RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
ABCD4-222ENST00000555617 CDC42BPBQ9Y5S2 1711 aa20.22■□□□□ 0.83
ABCD4-222ENST00000555617 EP400Q96L91 3159 aa20.2■□□□□ 0.82
ABCD4-222ENST00000555617 PLXNC1O60486 1568 aa20.18■□□□□ 0.82
ABCD4-222ENST00000555617 FBXO31Q5XUX0 539 aaPredicted RBP20.18■□□□□ 0.82
ABCD4-222ENST00000555617 TNRQ92752 1358 aa20.16■□□□□ 0.82
ABCD4-222ENST00000555617 MEX3CQ5U5Q3 659 aaKnown RBP20.15■□□□□ 0.82
ABCD4-222ENST00000555617 MAP3K1Q13233 1512 aa20.15■□□□□ 0.82
ABCD4-222ENST00000555617 NUTM2BA6NNL0 878 aaPredicted RBP20.14■□□□□ 0.81
ABCD4-222ENST00000555617 NUTM2EB1AL46 878 aaPredicted RBP20.14■□□□□ 0.81
ABCD4-222ENST00000555617 NUTM2DQ5VT03 806 aaPredicted RBP20.14■□□□□ 0.81
ABCD4-222ENST00000555617 NUTM2AQ8IVF1 878 aaPredicted RBP20.14■□□□□ 0.81
ABCD4-222ENST00000555617 UGGT1Q9NYU2 1555 aa20.13■□□□□ 0.81
ABCD4-222ENST00000555617 PRXQ9BXM0 1461 aa20.13■□□□□ 0.81
ABCD4-222ENST00000555617 SAMD9LQ8IVG5 1584 aa20.12■□□□□ 0.81
ABCD4-222ENST00000555617 SHPRHQ149N8 1683 aa20.1■□□□□ 0.81
ABCD4-222ENST00000555617 GGT6Q6P531 493 aa20.09■□□□□ 0.81
ABCD4-222ENST00000555617 SPATA31A6Q5VVP1 1343 aa20.07■□□□□ 0.8
ABCD4-222ENST00000555617 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
ABCD4-222ENST00000555617 FAM135AQ9P2D6 1515 aa20.07■□□□□ 0.8
ABCD4-222ENST00000555617 YY1P25490 414 aa20.06■□□□□ 0.8
ABCD4-222ENST00000555617 THEMISQ8N1K5 641 aaPredicted RBP20.06■□□□□ 0.8
ABCD4-222ENST00000555617 ATP7AQ04656 1500 aa20.06■□□□□ 0.8
ABCD4-222ENST00000555617 TMEM94Q12767 1356 aa20.06■□□□□ 0.8
ABCD4-222ENST00000555617 ATAD2Q6PL18 1390 aa20.06■□□□□ 0.8
ABCD4-222ENST00000555617 AFF2P51816 1311 aa20.05■□□□□ 0.8
ABCD4-222ENST00000555617 LRRC9Q6ZRR7 1453 aa20.05■□□□□ 0.8
ABCD4-222ENST00000555617 PREX2Q70Z35 1606 aa20.03■□□□□ 0.8
ABCD4-222ENST00000555617 FGD6Q6ZV73 1430 aa20.02■□□□□ 0.79
ABCD4-222ENST00000555617 A2MP01023 1474 aa20.01■□□□□ 0.79
ABCD4-222ENST00000555617 PZPP20742 1482 aa20.01■□□□□ 0.79
ABCD4-222ENST00000555617 FOXD1Q16676 465 aa20■□□□□ 0.79
ABCD4-222ENST00000555617 NLRP1Q9C000 1473 aa19.99■□□□□ 0.79
ABCD4-222ENST00000555617 NHSL1Q5SYE7 1610 aa19.98■□□□□ 0.79
ABCD4-222ENST00000555617 INO80Q9ULG1 1556 aaPredicted RBP19.98■□□□□ 0.79
ABCD4-222ENST00000555617 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
ABCD4-222ENST00000555617 RBM6P78332 1123 aaKnown RBP19.97■□□□□ 0.79
ABCD4-222ENST00000555617 DIP2AQ14689 1571 aa19.96■□□□□ 0.79
ABCD4-222ENST00000555617 MIA2Q96PC5 1412 aa19.96■□□□□ 0.79
ABCD4-222ENST00000555617 TIAM1Q13009 1591 aa19.95■□□□□ 0.78
ABCD4-222ENST00000555617 QTRT2Q9H974 415 aaKnown RBP19.93■□□□□ 0.78
ABCD4-222ENST00000555617 SENP3-EIF4A1A0A087X0R7 540 aa19.92■□□□□ 0.78
ABCD4-222ENST00000555617 SCAF11Q99590 1463 aaKnown RBP19.92■□□□□ 0.78
ABCD4-222ENST00000555617 SYCP2Q9BX26 1530 aa19.92■□□□□ 0.78
ABCD4-222ENST00000555617 ADGBQ8N7X0 1667 aa19.91■□□□□ 0.78
ABCD4-222ENST00000555617 SLAIN2Q9P270 581 aa19.9■□□□□ 0.78
ABCD4-222ENST00000555617 AHDC1Q5TGY3 1603 aaPredicted RBP19.9■□□□□ 0.78
ABCD4-222ENST00000555617 UBR1Q8IWV7 1749 aa19.9■□□□□ 0.78
ABCD4-222ENST00000555617 LTKP29376 864 aa19.89■□□□□ 0.77
ABCD4-222ENST00000555617 TROQ12816 1431 aaPredicted RBP19.89■□□□□ 0.77
ABCD4-222ENST00000555617 NWD1Q149M9 1564 aa19.89■□□□□ 0.77
ABCD4-222ENST00000555617 CDC42BPAQ5VT25 1732 aa19.89■□□□□ 0.77
ABCD4-222ENST00000555617 BCL9LQ86UU0 1499 aa19.89■□□□□ 0.77
ABCD4-222ENST00000555617 SPAG9O60271 1321 aaKnown RBP19.88■□□□□ 0.77
ABCD4-222ENST00000555617 LRRIQ1Q96JM4 1722 aa19.87■□□□□ 0.77
ABCD4-222ENST00000555617 PSDA5PKW4 1024 aaPredicted RBP19.85■□□□□ 0.77
ABCD4-222ENST00000555617 PRDM15P57071 1507 aaPredicted RBP19.85■□□□□ 0.77
ABCD4-222ENST00000555617 KDM5AP29375 1690 aaKnown RBP19.84■□□□□ 0.77
ABCD4-222ENST00000555617 HRCP23327 699 aa19.83■□□□□ 0.77
ABCD4-222ENST00000555617 DEFB132Q7Z7B7 95 aa19.83■□□□□ 0.77
ABCD4-222ENST00000555617 NCOA2Q15596 1464 aa19.83■□□□□ 0.76
ABCD4-222ENST00000555617 ARHGAP23Q9P227 1491 aa19.81■□□□□ 0.76
ABCD4-222ENST00000555617 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
ABCD4-222ENST00000555617 C8orf37Q96NL8 207 aa19.81■□□□□ 0.76
ABCD4-222ENST00000555617 MAST1Q9Y2H9 1570 aa19.78■□□□□ 0.76
ABCD4-222ENST00000555617 CEP350Q5VT06 3117 aa19.78■□□□□ 0.76
ABCD4-222ENST00000555617 HNRNPMP52272 730 aaKnown RBP eCLIP19.78■□□□□ 0.76
ABCD4-222ENST00000555617 CCDC125Q86Z20 511 aa19.78■□□□□ 0.76
ABCD4-222ENST00000555617 MSH6P52701 1360 aa19.78■□□□□ 0.76
ABCD4-222ENST00000555617 SLIT1O75093 1534 aa19.77■□□□□ 0.76
ABCD4-222ENST00000555617 KCNA6P17658 529 aa19.75■□□□□ 0.75
ABCD4-222ENST00000555617 TXNDC2Q86VQ3 553 aa19.73■□□□□ 0.75
ABCD4-222ENST00000555617 CLIP1P30622 1438 aa19.73■□□□□ 0.75
ABCD4-222ENST00000555617 ABCC3O15438 1527 aa19.72■□□□□ 0.75
ABCD4-222ENST00000555617 NGLY1Q96IV0 654 aa19.72■□□□□ 0.75
ABCD4-222ENST00000555617 NKTRP30414 1462 aaKnown RBP19.72■□□□□ 0.75
ABCD4-222ENST00000555617 BLMP54132 1417 aaPredicted RBP19.7■□□□□ 0.74
ABCD4-222ENST00000555617 ZNF777Q9ULD5 760 aaPredicted RBP19.7■□□□□ 0.74
ABCD4-222ENST00000555617 ATP1B4Q9UN42 357 aaPredicted RBP19.7■□□□□ 0.74
ABCD4-222ENST00000555617 CFAP65Q6ZU64 1925 aaKnown RBP19.7■□□□□ 0.74
ABCD4-222ENST00000555617 ERVK-7P63135 1459 aa19.68■□□□□ 0.74
ABCD4-222ENST00000555617 TET3O43151 1660 aa19.68■□□□□ 0.74
ABCD4-222ENST00000555617 CDK11AQ9UQ88 783 aaPredicted RBP19.66■□□□□ 0.74
ABCD4-222ENST00000555617 ZNF784Q8NCA9 323 aaPredicted RBP19.65■□□□□ 0.74
ABCD4-222ENST00000555617 WASHC2CQ9Y4E1 1318 aa19.65■□□□□ 0.74
ABCD4-222ENST00000555617 C1QTNF8P60827 252 aa19.64■□□□□ 0.73
ABCD4-222ENST00000555617 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
ABCD4-222ENST00000555617 SLC26A8Q96RN1 970 aa19.64■□□□□ 0.73
ABCD4-222ENST00000555617 ATRNO75882 1429 aa19.64■□□□□ 0.73
ABCD4-222ENST00000555617 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.64■□□□□ 0.73
ABCD4-222ENST00000555617 KIF3BO15066 747 aa19.63■□□□□ 0.73
ABCD4-222ENST00000555617 BRWD3Q6RI45 1802 aa19.62■□□□□ 0.73
ABCD4-222ENST00000555617 CAMTA1Q9Y6Y1 1673 aa19.62■□□□□ 0.73
ABCD4-222ENST00000555617 SETD5Q9C0A6 1442 aa19.62■□□□□ 0.73
ABCD4-222ENST00000555617 DHX29Q7Z478 1369 aaKnown RBP19.61■□□□□ 0.73
ABCD4-222ENST00000555617 GPATCH8Q9UKJ3 1502 aaKnown RBP19.61■□□□□ 0.73
ABCD4-222ENST00000555617 PNPLA6Q8IY17 1366 aa19.59■□□□□ 0.73
ABCD4-222ENST00000555617 ADAMTS2O95450 1211 aa19.59■□□□□ 0.73
ABCD4-222ENST00000555617 BRINP3Q76B58 766 aa19.59■□□□□ 0.73
ABCD4-222ENST00000555617 USP21Q9UK80 565 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms