RNA–Protein interactions for RNA: ENST00000555671.1

MLH3-209, Transcript of mutL homolog 3, humanhuman

TSL 5

Gene MLH3, Length 931 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-209ENST00000555671 CERKQ8TCT0 537 aa8.89□□□□□ -0.99
MLH3-209ENST00000555671 ZSWIM6Q9HCJ5 1215 aa8.88□□□□□ -0.99
MLH3-209ENST00000555671 PCDHGA10Q9Y5H3 936 aa8.88□□□□□ -0.99
MLH3-209ENST00000555671 SNPHO15079 494 aa8.87□□□□□ -0.99
MLH3-209ENST00000555671 AMHR2Q16671 573 aa8.87□□□□□ -0.99
MLH3-209ENST00000555671 ZDHHC16Q969W1 377 aa8.87□□□□□ -0.99
MLH3-209ENST00000555671 NUDT7P0C024 238 aa8.86□□□□□ -0.99
MLH3-209ENST00000555671 TIMELESSQ9UNS1 1208 aa8.86□□□□□ -0.99
MLH3-209ENST00000555671 PSDA5PKW4 1024 aaPredicted RBP8.85□□□□□ -0.99
MLH3-209ENST00000555671 KCNH8Q96L42 1107 aa8.85□□□□□ -0.99
MLH3-209ENST00000555671 CDHR5Q9HBB8 845 aa8.85□□□□□ -0.99
MLH3-209ENST00000555671 ATP1B4Q9UN42 357 aaPredicted RBP8.85□□□□□ -0.99
MLH3-209ENST00000555671 FECHP22830 423 aa8.84□□□□□ -0.99
MLH3-209ENST00000555671 CLCN1P35523 988 aa8.84□□□□□ -0.99
MLH3-209ENST00000555671 OATP04181 439 aa8.83□□□□□ -1
MLH3-209ENST00000555671 FOSBP53539 338 aa8.83□□□□□ -1
MLH3-209ENST00000555671 TSR1Q2NL82 804 aaKnown RBP8.83□□□□□ -1
MLH3-209ENST00000555671 ARSIQ5FYB1 569 aa8.83□□□□□ -1
MLH3-209ENST00000555671 PPP4R3BQ5MIZ7 849 aa8.83□□□□□ -1
MLH3-209ENST00000555671 PARP9Q8IXQ6 854 aa8.83□□□□□ -1
MLH3-209ENST00000555671 PRIM1P49642 420 aaKnown RBP8.82□□□□□ -1
MLH3-209ENST00000555671 C6orf132Q5T0Z8 1188 aa8.81□□□□□ -1
MLH3-209ENST00000555671 GIGYF2Q6Y7W6 1299 aaKnown RBP8.8□□□□□ -1
MLH3-209ENST00000555671 FAM117AQ9C073 453 aa8.79□□□□□ -1
MLH3-209ENST00000555671 GPCPD1Q9NPB8 672 aa8.79□□□□□ -1
MLH3-209ENST00000555671 MDM2Q00987 491 aaPredicted RBP8.78□□□□□ -1
MLH3-209ENST00000555671 RBM46Q8TBY0 533 aaKnown RBP8.78□□□□□ -1
MLH3-209ENST00000555671 RBM27Q9P2N5 1060 aaKnown RBP8.78□□□□□ -1
MLH3-209ENST00000555671 POTEMA6NI47 508 aa8.77□□□□□ -1.01
MLH3-209ENST00000555671 PADI6Q6TGC4 694 aa8.77□□□□□ -1.01
MLH3-209ENST00000555671 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
MLH3-209ENST00000555671 PTPREP23469 700 aa8.76□□□□□ -1.01
MLH3-209ENST00000555671 KHSRPQ92945 711 aaKnown RBP eCLIP8.76□□□□□ -1.01
MLH3-209ENST00000555671 PCMTD1Q96MG8 357 aaPredicted RBP8.76□□□□□ -1.01
MLH3-209ENST00000555671 HOXB3P14651 431 aaPredicted RBP8.75□□□□□ -1.01
MLH3-209ENST00000555671 LCE2DQ5TA82 110 aaPredicted RBP8.75□□□□□ -1.01
MLH3-209ENST00000555671 ADAM33Q9BZ11 813 aa8.75□□□□□ -1.01
MLH3-209ENST00000555671 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
MLH3-209ENST00000555671 LHX6Q9UPM6 363 aa8.75□□□□□ -1.01
MLH3-209ENST00000555671 PRSS12P56730 875 aa8.74□□□□□ -1.01
MLH3-209ENST00000555671 GPR153Q6NV75 609 aa8.74□□□□□ -1.01
MLH3-209ENST00000555671 POTEGQ6S5H5 508 aa8.74□□□□□ -1.01
MLH3-209ENST00000555671 KDM4FA0A1W2PPD8 638 aa8.73□□□□□ -1.01
MLH3-209ENST00000555671 METTL3Q86U44 580 aaKnown RBP8.73□□□□□ -1.01
MLH3-209ENST00000555671 CDCA7LQ96GN5 454 aa8.73□□□□□ -1.01
MLH3-209ENST00000555671 NBPF26B4DH59 902 aa8.72□□□□□ -1.01
MLH3-209ENST00000555671 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
MLH3-209ENST00000555671 PLSCR2Q9NRY7 297 aa8.72□□□□□ -1.01
MLH3-209ENST00000555671 SSTR3P32745 418 aaPredicted RBP8.71□□□□□ -1.02
MLH3-209ENST00000555671 PACS2Q86VP3 889 aa8.71□□□□□ -1.02
MLH3-209ENST00000555671 ADGRG1Q9Y653 693 aa8.71□□□□□ -1.02
MLH3-209ENST00000555671 PPP1R3GB7ZBB8 358 aa8.7□□□□□ -1.02
MLH3-209ENST00000555671 DIXDC1Q155Q3 683 aa8.7□□□□□ -1.02
MLH3-209ENST00000555671 FAM161AQ3B820 660 aa8.7□□□□□ -1.02
MLH3-209ENST00000555671 PXYLP1Q8TE99 480 aa8.7□□□□□ -1.02
MLH3-209ENST00000555671 GOPCQ9HD26 462 aa8.7□□□□□ -1.02
MLH3-209ENST00000555671 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.69□□□□□ -1.02
MLH3-209ENST00000555671 MS4A1P11836 297 aa8.69□□□□□ -1.02
MLH3-209ENST00000555671 BEGAINQ9BUH8 593 aa8.69□□□□□ -1.02
MLH3-209ENST00000555671 PLEKHG3A1L390 1219 aa8.68□□□□□ -1.02
MLH3-209ENST00000555671 HOXB1P14653 301 aaPredicted RBP8.68□□□□□ -1.02
MLH3-209ENST00000555671 SLC4A3P48751 1232 aa8.68□□□□□ -1.02
MLH3-209ENST00000555671 SULF1Q8IWU6 871 aa8.68□□□□□ -1.02
MLH3-209ENST00000555671 KCNK17Q96T54 332 aa8.67□□□□□ -1.02
MLH3-209ENST00000555671 HDGFP51858 240 aaKnown RBP8.66□□□□□ -1.02
MLH3-209ENST00000555671 FLIIQ13045 1269 aa8.66□□□□□ -1.02
MLH3-209ENST00000555671 RSPH4AQ5TD94 716 aa8.66□□□□□ -1.02
MLH3-209ENST00000555671 FAM217BQ9NTX9 383 aaPredicted RBP8.66□□□□□ -1.02
MLH3-209ENST00000555671 PNMA3Q9UL41 463 aa8.66□□□□□ -1.02
MLH3-209ENST00000555671 SH3D19Q5HYK7 790 aa8.65□□□□□ -1.02
MLH3-209ENST00000555671 PCDH10Q9P2E7 1040 aa8.65□□□□□ -1.02
MLH3-209ENST00000555671 ERBB3P21860 1342 aa8.64□□□□□ -1.03
MLH3-209ENST00000555671 DNAJB2P25686 324 aa8.64□□□□□ -1.03
MLH3-209ENST00000555671 NLRP7Q8WX94 980 aa8.64□□□□□ -1.03
MLH3-209ENST00000555671 PHOX2BQ99453 314 aa8.64□□□□□ -1.03
MLH3-209ENST00000555671 REPIN1Q9BWE0 567 aaKnown RBP8.64□□□□□ -1.03
MLH3-209ENST00000555671 RCCD1A6NED2 376 aa8.63□□□□□ -1.03
MLH3-209ENST00000555671 TRIM6-TRIM34B2RNG4 842 aa8.63□□□□□ -1.03
MLH3-209ENST00000555671 COL9A1P20849 921 aa8.63□□□□□ -1.03
MLH3-209ENST00000555671 NUDT18Q6ZVK8 323 aa8.63□□□□□ -1.03
MLH3-209ENST00000555671 NUTM1Q86Y26 1132 aa8.63□□□□□ -1.03
MLH3-209ENST00000555671 TTC13Q8NBP0 860 aa8.63□□□□□ -1.03
MLH3-209ENST00000555671 SKIV2LQ15477 1246 aaKnown RBP8.62□□□□□ -1.03
MLH3-209ENST00000555671 TMUB1Q9BVT8 246 aa8.62□□□□□ -1.03
MLH3-209ENST00000555671 DDX11L8A8MPP1 907 aa8.61□□□□□ -1.03
MLH3-209ENST00000555671 RDH13Q8NBN7 331 aa8.61□□□□□ -1.03
MLH3-209ENST00000555671 TATDN2Q93075 761 aa8.61□□□□□ -1.03
MLH3-209ENST00000555671 FAM163AQ96GL9 167 aaPredicted RBP8.6□□□□□ -1.03
MLH3-209ENST00000555671 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
MLH3-209ENST00000555671 TSKSQ9UJT2 592 aa8.6□□□□□ -1.03
MLH3-209ENST00000555671 ONECUT3O60422 494 aaPredicted RBP8.59□□□□□ -1.03
MLH3-209ENST00000555671 ZMYND15Q9H091 742 aa8.59□□□□□ -1.03
MLH3-209ENST00000555671 SUPT5HO00267 1087 aaKnown RBP8.58□□□□□ -1.04
MLH3-209ENST00000555671 CLK2P49760 499 aaKnown RBP8.58□□□□□ -1.04
MLH3-209ENST00000555671 EMP3P54852 163 aa8.57□□□□□ -1.04
MLH3-209ENST00000555671 VARS2Q5ST30 1063 aaKnown RBP8.57□□□□□ -1.04
MLH3-209ENST00000555671 EYA1Q99502 592 aa8.57□□□□□ -1.04
MLH3-209ENST00000555671 TBC1D2Q9BYX2 928 aa8.57□□□□□ -1.04
MLH3-209ENST00000555671 ARHGAP33O14559 1287 aa8.56□□□□□ -1.04
MLH3-209ENST00000555671 UBTFP17480 764 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms