RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 CAMSAP1Q5T5Y3 1602 aa23.99■■□□□ 1.43
SNX6-205ENST00000555648 FBXO31Q5XUX0 539 aaPredicted RBP23.99■■□□□ 1.43
SNX6-205ENST00000555648 NCKAP5LQ9HCH0 1330 aa23.99■■□□□ 1.43
SNX6-205ENST00000555648 FAM135AQ9P2D6 1515 aa23.99■■□□□ 1.43
SNX6-205ENST00000555648 TNRQ92752 1358 aa23.98■■□□□ 1.43
SNX6-205ENST00000555648 MAST1Q9Y2H9 1570 aa23.97■■□□□ 1.43
SNX6-205ENST00000555648 MYO3AQ8NEV4 1616 aa23.95■■□□□ 1.42
SNX6-205ENST00000555648 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.42
SNX6-205ENST00000555648 PZPP20742 1482 aa23.94■■□□□ 1.42
SNX6-205ENST00000555648 RRP7BPQ9NSQ0 103 aa23.94■■□□□ 1.42
SNX6-205ENST00000555648 A2ML1A8K2U0 1454 aa23.93■■□□□ 1.42
SNX6-205ENST00000555648 PLA2R1Q13018 1463 aa23.93■■□□□ 1.42
SNX6-205ENST00000555648 FGD6Q6ZV73 1430 aa23.93■■□□□ 1.42
SNX6-205ENST00000555648 KIF15Q9NS87 1388 aa23.92■■□□□ 1.42
SNX6-205ENST00000555648 ABCC5O15440 1437 aa23.91■■□□□ 1.42
SNX6-205ENST00000555648 PTPN23Q9H3S7 1636 aa23.91■■□□□ 1.42
SNX6-205ENST00000555648 DUOX2Q9NRD8 1548 aa23.9■■□□□ 1.42
SNX6-205ENST00000555648 SHANK2Q9UPX8 1470 aa23.89■■□□□ 1.42
SNX6-205ENST00000555648 ZNF142P52746 1687 aaPredicted RBP23.89■■□□□ 1.41
SNX6-205ENST00000555648 DAPK1P53355 1430 aa23.88■■□□□ 1.41
SNX6-205ENST00000555648 FAM50AQ14320 339 aaKnown RBP23.88■■□□□ 1.41
SNX6-205ENST00000555648 THEMISQ8N1K5 641 aaPredicted RBP23.88■■□□□ 1.41
SNX6-205ENST00000555648 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
SNX6-205ENST00000555648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.86■■□□□ 1.415e-9■□□□□ 8.2
SNX6-205ENST00000555648 ANKRD30AQ9BXX3 1397 aa23.86■■□□□ 1.41
SNX6-205ENST00000555648 EIF2AK4Q9P2K8 1649 aaKnown RBP23.85■■□□□ 1.41
SNX6-205ENST00000555648 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
SNX6-205ENST00000555648 ABCC3O15438 1527 aa23.84■■□□□ 1.41
SNX6-205ENST00000555648 NLRP1Q9C000 1473 aa23.84■■□□□ 1.41
SNX6-205ENST00000555648 ANKLE2Q86XL3 938 aa23.84■■□□□ 1.41
SNX6-205ENST00000555648 RNF17Q9BXT8 1623 aaKnown RBP23.84■■□□□ 1.41
SNX6-205ENST00000555648 ERBINQ96RT1 1412 aa23.84■■□□□ 1.41
SNX6-205ENST00000555648 ZNF335Q9H4Z2 1342 aaPredicted RBP23.83■■□□□ 1.4
SNX6-205ENST00000555648 KANK1Q14678 1352 aa23.82■■□□□ 1.4
SNX6-205ENST00000555648 DNMT1P26358 1616 aaKnown RBP23.81■■□□□ 1.4
SNX6-205ENST00000555648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.8■■□□□ 1.4
SNX6-205ENST00000555648 ZC3H13Q5T200 1668 aaKnown RBP23.79■■□□□ 1.4
SNX6-205ENST00000555648 UGGT1Q9NYU2 1555 aa23.78■■□□□ 1.4
SNX6-205ENST00000555648 LTBP4Q8N2S1 1624 aa23.77■■□□□ 1.4
SNX6-205ENST00000555648 ERVK-7P63135 1459 aa23.76■■□□□ 1.39
SNX6-205ENST00000555648 CROCC2H7BZ55 1655 aa23.76■■□□□ 1.39
SNX6-205ENST00000555648 IQSEC2Q5JU85 1478 aa23.75■■□□□ 1.39
SNX6-205ENST00000555648 MROH1Q8NDA8 1641 aa23.73■■□□□ 1.39
SNX6-205ENST00000555648 SPATA31D1Q6ZQQ2 1576 aa23.73■■□□□ 1.39
SNX6-205ENST00000555648 PRDM15P57071 1507 aaPredicted RBP23.71■■□□□ 1.39
SNX6-205ENST00000555648 STAG3Q9UJ98 1225 aa23.71■■□□□ 1.39
SNX6-205ENST00000555648 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
SNX6-205ENST00000555648 UBAP1LF5GYI3 381 aa23.7■■□□□ 1.38
SNX6-205ENST00000555648 NPHP4O75161 1426 aaPredicted RBP23.68■■□□□ 1.38
SNX6-205ENST00000555648 CEP152O94986 1710 aa23.67■■□□□ 1.38
SNX6-205ENST00000555648 ADGRL2O95490 1459 aa23.66■■□□□ 1.38
SNX6-205ENST00000555648 EID1Q9Y6B2 187 aa23.65■■□□□ 1.38
SNX6-205ENST00000555648 ANKRD50Q9ULJ7 1429 aa23.65■■□□□ 1.38
SNX6-205ENST00000555648 POLR1AO95602 1720 aaPredicted RBP23.63■■□□□ 1.37
SNX6-205ENST00000555648 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
SNX6-205ENST00000555648 NEURL4Q96JN8 1562 aa23.63■■□□□ 1.37
SNX6-205ENST00000555648 TXNDC2Q86VQ3 553 aa23.62■■□□□ 1.37
SNX6-205ENST00000555648 MED14O60244 1454 aa23.62■■□□□ 1.37
SNX6-205ENST00000555648 ITGAEP38570 1179 aa23.61■■□□□ 1.37
SNX6-205ENST00000555648 CPS1P31327 1500 aa23.6■■□□□ 1.37
SNX6-205ENST00000555648 DEPDC5O75140 1603 aa23.6■■□□□ 1.37
SNX6-205ENST00000555648 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
SNX6-205ENST00000555648 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
SNX6-205ENST00000555648 TOM1O60784 492 aa23.58■■□□□ 1.37
SNX6-205ENST00000555648 SCAF11Q99590 1463 aaKnown RBP23.57■■□□□ 1.36
SNX6-205ENST00000555648 IDI1Q13907 227 aa23.56■■□□□ 1.36
SNX6-205ENST00000555648 CFAP65Q6ZU64 1925 aaKnown RBP23.55■■□□□ 1.36
SNX6-205ENST00000555648 LTKP29376 864 aa23.55■■□□□ 1.36
SNX6-205ENST00000555648 SLC52A1Q9NWF4 448 aa23.55■■□□□ 1.36
SNX6-205ENST00000555648 VWDEQ8N2E2 1590 aa23.54■■□□□ 1.36
SNX6-205ENST00000555648 ROCK1Q13464 1354 aa23.53■■□□□ 1.36
SNX6-205ENST00000555648 PIP4K2BP78356 416 aa23.53■■□□□ 1.36
SNX6-205ENST00000555648 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
SNX6-205ENST00000555648 IQGAP1P46940 1657 aa23.52■■□□□ 1.36
SNX6-205ENST00000555648 UBR1Q8IWV7 1749 aa23.51■■□□□ 1.35
SNX6-205ENST00000555648 EFCAB6Q5THR3 1501 aa23.51■■□□□ 1.35
SNX6-205ENST00000555648 DISP3Q9P2K9 1392 aa23.51■■□□□ 1.35
SNX6-205ENST00000555648 ARHGAP23Q9P227 1491 aa23.5■■□□□ 1.35
SNX6-205ENST00000555648 SLIT1O75093 1534 aa23.5■■□□□ 1.35
SNX6-205ENST00000555648 NOS1P29475 1434 aa23.5■■□□□ 1.35
SNX6-205ENST00000555648 BCANQ96GW7 911 aa23.49■■□□□ 1.35
SNX6-205ENST00000555648 RPRD2Q5VT52 1461 aaKnown RBP23.49■■□□□ 1.35
SNX6-205ENST00000555648 PIK3C2BO00750 1634 aa23.47■■□□□ 1.35
SNX6-205ENST00000555648 HDGFP51858 240 aaKnown RBP23.46■■□□□ 1.35
SNX6-205ENST00000555648 CHGAP10645 457 aaKnown RBP23.44■■□□□ 1.34
SNX6-205ENST00000555648 NUP155O75694 1391 aa23.43■■□□□ 1.34
SNX6-205ENST00000555648 PPP1R15AO75807 674 aaPredicted RBP23.43■■□□□ 1.34
SNX6-205ENST00000555648 SYNMO15061 1565 aa23.43■■□□□ 1.34
SNX6-205ENST00000555648 ADGRB3O60242 1522 aa23.39■■□□□ 1.34
SNX6-205ENST00000555648 LRRC7Q96NW7 1537 aa23.39■■□□□ 1.34
SNX6-205ENST00000555648 SLC26A8Q96RN1 970 aa23.39■■□□□ 1.33
SNX6-205ENST00000555648 TET3O43151 1660 aa23.38■■□□□ 1.33
SNX6-205ENST00000555648 HSPA1LP34931 641 aa23.38■■□□□ 1.33
SNX6-205ENST00000555648 UNC13BO14795 1591 aa23.38■■□□□ 1.33
SNX6-205ENST00000555648 KDM5AP29375 1690 aaKnown RBP23.37■■□□□ 1.33
SNX6-205ENST00000555648 KCNA6P17658 529 aa23.35■■□□□ 1.33
SNX6-205ENST00000555648 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.35■■□□□ 1.33
SNX6-205ENST00000555648 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
SNX6-205ENST00000555648 RRBP1Q9P2E9 1410 aaKnown RBP23.33■■□□□ 1.32
SNX6-205ENST00000555648 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms