RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CROCC2H7BZ55 1655 aa38.04■■■■□ 3.68
PRKCH-216ENST00000555542 EIF2AK4Q9P2K8 1649 aaKnown RBP38■■■■□ 3.67
PRKCH-216ENST00000555542 SHANK2Q9UPX8 1470 aa37.99■■■■□ 3.67
PRKCH-216ENST00000555542 ZNF142P52746 1687 aaPredicted RBP37.98■■■■□ 3.67
PRKCH-216ENST00000555542 CAMSAP1Q5T5Y3 1602 aa37.98■■■■□ 3.67
PRKCH-216ENST00000555542 ABCC5O15440 1437 aa37.98■■■■□ 3.67
PRKCH-216ENST00000555542 FBXO41Q8TF61 875 aa37.98■■■■□ 3.67
PRKCH-216ENST00000555542 RNF17Q9BXT8 1623 aaKnown RBP37.98■■■■□ 3.67
PRKCH-216ENST00000555542 TCOF1Q13428 1488 aaKnown RBP37.97■■■■□ 3.67
PRKCH-216ENST00000555542 DNMT1P26358 1616 aaKnown RBP37.97■■■■□ 3.67
PRKCH-216ENST00000555542 CEP170BQ9Y4F5 1589 aaPredicted RBP37.97■■■■□ 3.67
PRKCH-216ENST00000555542 DUOX2Q9NRD8 1548 aa37.97■■■■□ 3.67
PRKCH-216ENST00000555542 DAPK1P53355 1430 aa37.96■■■■□ 3.67
PRKCH-216ENST00000555542 NCOA1Q15788 1441 aa37.95■■■■□ 3.67
PRKCH-216ENST00000555542 PZPP20742 1482 aa37.94■■■■□ 3.66
PRKCH-216ENST00000555542 KIF15Q9NS87 1388 aa37.93■■■■□ 3.66
PRKCH-216ENST00000555542 RRP7BPQ9NSQ0 103 aa37.91■■■■□ 3.66
PRKCH-216ENST00000555542 PTPRTO14522 1441 aa37.9■■■■□ 3.66
PRKCH-216ENST00000555542 FBXO31Q5XUX0 539 aaPredicted RBP37.9■■■■□ 3.66
PRKCH-216ENST00000555542 ZC3H13Q5T200 1668 aaKnown RBP37.9■■■■□ 3.66
PRKCH-216ENST00000555542 TNRQ92752 1358 aa37.89■■■■□ 3.66
PRKCH-216ENST00000555542 CERKQ8TCT0 537 aa37.87■■■■□ 3.65
PRKCH-216ENST00000555542 FAM50AQ14320 339 aaKnown RBP37.86■■■■□ 3.65
PRKCH-216ENST00000555542 A2ML1A8K2U0 1454 aa37.85■■■■□ 3.65
PRKCH-216ENST00000555542 ABCC3O15438 1527 aa37.85■■■■□ 3.65
PRKCH-216ENST00000555542 CHIC2Q9UKJ5 165 aa37.84■■■■□ 3.65
PRKCH-216ENST00000555542 ERBINQ96RT1 1412 aa37.84■■■■□ 3.65
PRKCH-216ENST00000555542 MROH1Q8NDA8 1641 aa37.82■■■■□ 3.64
PRKCH-216ENST00000555542 NCKAP5LQ9HCH0 1330 aa37.82■■■■□ 3.64
PRKCH-216ENST00000555542 ANKRD30AQ9BXX3 1397 aa37.81■■■■□ 3.64
PRKCH-216ENST00000555542 PLA2R1Q13018 1463 aa37.81■■■■□ 3.64
PRKCH-216ENST00000555542 CEP152O94986 1710 aa37.81■■■■□ 3.64
PRKCH-216ENST00000555542 PKD2Q13563 968 aa37.77■■■■□ 3.64
PRKCH-216ENST00000555542 PRDM15P57071 1507 aaPredicted RBP37.73■■■■□ 3.63
PRKCH-216ENST00000555542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.73■■■■□ 3.63
PRKCH-216ENST00000555542 NLRP1Q9C000 1473 aa37.71■■■■□ 3.63
PRKCH-216ENST00000555542 SPATA31D1Q6ZQQ2 1576 aa37.68■■■■□ 3.62
PRKCH-216ENST00000555542 KANK1Q14678 1352 aa37.68■■■■□ 3.62
PRKCH-216ENST00000555542 CFAP65Q6ZU64 1925 aaKnown RBP37.67■■■■□ 3.62
PRKCH-216ENST00000555542 ERVK-7P63135 1459 aa37.66■■■■□ 3.62
PRKCH-216ENST00000555542 DEPDC5O75140 1603 aa37.66■■■■□ 3.62
PRKCH-216ENST00000555542 UGGT1Q9NYU2 1555 aa37.65■■■■□ 3.62
PRKCH-216ENST00000555542 ADGRL2O95490 1459 aa37.64■■■■□ 3.62
PRKCH-216ENST00000555542 POLR1AO95602 1720 aaPredicted RBP37.64■■■■□ 3.62
PRKCH-216ENST00000555542 PPARGC1BQ86YN6 1023 aaKnown RBP37.63■■■■□ 3.61
PRKCH-216ENST00000555542 THEMISQ8N1K5 641 aaPredicted RBP37.62■■■■□ 3.61
PRKCH-216ENST00000555542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.6■■■■□ 3.61
PRKCH-216ENST00000555542 LTBP4Q8N2S1 1624 aa37.6■■■■□ 3.61
PRKCH-216ENST00000555542 ARHGAP31Q2M1Z3 1444 aa37.55■■■■□ 3.6
PRKCH-216ENST00000555542 ANKLE2Q86XL3 938 aa37.55■■■■□ 3.6
PRKCH-216ENST00000555542 ZNF335Q9H4Z2 1342 aaPredicted RBP37.55■■■■□ 3.6
PRKCH-216ENST00000555542 ANKRD50Q9ULJ7 1429 aa37.52■■■■□ 3.6
PRKCH-216ENST00000555542 NEURL4Q96JN8 1562 aa37.51■■■■□ 3.59
PRKCH-216ENST00000555542 VWDEQ8N2E2 1590 aa37.47■■■■□ 3.59
PRKCH-216ENST00000555542 LMTK2Q8IWU2 1503 aa37.47■■■■□ 3.59
PRKCH-216ENST00000555542 ITGAEP38570 1179 aa37.46■■■■□ 3.59
PRKCH-216ENST00000555542 UBR1Q8IWV7 1749 aa37.44■■■■□ 3.58
PRKCH-216ENST00000555542 IQSEC2Q5JU85 1478 aa37.44■■■■□ 3.58
PRKCH-216ENST00000555542 NPHP4O75161 1426 aaPredicted RBP37.41■■■■□ 3.58
PRKCH-216ENST00000555542 EFCAB6Q5THR3 1501 aa37.4■■■■□ 3.58
PRKCH-216ENST00000555542 ROCK1Q13464 1354 aa37.39■■■■□ 3.58
PRKCH-216ENST00000555542 STAG3Q9UJ98 1225 aa37.37■■■■□ 3.57
PRKCH-216ENST00000555542 IQGAP1P46940 1657 aa37.37■■■■□ 3.57
PRKCH-216ENST00000555542 MED14O60244 1454 aa37.36■■■■□ 3.57
PRKCH-216ENST00000555542 PIK3C2BO00750 1634 aa37.35■■■■□ 3.57
PRKCH-216ENST00000555542 UNC13BO14795 1591 aa37.3■■■■□ 3.56
PRKCH-216ENST00000555542 TET3O43151 1660 aa37.29■■■■□ 3.56
PRKCH-216ENST00000555542 SCAF11Q99590 1463 aaKnown RBP37.29■■■■□ 3.56
PRKCH-216ENST00000555542 SYNMO15061 1565 aa37.29■■■■□ 3.56
PRKCH-216ENST00000555542 CPS1P31327 1500 aa37.27■■■■□ 3.56
PRKCH-216ENST00000555542 TXNDC2Q86VQ3 553 aa37.26■■■■□ 3.56
PRKCH-216ENST00000555542 EID1Q9Y6B2 187 aa37.26■■■■□ 3.56
PRKCH-216ENST00000555542 NOS1P29475 1434 aa37.26■■■■□ 3.55
PRKCH-216ENST00000555542 RPRD2Q5VT52 1461 aaKnown RBP37.26■■■■□ 3.55
PRKCH-216ENST00000555542 SLIT1O75093 1534 aa37.26■■■■□ 3.55
PRKCH-216ENST00000555542 IDI1Q13907 227 aa37.25■■■■□ 3.55
PRKCH-216ENST00000555542 GCC2Q8IWJ2 1684 aa37.25■■■■□ 3.55
PRKCH-216ENST00000555542 ARHGAP23Q9P227 1491 aa37.24■■■■□ 3.55
PRKCH-216ENST00000555542 UBAP1LF5GYI3 381 aa37.23■■■■□ 3.55
PRKCH-216ENST00000555542 KDM5AP29375 1690 aaKnown RBP37.22■■■■□ 3.55
PRKCH-216ENST00000555542 RRBP1Q9P2E9 1410 aaKnown RBP37.19■■■■□ 3.54
PRKCH-216ENST00000555542 TMEM2Q9UHN6 1383 aa37.19■■■■□ 3.54
PRKCH-216ENST00000555542 LTKP29376 864 aa37.19■■■■□ 3.54
PRKCH-216ENST00000555542 SLC52A1Q9NWF4 448 aa37.18■■■■□ 3.54
PRKCH-216ENST00000555542 ADGRB3O60242 1522 aa37.17■■■■□ 3.54
PRKCH-216ENST00000555542 IQGAP3Q86VI3 1631 aa37.16■■■■□ 3.54
PRKCH-216ENST00000555542 NUP155O75694 1391 aa37.15■■■■□ 3.54
PRKCH-216ENST00000555542 E9PCH4 1651 aa37.12■■■■□ 3.53
PRKCH-216ENST00000555542 STRCP1A6NGW2 1772 aa37.07■■■■□ 3.53
PRKCH-216ENST00000555542 SCAF1Q9H7N4 1312 aaKnown RBP37.05■■■■□ 3.52
PRKCH-216ENST00000555542 TOM1O60784 492 aa37.03■■■■□ 3.52
PRKCH-216ENST00000555542 MYO5BQ9ULV0 1848 aa37.03■■■■□ 3.52
PRKCH-216ENST00000555542 CHGAP10645 457 aaKnown RBP37.02■■■■□ 3.52
PRKCH-216ENST00000555542 BCANQ96GW7 911 aa37.01■■■■□ 3.52
PRKCH-216ENST00000555542 PIP4K2BP78356 416 aa36.99■■■■□ 3.51
PRKCH-216ENST00000555542 LRRC7Q96NW7 1537 aa36.98■■■■□ 3.51
PRKCH-216ENST00000555542 TMEM131LA2VDJ0 1609 aa36.97■■■■□ 3.51
PRKCH-216ENST00000555542 PPP1R15AO75807 674 aaPredicted RBP36.96■■■■□ 3.51
PRKCH-216ENST00000555542 HDGFP51858 240 aaKnown RBP36.94■■■■□ 3.5
PRKCH-216ENST00000555542 NAIPQ13075 1403 aa36.93■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms