RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 KDM5DQ9BY66 1539 aa23.07■■□□□ 1.28
CHMP4BP1-201ENST00000556017 FAM135AQ9P2D6 1515 aa23.07■■□□□ 1.28
CHMP4BP1-201ENST00000556017 PZPP20742 1482 aa23.06■■□□□ 1.28
CHMP4BP1-201ENST00000556017 LRRC9Q6ZRR7 1453 aa23.05■■□□□ 1.28
CHMP4BP1-201ENST00000556017 KIF3BO15066 747 aa23.05■■□□□ 1.28
CHMP4BP1-201ENST00000556017 ILDR2Q71H61 639 aa23.05■■□□□ 1.28
CHMP4BP1-201ENST00000556017 POLR1AO95602 1720 aaPredicted RBP23.05■■□□□ 1.28
CHMP4BP1-201ENST00000556017 VPS8Q8N3P4 1428 aa23.03■■□□□ 1.28
CHMP4BP1-201ENST00000556017 RSPH4AQ5TD94 716 aa23.02■■□□□ 1.28
CHMP4BP1-201ENST00000556017 TNRQ92752 1358 aa23.01■■□□□ 1.27
CHMP4BP1-201ENST00000556017 RNF17Q9BXT8 1623 aaKnown RBP23.01■■□□□ 1.27
CHMP4BP1-201ENST00000556017 MAST1Q9Y2H9 1570 aa23.01■■□□□ 1.27
CHMP4BP1-201ENST00000556017 DISP3Q9P2K9 1392 aa23.01■■□□□ 1.27
CHMP4BP1-201ENST00000556017 LOC105371045A0A1W2PR82 267 aa23■■□□□ 1.27
CHMP4BP1-201ENST00000556017 MROH1Q8NDA8 1641 aa22.98■■□□□ 1.27
CHMP4BP1-201ENST00000556017 KANK4Q5T7N3 995 aaPredicted RBP22.98■■□□□ 1.27
CHMP4BP1-201ENST00000556017 SPATA31D1Q6ZQQ2 1576 aa22.97■■□□□ 1.27
CHMP4BP1-201ENST00000556017 MAP3K1Q13233 1512 aa22.96■■□□□ 1.27
CHMP4BP1-201ENST00000556017 ABCC3O15438 1527 aa22.95■■□□□ 1.26
CHMP4BP1-201ENST00000556017 MIA2Q96PC5 1412 aa22.95■■□□□ 1.26
CHMP4BP1-201ENST00000556017 WASHC2CQ9Y4E1 1318 aa22.95■■□□□ 1.26
CHMP4BP1-201ENST00000556017 EIF2AK4Q9P2K8 1649 aaKnown RBP22.93■■□□□ 1.26
CHMP4BP1-201ENST00000556017 ZC3H13Q5T200 1668 aaKnown RBP22.92■■□□□ 1.26
CHMP4BP1-201ENST00000556017 VWDEQ8N2E2 1590 aa22.92■■□□□ 1.26
CHMP4BP1-201ENST00000556017 NLRP1Q9C000 1473 aa22.92■■□□□ 1.26
CHMP4BP1-201ENST00000556017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.91■■□□□ 1.26
CHMP4BP1-201ENST00000556017 DEPDC5O75140 1603 aa22.9■■□□□ 1.26
CHMP4BP1-201ENST00000556017 UGGT1Q9NYU2 1555 aa22.9■■□□□ 1.26
CHMP4BP1-201ENST00000556017 UBAP1LF5GYI3 381 aa22.9■■□□□ 1.26
CHMP4BP1-201ENST00000556017 TSPY4P0CV99 314 aa22.9■■□□□ 1.26
CHMP4BP1-201ENST00000556017 TSPY10P0CW01 314 aa22.9■■□□□ 1.26
CHMP4BP1-201ENST00000556017 MED14O60244 1454 aa22.9■■□□□ 1.26
CHMP4BP1-201ENST00000556017 MYOM3Q5VTT5 1437 aa22.9■■□□□ 1.26
CHMP4BP1-201ENST00000556017 CEP152O94986 1710 aa22.89■■□□□ 1.26
CHMP4BP1-201ENST00000556017 SHANK2Q9UPX8 1470 aa22.89■■□□□ 1.25
CHMP4BP1-201ENST00000556017 ALKQ9UM73 1620 aa22.87■■□□□ 1.25
CHMP4BP1-201ENST00000556017 CPS1P31327 1500 aa22.87■■□□□ 1.25
CHMP4BP1-201ENST00000556017 CFAP65Q6ZU64 1925 aaKnown RBP22.86■■□□□ 1.25
CHMP4BP1-201ENST00000556017 STRCP1A6NGW2 1772 aa22.86■■□□□ 1.25
CHMP4BP1-201ENST00000556017 ERVK-7P63135 1459 aa22.85■■□□□ 1.25
CHMP4BP1-201ENST00000556017 CROCC2H7BZ55 1655 aa22.84■■□□□ 1.25
CHMP4BP1-201ENST00000556017 IQGAP1P46940 1657 aa22.84■■□□□ 1.25
CHMP4BP1-201ENST00000556017 SOCS7O14512 581 aa22.83■■□□□ 1.25
CHMP4BP1-201ENST00000556017 THEMISQ8N1K5 641 aaPredicted RBP22.83■■□□□ 1.25
CHMP4BP1-201ENST00000556017 UBR1Q8IWV7 1749 aa22.82■■□□□ 1.24
CHMP4BP1-201ENST00000556017 ANKLE2Q86XL3 938 aa22.82■■□□□ 1.24
CHMP4BP1-201ENST00000556017 DUOX2Q9NRD8 1548 aa22.82■■□□□ 1.24
CHMP4BP1-201ENST00000556017 NPHP4O75161 1426 aaPredicted RBP22.82■■□□□ 1.24
CHMP4BP1-201ENST00000556017 ABCC5O15440 1437 aa22.8■■□□□ 1.24
CHMP4BP1-201ENST00000556017 PRDM15P57071 1507 aaPredicted RBP22.79■■□□□ 1.24
CHMP4BP1-201ENST00000556017 PTPN23Q9H3S7 1636 aa22.78■■□□□ 1.24
CHMP4BP1-201ENST00000556017 KIF15Q9NS87 1388 aa22.75■■□□□ 1.23
CHMP4BP1-201ENST00000556017 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
CHMP4BP1-201ENST00000556017 HSPA1LP34931 641 aa22.74■■□□□ 1.23
CHMP4BP1-201ENST00000556017 ARHGAP23Q9P227 1491 aa22.73■■□□□ 1.23
CHMP4BP1-201ENST00000556017 LRRC7Q96NW7 1537 aa22.72■■□□□ 1.23
CHMP4BP1-201ENST00000556017 ERBINQ96RT1 1412 aa22.72■■□□□ 1.23
CHMP4BP1-201ENST00000556017 DAPK1P53355 1430 aa22.71■■□□□ 1.23
CHMP4BP1-201ENST00000556017 SLIT1O75093 1534 aa22.71■■□□□ 1.23
CHMP4BP1-201ENST00000556017 PIP4K2BP78356 416 aa22.7■■□□□ 1.22
CHMP4BP1-201ENST00000556017 XIRP1Q702N8 1843 aaKnown RBP22.69■■□□□ 1.22
CHMP4BP1-201ENST00000556017 FGD6Q6ZV73 1430 aa22.69■■□□□ 1.22
CHMP4BP1-201ENST00000556017 LTKP29376 864 aa22.69■■□□□ 1.22
CHMP4BP1-201ENST00000556017 PIK3C2BO00750 1634 aa22.68■■□□□ 1.22
CHMP4BP1-201ENST00000556017 SYNMO15061 1565 aa22.68■■□□□ 1.22
CHMP4BP1-201ENST00000556017 MED1Q15648 1581 aaPredicted RBP22.68■■□□□ 1.22
CHMP4BP1-201ENST00000556017 TOM1O60784 492 aa22.68■■□□□ 1.22
CHMP4BP1-201ENST00000556017 RRP7BPQ9NSQ0 103 aa22.68■■□□□ 1.22
CHMP4BP1-201ENST00000556017 SCAF11Q99590 1463 aaKnown RBP22.67■■□□□ 1.22
CHMP4BP1-201ENST00000556017 SCAF1Q9H7N4 1312 aaKnown RBP22.64■■□□□ 1.22
CHMP4BP1-201ENST00000556017 LMTK2Q8IWU2 1503 aa22.64■■□□□ 1.21
CHMP4BP1-201ENST00000556017 KDM5AP29375 1690 aaKnown RBP22.62■■□□□ 1.21
CHMP4BP1-201ENST00000556017 TXNDC2Q86VQ3 553 aa22.58■■□□□ 1.21
CHMP4BP1-201ENST00000556017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.58■■□□□ 1.21
CHMP4BP1-201ENST00000556017 CHIC2Q9UKJ5 165 aa22.57■■□□□ 1.2
CHMP4BP1-201ENST00000556017 TMEM2Q9UHN6 1383 aa22.57■■□□□ 1.2
CHMP4BP1-201ENST00000556017 ADGRL2O95490 1459 aa22.57■■□□□ 1.2
CHMP4BP1-201ENST00000556017 EFCAB6Q5THR3 1501 aa22.57■■□□□ 1.2
CHMP4BP1-201ENST00000556017 NOS1P29475 1434 aa22.56■■□□□ 1.2
CHMP4BP1-201ENST00000556017 TET3O43151 1660 aa22.55■■□□□ 1.2
CHMP4BP1-201ENST00000556017 ANKRD30AQ9BXX3 1397 aa22.55■■□□□ 1.2
CHMP4BP1-201ENST00000556017 IDI1Q13907 227 aa22.55■■□□□ 1.2
CHMP4BP1-201ENST00000556017 KANK1Q14678 1352 aa22.51■■□□□ 1.19
CHMP4BP1-201ENST00000556017 APLP2Q06481 763 aa22.51■■□□□ 1.19
CHMP4BP1-201ENST00000556017 ADGRB3O60242 1522 aa22.5■■□□□ 1.19
CHMP4BP1-201ENST00000556017 MYO5BQ9ULV0 1848 aa22.5■■□□□ 1.19
CHMP4BP1-201ENST00000556017 EID1Q9Y6B2 187 aa22.48■■□□□ 1.19
CHMP4BP1-201ENST00000556017 NWD1Q149M9 1564 aa22.45■■□□□ 1.18
CHMP4BP1-201ENST00000556017 ANKRD50Q9ULJ7 1429 aa22.43■■□□□ 1.18
CHMP4BP1-201ENST00000556017 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
CHMP4BP1-201ENST00000556017 RPRD2Q5VT52 1461 aaKnown RBP22.42■■□□□ 1.18
CHMP4BP1-201ENST00000556017 ZFYVE9O95405 1425 aa22.42■■□□□ 1.18
CHMP4BP1-201ENST00000556017 TMEM94Q12767 1356 aa22.42■■□□□ 1.18
CHMP4BP1-201ENST00000556017 SLC26A8Q96RN1 970 aa22.42■■□□□ 1.18
CHMP4BP1-201ENST00000556017 GCC2Q8IWJ2 1684 aa22.42■■□□□ 1.18
CHMP4BP1-201ENST00000556017 UNC13BO14795 1591 aa22.42■■□□□ 1.18
CHMP4BP1-201ENST00000556017 FAM135BQ49AJ0 1406 aa22.4■■□□□ 1.18
CHMP4BP1-201ENST00000556017 TMEM131LA2VDJ0 1609 aa22.4■■□□□ 1.18
CHMP4BP1-201ENST00000556017 KCNA6P17658 529 aa22.4■■□□□ 1.18
CHMP4BP1-201ENST00000556017 STAG3Q9UJ98 1225 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms