RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 KDM5DQ9BY66 1539 aa6.16□□□□□ -1.42
LINC00648-202ENST00000555985 ZC3H13Q5T200 1668 aaKnown RBP6.16□□□□□ -1.42
LINC00648-202ENST00000555985 VWDEQ8N2E2 1590 aa6.16□□□□□ -1.42
LINC00648-202ENST00000555985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.16□□□□□ -1.42
LINC00648-202ENST00000555985 DAPK1P53355 1430 aa6.15□□□□□ -1.42
LINC00648-202ENST00000555985 RSPH4AQ5TD94 716 aa6.15□□□□□ -1.42
LINC00648-202ENST00000555985 CLTCQ00610 1675 aaKnown RBP6.15□□□□□ -1.42
LINC00648-202ENST00000555985 PREX1Q8TCU6 1659 aa6.15□□□□□ -1.42
LINC00648-202ENST00000555985 DHX29Q7Z478 1369 aaKnown RBP6.15□□□□□ -1.43
LINC00648-202ENST00000555985 PRDM15P57071 1507 aaPredicted RBP6.15□□□□□ -1.43
LINC00648-202ENST00000555985 ZNF142P52746 1687 aaPredicted RBP6.15□□□□□ -1.43
LINC00648-202ENST00000555985 DUOX2Q9NRD8 1548 aa6.14□□□□□ -1.43
LINC00648-202ENST00000555985 HRCP23327 699 aa6.14□□□□□ -1.43
LINC00648-202ENST00000555985 LMTK3Q96Q04 1460 aa6.14□□□□□ -1.43
LINC00648-202ENST00000555985 SPAG9O60271 1321 aaKnown RBP6.14□□□□□ -1.43
LINC00648-202ENST00000555985 RRBP1Q9P2E9 1410 aaKnown RBP6.13□□□□□ -1.43
LINC00648-202ENST00000555985 PTPRKQ15262 1439 aa6.13□□□□□ -1.43
LINC00648-202ENST00000555985 ERBINQ96RT1 1412 aa6.13□□□□□ -1.43
LINC00648-202ENST00000555985 CNTLNQ9NXG0 1405 aa6.12□□□□□ -1.43
LINC00648-202ENST00000555985 LMTK2Q8IWU2 1503 aa6.12□□□□□ -1.43
LINC00648-202ENST00000555985 UNC13BO14795 1591 aa6.12□□□□□ -1.43
LINC00648-202ENST00000555985 POTEHQ6S545 545 aa6.12□□□□□ -1.43
LINC00648-202ENST00000555985 NPATQ14207 1427 aa6.11□□□□□ -1.43
LINC00648-202ENST00000555985 NCOA1Q15788 1441 aa6.11□□□□□ -1.43
LINC00648-202ENST00000555985 ABCC3O15438 1527 aa6.11□□□□□ -1.43
LINC00648-202ENST00000555985 CAMSAP1Q5T5Y3 1602 aa6.11□□□□□ -1.43
LINC00648-202ENST00000555985 MYO3AQ8NEV4 1616 aa6.11□□□□□ -1.43
LINC00648-202ENST00000555985 ZNF777Q9ULD5 760 aaPredicted RBP6.11□□□□□ -1.43
LINC00648-202ENST00000555985 CEP152O94986 1710 aa6.11□□□□□ -1.43
LINC00648-202ENST00000555985 STRCQ7RTU9 1775 aa6.11□□□□□ -1.43
LINC00648-202ENST00000555985 SPATA31D1Q6ZQQ2 1576 aa6.1□□□□□ -1.43
LINC00648-202ENST00000555985 ROCK1Q13464 1354 aa6.1□□□□□ -1.43
LINC00648-202ENST00000555985 GCC2Q8IWJ2 1684 aa6.1□□□□□ -1.43
LINC00648-202ENST00000555985 PZPP20742 1482 aa6.1□□□□□ -1.43
LINC00648-202ENST00000555985 KDM5AP29375 1690 aaKnown RBP6.09□□□□□ -1.44
LINC00648-202ENST00000555985 ARHGAP31Q2M1Z3 1444 aa6.08□□□□□ -1.44
LINC00648-202ENST00000555985 IQGAP3Q86VI3 1631 aa6.08□□□□□ -1.44
LINC00648-202ENST00000555985 SETD1BQ9UPS6 1966 aaKnown RBP6.08□□□□□ -1.44
LINC00648-202ENST00000555985 ZMYM3Q14202 1370 aa6.07□□□□□ -1.44
LINC00648-202ENST00000555985 KIF15Q9NS87 1388 aa6.07□□□□□ -1.44
LINC00648-202ENST00000555985 EFCAB6Q5THR3 1501 aa6.07□□□□□ -1.44
LINC00648-202ENST00000555985 TET3O43151 1660 aa6.07□□□□□ -1.44
LINC00648-202ENST00000555985 CEP170BQ9Y4F5 1589 aaPredicted RBP6.07□□□□□ -1.44
LINC00648-202ENST00000555985 PIK3C2BO00750 1634 aa6.06□□□□□ -1.44
LINC00648-202ENST00000555985 MYT1Q01538 1121 aa6.06□□□□□ -1.44
LINC00648-202ENST00000555985 APLP2Q06481 763 aa6.06□□□□□ -1.44
LINC00648-202ENST00000555985 ARID4BQ4LE39 1312 aaPredicted RBP6.06□□□□□ -1.44
LINC00648-202ENST00000555985 ANKRD30AQ9BXX3 1397 aa6.06□□□□□ -1.44
LINC00648-202ENST00000555985 SYNMO15061 1565 aa6.06□□□□□ -1.44
LINC00648-202ENST00000555985 UBR1Q8IWV7 1749 aa6.05□□□□□ -1.44
LINC00648-202ENST00000555985 ERVK-7P63135 1459 aa6.05□□□□□ -1.44
LINC00648-202ENST00000555985 E9PCH4 1651 aa6.05□□□□□ -1.44
LINC00648-202ENST00000555985 DCAF8L1A6NGE4 600 aa6.05□□□□□ -1.44
LINC00648-202ENST00000555985 TSPY4P0CV99 314 aa6.05□□□□□ -1.44
LINC00648-202ENST00000555985 TSPY10P0CW01 314 aa6.05□□□□□ -1.44
LINC00648-202ENST00000555985 NEURL4Q96JN8 1562 aa6.05□□□□□ -1.44
LINC00648-202ENST00000555985 PLA2R1Q13018 1463 aa6.05□□□□□ -1.44
LINC00648-202ENST00000555985 POLR1AO95602 1720 aaPredicted RBP6.04□□□□□ -1.44
LINC00648-202ENST00000555985 A2ML1A8K2U0 1454 aa6.04□□□□□ -1.44
LINC00648-202ENST00000555985 NOS1P29475 1434 aa6.04□□□□□ -1.44
LINC00648-202ENST00000555985 RPRD2Q5VT52 1461 aaKnown RBP6.04□□□□□ -1.44
LINC00648-202ENST00000555985 ANKRD50Q9ULJ7 1429 aa6.04□□□□□ -1.44
LINC00648-202ENST00000555985 NLRP1Q9C000 1473 aa6.03□□□□□ -1.44
LINC00648-202ENST00000555985 CEBPAP49715 358 aaPredicted RBP6.03□□□□□ -1.44
LINC00648-202ENST00000555985 NAIPQ13075 1403 aa6.03□□□□□ -1.44
LINC00648-202ENST00000555985 UHRF1BP1Q6BDS2 1440 aa6.03□□□□□ -1.44
LINC00648-202ENST00000555985 HFM1A2PYH4 1435 aa6.03□□□□□ -1.44
LINC00648-202ENST00000555985 KIF3BO15066 747 aa6.03□□□□□ -1.44
LINC00648-202ENST00000555985 MLECQ14165 292 aa6.03□□□□□ -1.44
LINC00648-202ENST00000555985 ARHGAP23Q9P227 1491 aa6.02□□□□□ -1.45
LINC00648-202ENST00000555985 SLIT1O75093 1534 aa6.02□□□□□ -1.45
LINC00648-202ENST00000555985 MED14O60244 1454 aa6.01□□□□□ -1.45
LINC00648-202ENST00000555985 RRP7BPQ9NSQ0 103 aa6.01□□□□□ -1.45
LINC00648-202ENST00000555985 PTPRTO14522 1441 aa6.01□□□□□ -1.45
LINC00648-202ENST00000555985 TMEM131LA2VDJ0 1609 aa6.01□□□□□ -1.45
LINC00648-202ENST00000555985 SPHKAPQ2M3C7 1700 aa6.01□□□□□ -1.45
LINC00648-202ENST00000555985 UGGT1Q9NYU2 1555 aa6.01□□□□□ -1.45
LINC00648-202ENST00000555985 TNRQ92752 1358 aa6□□□□□ -1.45
LINC00648-202ENST00000555985 LTBP4Q8N2S1 1624 aa6□□□□□ -1.45
LINC00648-202ENST00000555985 GGT6Q6P531 493 aa6□□□□□ -1.45
LINC00648-202ENST00000555985 ADGRB3O60242 1522 aa6□□□□□ -1.45
LINC00648-202ENST00000555985 MYO5BQ9ULV0 1848 aa6□□□□□ -1.45
LINC00648-202ENST00000555985 MYT1LQ9UL68 1186 aa5.99□□□□□ -1.45
LINC00648-202ENST00000555985 FAM50AQ14320 339 aaKnown RBP5.99□□□□□ -1.45
LINC00648-202ENST00000555985 FBXO31Q5XUX0 539 aaPredicted RBP5.99□□□□□ -1.45
LINC00648-202ENST00000555985 WASHC2CQ9Y4E1 1318 aa5.98□□□□□ -1.45
LINC00648-202ENST00000555985 CHIC2Q9UKJ5 165 aa5.98□□□□□ -1.45
LINC00648-202ENST00000555985 STRCP1A6NGW2 1772 aa5.98□□□□□ -1.45
LINC00648-202ENST00000555985 IQGAP1P46940 1657 aa5.98□□□□□ -1.45
LINC00648-202ENST00000555985 TRPM2O94759 1503 aa5.98□□□□□ -1.45
LINC00648-202ENST00000555985 PPARGC1BQ86YN6 1023 aaKnown RBP5.98□□□□□ -1.45
LINC00648-202ENST00000555985 SLC4A1APQ9BWU0 796 aaKnown RBP5.97□□□□□ -1.45
LINC00648-202ENST00000555985 CFAP65Q6ZU64 1925 aaKnown RBP5.97□□□□□ -1.45
LINC00648-202ENST00000555985 ZFYVE9O95405 1425 aa5.97□□□□□ -1.45
LINC00648-202ENST00000555985 CLTCL1P53675 1640 aa5.97□□□□□ -1.45
LINC00648-202ENST00000555985 KANK1Q14678 1352 aa5.97□□□□□ -1.45
LINC00648-202ENST00000555985 IFT172Q9UG01 1749 aa5.96□□□□□ -1.45
LINC00648-202ENST00000555985 HSPA2P54652 639 aa5.96□□□□□ -1.46
LINC00648-202ENST00000555985 IQSEC2Q5JU85 1478 aa5.96□□□□□ -1.46
LINC00648-202ENST00000555985 NRXN3Q9Y4C0 1643 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms