□□ -0.25
LINC00871-202ENST00000556071 KRTAP3-3Q9BYR6 98 aa13.5□□□□□ -0.25
LINC00871-202ENST00000556071 KRTAP3-2Q9BYR7 98 aa13.5□□□□□ -0.25
LINC00871-202ENST00000556071 TRIM6-TRIM34B2RNG4 842 aa13.49□□□□□ -0.25
LINC00871-202ENST00000556071 MAP2K5Q13163 448 aa13.48□□□□□ -0.25
LINC00871-202ENST00000556071 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
LINC00871-202ENST00000556071 KRI1Q8N9T8 703 aaKnown RBP13.47□□□□□ -0.25
LINC00871-202ENST00000556071 SLC24A3Q9HC58 644 aa13.47□□□□□ -0.25
LINC00871-202ENST00000556071 VPS9D1Q9Y2B5 631 aa13.47□□□□□ -0.25
LINC00871-202ENST00000556071 FAM161AQ3B820 660 aa13.45□□□□□ -0.26
LINC00871-202ENST00000556071 MINK1Q8N4C8 1332 aaPredicted RBP13.44□□□□□ -0.26
LINC00871-202ENST00000556071 ANKRD13DQ6ZTN6 518 aa13.44□□□□□ -0.26
LINC00871-202ENST00000556071 C3orf80F5H4A9 247 aa13.43□□□□□ -0.26
LINC00871-202ENST00000556071 TK2O00142 265 aa13.43□□□□□ -0.26
LINC00871-202ENST00000556071 IRF6O14896 467 aa13.43□□□□□ -0.26
LINC00871-202ENST00000556071 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
LINC00871-202ENST00000556071 ADGRD1Q6QNK2 874 aa13.43□□□□□ -0.26
LINC00871-202ENST00000556071 CCDC102AQ96A19 550 aa13.43□□□□□ -0.26
LINC00871-202ENST00000556071 KIAA1468Q9P260 1216 aa13.43□□□□□ -0.26
LINC00871-202ENST00000556071 PACS2Q86VP3 889 aa13.42□□□□□ -0.26
LINC00871-202ENST00000556071 ADGRG1Q9Y653 693 aa13.42□□□□□ -0.26
LINC00871-202ENST00000556071 RABGEF1Q9UJ41 708 aa13.41□□□□□ -0.26
LINC00871-202ENST00000556071 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
LINC00871-202ENST00000556071 TATDN2Q93075 761 aa13.39□□□□□ -0.27
LINC00871-202ENST00000556071 SMAPO00193 183 aa13.38□□□□□ -0.27
LINC00871-202ENST00000556071 NUDT18Q6ZVK8 323 aa13.38□□□□□ -0.27
LINC00871-202ENST00000556071 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
LINC00871-202ENST00000556071 AK7Q96M32 723 aa13.37□□□□□ -0.27
LINC00871-202ENST00000556071 BHMG1C9JSJ3 638 aaPredicted RBP13.36□□□□□ -0.27
LINC00871-202ENST00000556071 METTL3Q86U44 580 aaKnown RBP13.36□□□□□ -0.27
LINC00871-202ENST00000556071 SEPT9Q9UHD8 586 aaPredicted RBP13.36□□□□□ -0.27
LINC00871-202ENST00000556071 HRO43593 1189 aa13.35□□□□□ -0.27
LINC00871-202ENST00000556071 OATP04181 439 aa13.35□□□□□ -0.27
LINC00871-202ENST00000556071 PXYLP1Q8TE99 480 aa13.35□□□□□ -0.27
LINC00871-202ENST00000556071 EYA1Q99502 592 aa13.35□□□□□ -0.27
LINC00871-202ENST00000556071 RBM46Q8TBY0 533 aaKnown RBP13.34□□□□□ -0.27
LINC00871-202ENST00000556071 PHOX2BQ99453 314 aa13.34□□□□□ -0.27
LINC00871-202ENST00000556071 NBPF3Q9H094 633 aa13.33□□□□□ -0.28
LINC00871-202ENST00000556071 TRIM66O15016 1216 aa13.32□□□□□ -0.28
LINC00871-202ENST00000556071 NLRP7Q8WX94 980 aa13.3□□□□□ -0.28
LINC00871-202ENST00000556071 MRPL50Q8N5N7 158 aaKnown RBP13.29□□□□□ -0.28
LINC00871-202ENST00000556071 RCCD1A6NED2 376 aa13.28□□□□□ -0.28
LINC00871-202ENST00000556071 FAM98CQ17RN3 349 aaKnown RBP13.28□□□□□ -0.28
LINC00871-202ENST00000556071 LAPTM4BQ86VI4 370 aa13.27□□□□□ -0.29
LINC00871-202ENST00000556071 AMHR2Q16671 573 aa13.26□□□□□ -0.29
LINC00871-202ENST00000556071 STAC3Q96MF2 364 aa13.26□□□□□ -0.29
LINC00871-202ENST00000556071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.25□□□□□ -0.29
LINC00871-202ENST00000556071 DNAJB2P25686 324 aa13.25□□□□□ -0.29
LINC00871-202ENST00000556071 PDE4DQ08499 809 aa13.24□□□□□ -0.29
LINC00871-202ENST00000556071 MDM2Q00987 491 aaPredicted RBP13.23□□□□□ -0.29
LINC00871-202ENST00000556071 ZFRQ96KR1 1074 aaKnown RBP13.23□□□□□ -0.29
LINC00871-202ENST00000556071 TMEM134Q9H6X4 195 aa13.22□□□□□ -0.29
LINC00871-202ENST00000556071 TTLL12Q14166 644 aaPredicted RBP13.21□□□□□ -0.29
LINC00871-202ENST00000556071 PARP9Q8IXQ6 854 aa13.2□□□□□ -0.3
LINC00871-202ENST00000556071 REPIN1Q9BWE0 567 aaKnown RBP13.2□□□□□ -0.3
LINC00871-202ENST00000556071 GOLGA8CPA6NN73 597 aa13.19□□□□□ -0.3
LINC00871-202ENST00000556071 SWT1Q5T5J6 900 aaKnown RBP13.19□□□□□ -0.3
LINC00871-202ENST00000556071 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms