RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 YEATS2Q9ULM3 1422 aa11.37□□□□□ -0.59
PCNX4-211ENST00000555929 DNMT1P26358 1616 aaKnown RBP11.37□□□□□ -0.59
PCNX4-211ENST00000555929 MLECQ14165 292 aa11.36□□□□□ -0.59
PCNX4-211ENST00000555929 MLH3Q9UHC1 1453 aa11.36□□□□□ -0.59
PCNX4-211ENST00000555929 FRMPD1Q5SYB0 1578 aa11.36□□□□□ -0.59
PCNX4-211ENST00000555929 RTEL1-TNFRSF6BF6WH68 1400 aa11.35□□□□□ -0.59
PCNX4-211ENST00000555929 KIF15Q9NS87 1388 aa11.35□□□□□ -0.59
PCNX4-211ENST00000555929 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
PCNX4-211ENST00000555929 ZFYVE16Q7Z3T8 1539 aa11.35□□□□□ -0.59
PCNX4-211ENST00000555929 KDM5CP41229 1560 aa11.34□□□□□ -0.59
PCNX4-211ENST00000555929 MAGI2Q86UL8 1455 aa11.34□□□□□ -0.59
PCNX4-211ENST00000555929 SHANK2Q9UPX8 1470 aa11.34□□□□□ -0.59
PCNX4-211ENST00000555929 RICTORQ6R327 1708 aa11.34□□□□□ -0.59
PCNX4-211ENST00000555929 NCOA1Q15788 1441 aa11.34□□□□□ -0.59
PCNX4-211ENST00000555929 HECW2Q9P2P5 1572 aa11.33□□□□□ -0.6
PCNX4-211ENST00000555929 ATP10AO60312 1499 aa11.33□□□□□ -0.6
PCNX4-211ENST00000555929 KIF3BO15066 747 aa11.33□□□□□ -0.6
PCNX4-211ENST00000555929 ROCK1Q13464 1354 aa11.32□□□□□ -0.6
PCNX4-211ENST00000555929 DHX29Q7Z478 1369 aaKnown RBP11.32□□□□□ -0.6
PCNX4-211ENST00000555929 ZMYM4Q5VZL5 1548 aa11.32□□□□□ -0.6
PCNX4-211ENST00000555929 GGT6Q6P531 493 aa11.32□□□□□ -0.6
PCNX4-211ENST00000555929 TRIM52Q96A61 297 aa11.31□□□□□ -0.6
PCNX4-211ENST00000555929 A2MP01023 1474 aa11.31□□□□□ -0.6
PCNX4-211ENST00000555929 INO80Q9ULG1 1556 aaPredicted RBP11.3□□□□□ -0.6
PCNX4-211ENST00000555929 MAST1Q9Y2H9 1570 aa11.3□□□□□ -0.6
PCNX4-211ENST00000555929 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
PCNX4-211ENST00000555929 KIDINS220Q9ULH0 1771 aa11.3□□□□□ -0.6
PCNX4-211ENST00000555929 ADGRL2O95490 1459 aa11.3□□□□□ -0.6
PCNX4-211ENST00000555929 CROCC2H7BZ55 1655 aa11.29□□□□□ -0.6
PCNX4-211ENST00000555929 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
PCNX4-211ENST00000555929 ABCA6Q8N139 1617 aa11.28□□□□□ -0.6
PCNX4-211ENST00000555929 SETD5Q9C0A6 1442 aa11.28□□□□□ -0.6
PCNX4-211ENST00000555929 ANKRD50Q9ULJ7 1429 aa11.28□□□□□ -0.6
PCNX4-211ENST00000555929 ESF1Q9H501 851 aaKnown RBP11.28□□□□□ -0.6
PCNX4-211ENST00000555929 ARHGEF40Q8TER5 1519 aa11.28□□□□□ -0.6
PCNX4-211ENST00000555929 HFM1A2PYH4 1435 aa11.27□□□□□ -0.6
PCNX4-211ENST00000555929 NAIPQ13075 1403 aa11.27□□□□□ -0.6
PCNX4-211ENST00000555929 DUOX2Q9NRD8 1548 aa11.27□□□□□ -0.61
PCNX4-211ENST00000555929 PLXNC1O60486 1568 aa11.25□□□□□ -0.61
PCNX4-211ENST00000555929 ADGBQ8N7X0 1667 aa11.25□□□□□ -0.61
PCNX4-211ENST00000555929 RAB3GAP2Q9H2M9 1393 aa11.25□□□□□ -0.61
PCNX4-211ENST00000555929 ERBINQ96RT1 1412 aa11.25□□□□□ -0.61
PCNX4-211ENST00000555929 WASHC2CQ9Y4E1 1318 aa11.24□□□□□ -0.61
PCNX4-211ENST00000555929 NUP155O75694 1391 aa11.23□□□□□ -0.61
PCNX4-211ENST00000555929 KANK1Q14678 1352 aa11.23□□□□□ -0.61
PCNX4-211ENST00000555929 SPDYE2BA6NHP3 402 aa11.21□□□□□ -0.61
PCNX4-211ENST00000555929 SPDYE6P0CI01 402 aa11.21□□□□□ -0.61
PCNX4-211ENST00000555929 SPDYE2Q495Y8 402 aa11.21□□□□□ -0.61
PCNX4-211ENST00000555929 AGLP35573 1532 aa11.19□□□□□ -0.62
PCNX4-211ENST00000555929 REREQ9P2R6 1566 aa11.19□□□□□ -0.62
PCNX4-211ENST00000555929 HRCP23327 699 aa11.18□□□□□ -0.62
PCNX4-211ENST00000555929 SIGLEC1Q9BZZ2 1709 aa11.18□□□□□ -0.62
PCNX4-211ENST00000555929 CEBPAP49715 358 aaPredicted RBP11.17□□□□□ -0.62
PCNX4-211ENST00000555929 MPHOSPH9Q99550 1183 aa11.17□□□□□ -0.62
PCNX4-211ENST00000555929 GCC2Q8IWJ2 1684 aa11.17□□□□□ -0.62
PCNX4-211ENST00000555929 ACIN1Q9UKV3 1341 aaKnown RBP11.16□□□□□ -0.62
PCNX4-211ENST00000555929 PITPNM1O00562 1244 aa11.16□□□□□ -0.62
PCNX4-211ENST00000555929 PKD2Q13563 968 aa11.16□□□□□ -0.62
PCNX4-211ENST00000555929 KDM4FA0A1W2PPD8 638 aa11.15□□□□□ -0.62
PCNX4-211ENST00000555929 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
PCNX4-211ENST00000555929 EIF2AK4Q9P2K8 1649 aaKnown RBP11.15□□□□□ -0.62
PCNX4-211ENST00000555929 ZMYM3Q14202 1370 aa11.14□□□□□ -0.63
PCNX4-211ENST00000555929 FBXO31Q5XUX0 539 aaPredicted RBP11.13□□□□□ -0.63
PCNX4-211ENST00000555929 CNTLNQ9NXG0 1405 aa11.12□□□□□ -0.63
PCNX4-211ENST00000555929 FAM135AQ9P2D6 1515 aa11.12□□□□□ -0.63
PCNX4-211ENST00000555929 RNF17Q9BXT8 1623 aaKnown RBP11.12□□□□□ -0.63
PCNX4-211ENST00000555929 BCORL1Q5H9F3 1711 aa11.12□□□□□ -0.63
PCNX4-211ENST00000555929 ABCC3O15438 1527 aa11.11□□□□□ -0.63
PCNX4-211ENST00000555929 KDM5DQ9BY66 1539 aa11.11□□□□□ -0.63
PCNX4-211ENST00000555929 MROH1Q8NDA8 1641 aa11.11□□□□□ -0.63
PCNX4-211ENST00000555929 UNC13BO14795 1591 aa11.11□□□□□ -0.63
PCNX4-211ENST00000555929 PRDM15P57071 1507 aaPredicted RBP11.1□□□□□ -0.63
PCNX4-211ENST00000555929 CCER1Q8TC90 406 aaPredicted RBP11.1□□□□□ -0.63
PCNX4-211ENST00000555929 PZPP20742 1482 aa11.1□□□□□ -0.63
PCNX4-211ENST00000555929 MADDQ8WXG6 1647 aa11.09□□□□□ -0.63
PCNX4-211ENST00000555929 DEPDC5O75140 1603 aa11.09□□□□□ -0.63
PCNX4-211ENST00000555929 CLTCQ00610 1675 aaKnown RBP11.08□□□□□ -0.64
PCNX4-211ENST00000555929 CHGAP10645 457 aaKnown RBP11.08□□□□□ -0.64
PCNX4-211ENST00000555929 FXR2P51116 673 aaKnown RBP eCLIP11.08□□□□□ -0.64
PCNX4-211ENST00000555929 VWDEQ8N2E2 1590 aa11.07□□□□□ -0.64
PCNX4-211ENST00000555929 DHX57Q6P158 1386 aaKnown RBP11.07□□□□□ -0.64
PCNX4-211ENST00000555929 MKRN4PQ13434 485 aaPredicted RBP11.07□□□□□ -0.64
PCNX4-211ENST00000555929 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
PCNX4-211ENST00000555929 NPATQ14207 1427 aa11.07□□□□□ -0.64
PCNX4-211ENST00000555929 ADAMTSL3P82987 1691 aa11.07□□□□□ -0.64
PCNX4-211ENST00000555929 RIMS1Q86UR5 1692 aaKnown RBP11.07□□□□□ -0.64
PCNX4-211ENST00000555929 CEP152O94986 1710 aa11.06□□□□□ -0.64
PCNX4-211ENST00000555929 PTPRMP28827 1452 aa11.06□□□□□ -0.64
PCNX4-211ENST00000555929 IQGAP3Q86VI3 1631 aa11.06□□□□□ -0.64
PCNX4-211ENST00000555929 FER1L4A9Z1Z3 1794 aa11.06□□□□□ -0.64
PCNX4-211ENST00000555929 LMTK2Q8IWU2 1503 aa11.06□□□□□ -0.64
PCNX4-211ENST00000555929 NEUROD1Q13562 356 aa11.06□□□□□ -0.64
PCNX4-211ENST00000555929 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
PCNX4-211ENST00000555929 ARHGAP31Q2M1Z3 1444 aa11.05□□□□□ -0.64
PCNX4-211ENST00000555929 EFCAB6Q5THR3 1501 aa11.04□□□□□ -0.64
PCNX4-211ENST00000555929 TNRQ92752 1358 aa11.04□□□□□ -0.64
PCNX4-211ENST00000555929 SPDYE1Q8NFV5 336 aaPredicted RBP11.04□□□□□ -0.64
PCNX4-211ENST00000555929 CAMSAP1Q5T5Y3 1602 aa11.04□□□□□ -0.64
PCNX4-211ENST00000555929 TET3O43151 1660 aa11.04□□□□□ -0.64
PCNX4-211ENST00000555929 ZC3H13Q5T200 1668 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms