RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 C20orf194Q5TEA3 1177 aa18.8■□□□□ 0.6
SIX1-205ENST00000555955 RRP7BPQ9NSQ0 103 aa18.79■□□□□ 0.6
SIX1-205ENST00000555955 GRIN2AQ12879 1464 aa18.79■□□□□ 0.6
SIX1-205ENST00000555955 MRE11P49959 708 aa18.79■□□□□ 0.6
SIX1-205ENST00000555955 FOXD1Q16676 465 aa18.79■□□□□ 0.6
SIX1-205ENST00000555955 PDIA4P13667 645 aaKnown RBP18.77■□□□□ 0.6
SIX1-205ENST00000555955 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
SIX1-205ENST00000555955 MPHOSPH9Q99550 1183 aa18.77■□□□□ 0.59
SIX1-205ENST00000555955 ANTXR1Q9H6X2 564 aa18.77■□□□□ 0.59
SIX1-205ENST00000555955 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
SIX1-205ENST00000555955 ARID3AQ99856 593 aa18.76■□□□□ 0.59
SIX1-205ENST00000555955 CHD1O14646 1710 aa18.76■□□□□ 0.59
SIX1-205ENST00000555955 MYOM3Q5VTT5 1437 aa18.76■□□□□ 0.59
SIX1-205ENST00000555955 USP19O94966 1318 aa18.76■□□□□ 0.59
SIX1-205ENST00000555955 TRIM44Q96DX7 344 aaPredicted RBP18.76■□□□□ 0.59
SIX1-205ENST00000555955 KIAA1211Q6ZU35 1233 aa18.75■□□□□ 0.59
SIX1-205ENST00000555955 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
SIX1-205ENST00000555955 ZHX1Q9UKY1 873 aaPredicted RBP18.73■□□□□ 0.59
SIX1-205ENST00000555955 MIA2Q96PC5 1412 aa18.73■□□□□ 0.59
SIX1-205ENST00000555955 GRPEL1Q9HAV7 217 aa18.73■□□□□ 0.59
SIX1-205ENST00000555955 CHIC2Q9UKJ5 165 aa18.73■□□□□ 0.59
SIX1-205ENST00000555955 NUP160Q12769 1436 aa18.72■□□□□ 0.59
SIX1-205ENST00000555955 MCM4P33991 863 aa18.72■□□□□ 0.59
SIX1-205ENST00000555955 CEP170Q5SW79 1584 aa18.71■□□□□ 0.59
SIX1-205ENST00000555955 HECW1Q76N89 1606 aa18.71■□□□□ 0.59
SIX1-205ENST00000555955 BBXQ8WY36 941 aaPredicted RBP18.71■□□□□ 0.59
SIX1-205ENST00000555955 KIF15Q9NS87 1388 aa18.71■□□□□ 0.59
SIX1-205ENST00000555955 EFCAB5A4FU69 1503 aa18.7■□□□□ 0.58
SIX1-205ENST00000555955 SAMD9Q5K651 1589 aa18.7■□□□□ 0.58
SIX1-205ENST00000555955 TRAK2O60296 914 aa18.69■□□□□ 0.58
SIX1-205ENST00000555955 IQGAP2Q13576 1575 aa18.69■□□□□ 0.58
SIX1-205ENST00000555955 SEC24BO95487 1268 aa18.69■□□□□ 0.58
SIX1-205ENST00000555955 RALBP1Q15311 655 aa18.69■□□□□ 0.58
SIX1-205ENST00000555955 FYCO1Q9BQS8 1478 aa18.68■□□□□ 0.58
SIX1-205ENST00000555955 MTUS2Q5JR59 1369 aa18.68■□□□□ 0.58
SIX1-205ENST00000555955 BCORL1Q5H9F3 1711 aa18.67■□□□□ 0.58
SIX1-205ENST00000555955 PRDM10Q9NQV6 1147 aa18.67■□□□□ 0.58
SIX1-205ENST00000555955 USP47Q96K76 1375 aa18.67■□□□□ 0.58
SIX1-205ENST00000555955 RPRD2Q5VT52 1461 aaKnown RBP18.66■□□□□ 0.58
SIX1-205ENST00000555955 TEX14Q8IWB6 1497 aa18.66■□□□□ 0.58
SIX1-205ENST00000555955 KIAA0586Q9BVV6 1533 aa18.66■□□□□ 0.58
SIX1-205ENST00000555955 FAM13BQ9NYF5 915 aa18.66■□□□□ 0.58
SIX1-205ENST00000555955 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
SIX1-205ENST00000555955 ROCK2O75116 1388 aaKnown RBP18.65■□□□□ 0.58
SIX1-205ENST00000555955 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
SIX1-205ENST00000555955 MAP7D2Q96T17 732 aa18.65■□□□□ 0.58
SIX1-205ENST00000555955 RIPK4P57078 832 aa18.64■□□□□ 0.58
SIX1-205ENST00000555955 CASKIN1Q8WXD9 1431 aa18.64■□□□□ 0.58
SIX1-205ENST00000555955 SPRYD3Q8NCJ5 442 aa18.63■□□□□ 0.57
SIX1-205ENST00000555955 NLRP13Q86W25 1043 aa18.62■□□□□ 0.57
SIX1-205ENST00000555955 SMAP1Q8IYB5 467 aaPredicted RBP18.62■□□□□ 0.57
SIX1-205ENST00000555955 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
SIX1-205ENST00000555955 ANKRD30BQ9BXX2 1392 aa18.62■□□□□ 0.57
SIX1-205ENST00000555955 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
SIX1-205ENST00000555955 CHMP4BQ9H444 224 aaKnown RBP18.62■□□□□ 0.57
SIX1-205ENST00000555955 SHROOM2Q13796 1616 aa18.62■□□□□ 0.57
SIX1-205ENST00000555955 ISY1Q9ULR0 285 aaKnown RBP18.61■□□□□ 0.57
SIX1-205ENST00000555955 CLASP1Q7Z460 1538 aa18.6■□□□□ 0.57
SIX1-205ENST00000555955 OFD1O75665 1012 aa18.59■□□□□ 0.57
SIX1-205ENST00000555955 GTF2E1P29083 439 aaPredicted RBP18.59■□□□□ 0.57
SIX1-205ENST00000555955 NAP1L2Q9ULW6 460 aaPredicted RBP18.59■□□□□ 0.57
SIX1-205ENST00000555955 KDM6BO15054 1643 aa18.58■□□□□ 0.57
SIX1-205ENST00000555955 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.56■□□□□ 0.56
SIX1-205ENST00000555955 UPF2Q9HAU5 1272 aaKnown RBP18.56■□□□□ 0.56
SIX1-205ENST00000555955 VIRMAQ69YN4 1812 aaKnown RBP18.56■□□□□ 0.56
SIX1-205ENST00000555955 TERF1P54274 439 aa18.56■□□□□ 0.56
SIX1-205ENST00000555955 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.56■□□□□ 0.56
SIX1-205ENST00000555955 GCC2Q8IWJ2 1684 aa18.55■□□□□ 0.56
SIX1-205ENST00000555955 CHMP5Q9NZZ3 219 aa18.55■□□□□ 0.56
SIX1-205ENST00000555955 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
SIX1-205ENST00000555955 ZSCAN30Q86W11 494 aa18.54■□□□□ 0.56
SIX1-205ENST00000555955 NLRP1Q9C000 1473 aa18.54■□□□□ 0.56
SIX1-205ENST00000555955 KIAA0556O60303 1618 aa18.53■□□□□ 0.56
SIX1-205ENST00000555955 GAS2L3Q86XJ1 694 aa18.53■□□□□ 0.56
SIX1-205ENST00000555955 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
SIX1-205ENST00000555955 DDX11L8A8MPP1 907 aa18.52■□□□□ 0.56
SIX1-205ENST00000555955 R3HCC1Q9Y3T6 440 aaKnown RBP18.52■□□□□ 0.56
SIX1-205ENST00000555955 MSNP26038 577 aaKnown RBP18.52■□□□□ 0.55
SIX1-205ENST00000555955 TBC1D32Q96NH3 1257 aa18.52■□□□□ 0.55
SIX1-205ENST00000555955 CANXP27824 592 aaKnown RBP18.51■□□□□ 0.55
SIX1-205ENST00000555955 IGHDP01880 384 aa18.51■□□□□ 0.55
SIX1-205ENST00000555955 MAPK8IP3Q9UPT6 1336 aa18.51■□□□□ 0.55
SIX1-205ENST00000555955 SLC4A1APQ9BWU0 796 aaKnown RBP18.5■□□□□ 0.55
SIX1-205ENST00000555955 DISP1Q96F81 1524 aa18.5■□□□□ 0.55
SIX1-205ENST00000555955 MTERF4Q7Z6M4 381 aaKnown RBP18.49■□□□□ 0.55
SIX1-205ENST00000555955 CCDC173Q0VFZ6 552 aa18.48■□□□□ 0.55
SIX1-205ENST00000555955 KDM5CP41229 1560 aa18.48■□□□□ 0.55
SIX1-205ENST00000555955 DUSP27Q5VZP5 1158 aa18.47■□□□□ 0.55
SIX1-205ENST00000555955 PARD3Q8TEW0 1356 aa18.47■□□□□ 0.55
SIX1-205ENST00000555955 BLMP54132 1417 aaPredicted RBP18.47■□□□□ 0.55
SIX1-205ENST00000555955 DMTNQ08495 405 aa18.46■□□□□ 0.55
SIX1-205ENST00000555955 UTP14CQ5TAP6 766 aaKnown RBP18.46■□□□□ 0.55
SIX1-205ENST00000555955 UQCRHLA0A096LP55 91 aa18.46■□□□□ 0.55
SIX1-205ENST00000555955 UQCRHP07919 91 aa18.46■□□□□ 0.55
SIX1-205ENST00000555955 NCLP19338 710 aaKnown RBP18.46■□□□□ 0.55
SIX1-205ENST00000555955 PLEKHH2Q8IVE3 1493 aa18.45■□□□□ 0.54
SIX1-205ENST00000555955 PPP1R9BQ96SB3 815 aa18.45■□□□□ 0.54
SIX1-205ENST00000555955 ZMYM4Q5VZL5 1548 aa18.45■□□□□ 0.54
SIX1-205ENST00000555955 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
SIX1-205ENST00000555955 ANP32BQ92688 251 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms