RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 NECTIN2Q92692 538 aa11.85□□□□□ -0.51
PAX3-210ENST00000555548 CCDC9Q9Y3X0 531 aaKnown RBP11.85□□□□□ -0.51
PAX3-210ENST00000555548 SSTR3P32745 418 aaPredicted RBP11.84□□□□□ -0.51
PAX3-210ENST00000555548 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
PAX3-210ENST00000555548 ZNF777Q9ULD5 760 aaPredicted RBP11.84□□□□□ -0.51
PAX3-210ENST00000555548 L3MBTL3Q96JM7 780 aaPredicted RBP11.83□□□□□ -0.52
PAX3-210ENST00000555548 ANO8Q9HCE9 1232 aaPredicted RBP11.83□□□□□ -0.52
PAX3-210ENST00000555548 RAD21O60216 631 aa11.82□□□□□ -0.52
PAX3-210ENST00000555548 EN1Q05925 392 aaPredicted RBP11.82□□□□□ -0.52
PAX3-210ENST00000555548 PHOX2BQ99453 314 aa11.82□□□□□ -0.52
PAX3-210ENST00000555548 CDHR5Q9HBB8 845 aa11.82□□□□□ -0.52
PAX3-210ENST00000555548 SERPINA10Q9UK55 444 aa11.82□□□□□ -0.52
PAX3-210ENST00000555548 PROCA1Q8NCQ7 364 aaPredicted RBP11.81□□□□□ -0.52
PAX3-210ENST00000555548 PTCD2Q8WV60 388 aaKnown RBP11.81□□□□□ -0.52
PAX3-210ENST00000555548 POM121Q96HA1 1249 aa11.81□□□□□ -0.52
PAX3-210ENST00000555548 EPAS1Q99814 870 aa11.8□□□□□ -0.52
PAX3-210ENST00000555548 BEGAINQ9BUH8 593 aa11.8□□□□□ -0.52
PAX3-210ENST00000555548 CCDC97Q96F63 343 aaPredicted RBP11.79□□□□□ -0.52
PAX3-210ENST00000555548 TRAIPQ9BWF2 469 aa11.79□□□□□ -0.52
PAX3-210ENST00000555548 ATMINO43313 823 aaPredicted RBP11.78□□□□□ -0.52
PAX3-210ENST00000555548 PHF14O94880 888 aa11.78□□□□□ -0.52
PAX3-210ENST00000555548 PLCG2P16885 1265 aa11.78□□□□□ -0.52
PAX3-210ENST00000555548 CLCN6P51797 869 aa11.78□□□□□ -0.52
PAX3-210ENST00000555548 FAM217BQ9NTX9 383 aaPredicted RBP11.78□□□□□ -0.52
PAX3-210ENST00000555548 SPDYE5A6NIY4 337 aa11.77□□□□□ -0.53
PAX3-210ENST00000555548 MAP3K7O43318 606 aa11.76□□□□□ -0.53
PAX3-210ENST00000555548 ASTLQ6HA08 431 aaPredicted RBP11.76□□□□□ -0.53
PAX3-210ENST00000555548 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.76□□□□□ -0.53
PAX3-210ENST00000555548 POLR3EQ9NVU0 708 aa11.75□□□□□ -0.53
PAX3-210ENST00000555548 MYSM1Q5VVJ2 828 aa11.74□□□□□ -0.53
PAX3-210ENST00000555548 COG6Q9Y2V7 657 aa11.74□□□□□ -0.53
PAX3-210ENST00000555548 SLC34A2O95436 690 aa11.73□□□□□ -0.53
PAX3-210ENST00000555548 BANK1Q8NDB2 785 aa11.73□□□□□ -0.53
PAX3-210ENST00000555548 ATP1B4Q9UN42 357 aaPredicted RBP11.73□□□□□ -0.53
PAX3-210ENST00000555548 OATP04181 439 aa11.72□□□□□ -0.53
PAX3-210ENST00000555548 METTL3Q86U44 580 aaKnown RBP11.72□□□□□ -0.53
PAX3-210ENST00000555548 KCTD17Q8N5Z5 321 aa11.72□□□□□ -0.53
PAX3-210ENST00000555548 PLSCR2Q9NRY7 297 aa11.72□□□□□ -0.53
PAX3-210ENST00000555548 SLAIN1Q8ND83 568 aa11.7□□□□□ -0.54
PAX3-210ENST00000555548 RBM33Q96EV2 1170 aaKnown RBP11.7□□□□□ -0.54
PAX3-210ENST00000555548 PCDHGA10Q9Y5H3 936 aa11.7□□□□□ -0.54
PAX3-210ENST00000555548 CLK2P49760 499 aaKnown RBP11.69□□□□□ -0.54
PAX3-210ENST00000555548 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
PAX3-210ENST00000555548 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
PAX3-210ENST00000555548 SNRKQ9NRH2 765 aa11.68□□□□□ -0.54
PAX3-210ENST00000555548 RFC5P40937 340 aa11.67□□□□□ -0.54
PAX3-210ENST00000555548 PXYLP1Q8TE99 480 aa11.67□□□□□ -0.54
PAX3-210ENST00000555548 DIXDC1Q155Q3 683 aa11.66□□□□□ -0.54
PAX3-210ENST00000555548 FAM161AQ3B820 660 aa11.66□□□□□ -0.54
PAX3-210ENST00000555548 TBC1D2Q9BYX2 928 aa11.66□□□□□ -0.54
PAX3-210ENST00000555548 ZNF330Q9Y3S2 320 aaPredicted RBP11.66□□□□□ -0.54
PAX3-210ENST00000555548 ADGRG1Q9Y653 693 aa11.66□□□□□ -0.54
PAX3-210ENST00000555548 TMEM259Q4ZIN3 620 aa11.65□□□□□ -0.54
PAX3-210ENST00000555548 NLRP7Q8WX94 980 aa11.65□□□□□ -0.54
PAX3-210ENST00000555548 FBXW7Q969H0 707 aa11.65□□□□□ -0.54
PAX3-210ENST00000555548 CERKQ8TCT0 537 aa11.64□□□□□ -0.55
PAX3-210ENST00000555548 PPP2R2DQ66LE6 453 aa11.63□□□□□ -0.55
PAX3-210ENST00000555548 PADI6Q6TGC4 694 aa11.62□□□□□ -0.55
PAX3-210ENST00000555548 TTC13Q8NBP0 860 aa11.61□□□□□ -0.55
PAX3-210ENST00000555548 RETREG2Q8NC44 543 aa11.61□□□□□ -0.55
PAX3-210ENST00000555548 COLQQ9Y215 455 aaPredicted RBP11.61□□□□□ -0.55
PAX3-210ENST00000555548 FBXO31Q5XUX0 539 aaPredicted RBP11.6□□□□□ -0.55
PAX3-210ENST00000555548 JPH4Q96JJ6 628 aa11.6□□□□□ -0.55
PAX3-210ENST00000555548 RBM27Q9P2N5 1060 aaKnown RBP11.6□□□□□ -0.55
PAX3-210ENST00000555548 SEC24BO95487 1268 aa11.59□□□□□ -0.55
PAX3-210ENST00000555548 AEBP1Q8IUX7 1158 aa11.59□□□□□ -0.55
PAX3-210ENST00000555548 LIMD1Q9UGP4 676 aa11.59□□□□□ -0.55
PAX3-210ENST00000555548 PPP1R15AO75807 674 aaPredicted RBP11.58□□□□□ -0.56
PAX3-210ENST00000555548 TUSC1Q2TAM9 212 aa11.58□□□□□ -0.56
PAX3-210ENST00000555548 MTMR14Q8NCE2 650 aa11.58□□□□□ -0.56
PAX3-210ENST00000555548 SOCS7O14512 581 aa11.57□□□□□ -0.56
PAX3-210ENST00000555548 C6orf132Q5T0Z8 1188 aa11.56□□□□□ -0.56
PAX3-210ENST00000555548 RIC3Q7Z5B4 369 aa11.56□□□□□ -0.56
PAX3-210ENST00000555548 WWC1Q8IX03 1113 aa11.56□□□□□ -0.56
PAX3-210ENST00000555548 GDPD2Q9HCC8 539 aa11.56□□□□□ -0.56
PAX3-210ENST00000555548 PCDHGA4Q9Y5G9 962 aa11.56□□□□□ -0.56
PAX3-210ENST00000555548 KDM4FA0A1W2PPD8 638 aa11.55□□□□□ -0.56
PAX3-210ENST00000555548 FOSBP53539 338 aa11.55□□□□□ -0.56
PAX3-210ENST00000555548 C3orf67Q6ZVT6 689 aa11.54□□□□□ -0.56
PAX3-210ENST00000555548 SPIRE2Q8WWL2 714 aa11.54□□□□□ -0.56
PAX3-210ENST00000555548 SPTLC1O15269 473 aa11.53□□□□□ -0.56
PAX3-210ENST00000555548 IRF5Q13568 498 aa11.53□□□□□ -0.56
PAX3-210ENST00000555548 RBM46Q8TBY0 533 aaKnown RBP11.53□□□□□ -0.56
PAX3-210ENST00000555548 EVX2Q03828 476 aa11.52□□□□□ -0.57
PAX3-210ENST00000555548 PELP1Q8IZL8 1130 aaKnown RBP11.51□□□□□ -0.57
PAX3-210ENST00000555548 CALR3Q96L12 384 aaKnown RBP11.51□□□□□ -0.57
PAX3-210ENST00000555548 PRM3Q9NNZ6 103 aa11.51□□□□□ -0.57
PAX3-210ENST00000555548 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.5□□□□□ -0.57
PAX3-210ENST00000555548 HAX1O00165 279 aa11.5□□□□□ -0.57
PAX3-210ENST00000555548 PRSS12P56730 875 aa11.5□□□□□ -0.57
PAX3-210ENST00000555548 PDE4CQ08493 712 aa11.5□□□□□ -0.57
PAX3-210ENST00000555548 RSBN1LQ6PCB5 846 aaPredicted RBP11.49□□□□□ -0.57
PAX3-210ENST00000555548 ZDHHC16Q969W1 377 aa11.49□□□□□ -0.57
PAX3-210ENST00000555548 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
PAX3-210ENST00000555548 POTEFA5A3E0 1075 aa11.48□□□□□ -0.57
PAX3-210ENST00000555548 CD46P15529 392 aa11.48□□□□□ -0.57
PAX3-210ENST00000555548 GJA5P36382 358 aa11.48□□□□□ -0.57
PAX3-210ENST00000555548 ABL2P42684 1182 aa11.48□□□□□ -0.57
PAX3-210ENST00000555548 TMCO4Q5TGY1 634 aa11.48□□□□□ -0.57
PAX3-210ENST00000555548 RGS22Q8NE09 1264 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms