RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 FBXO31Q5XUX0 539 aaPredicted RBP21.09■□□□□ 0.97
XRCC3-212ENST00000555231 CCDC141Q6ZP82 1450 aa21.07■□□□□ 0.96
XRCC3-212ENST00000555231 POLR1AO95602 1720 aaPredicted RBP21.07■□□□□ 0.96
XRCC3-212ENST00000555231 CAMSAP2Q08AD1 1489 aa21.07■□□□□ 0.96
XRCC3-212ENST00000555231 NCOA2Q15596 1464 aa21.07■□□□□ 0.96
XRCC3-212ENST00000555231 TNRQ92752 1358 aa21.06■□□□□ 0.96
XRCC3-212ENST00000555231 KDM5DQ9BY66 1539 aa21.04■□□□□ 0.96
XRCC3-212ENST00000555231 NEURL4Q96JN8 1562 aa21.04■□□□□ 0.96
XRCC3-212ENST00000555231 PZPP20742 1482 aa21.02■□□□□ 0.96
XRCC3-212ENST00000555231 WASHC2CQ9Y4E1 1318 aa21.02■□□□□ 0.95
XRCC3-212ENST00000555231 SCAF1Q9H7N4 1312 aaKnown RBP21■□□□□ 0.95
XRCC3-212ENST00000555231 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.98■□□□□ 0.953e-6■■■■□ 21.3
XRCC3-212ENST00000555231 RSPH4AQ5TD94 716 aa20.98■□□□□ 0.95
XRCC3-212ENST00000555231 FAM135AQ9P2D6 1515 aa20.98■□□□□ 0.95
XRCC3-212ENST00000555231 ARHGEF5Q12774 1597 aa20.97■□□□□ 0.95
XRCC3-212ENST00000555231 PIP4K2BP78356 416 aa20.97■□□□□ 0.95
XRCC3-212ENST00000555231 SHANK2Q9UPX8 1470 aa20.96■□□□□ 0.95
XRCC3-212ENST00000555231 MIA2Q96PC5 1412 aa20.95■□□□□ 0.95
XRCC3-212ENST00000555231 CPS1P31327 1500 aa20.95■□□□□ 0.94
XRCC3-212ENST00000555231 TSPY4P0CV99 314 aa20.95■□□□□ 0.94
XRCC3-212ENST00000555231 TSPY10P0CW01 314 aa20.95■□□□□ 0.94
XRCC3-212ENST00000555231 ANKLE2Q86XL3 938 aa20.95■□□□□ 0.94
XRCC3-212ENST00000555231 UGGT1Q9NYU2 1555 aa20.94■□□□□ 0.94
XRCC3-212ENST00000555231 HSPA1LP34931 641 aa20.94■□□□□ 0.94
XRCC3-212ENST00000555231 THEMISQ8N1K5 641 aaPredicted RBP20.93■□□□□ 0.94
XRCC3-212ENST00000555231 NLRP1Q9C000 1473 aa20.93■□□□□ 0.94
XRCC3-212ENST00000555231 VWDEQ8N2E2 1590 aa20.93■□□□□ 0.94
XRCC3-212ENST00000555231 TOM1O60784 492 aa20.91■□□□□ 0.94
XRCC3-212ENST00000555231 NPHP4O75161 1426 aaPredicted RBP20.91■□□□□ 0.94
XRCC3-212ENST00000555231 CFAP65Q6ZU64 1925 aaKnown RBP20.9■□□□□ 0.94
XRCC3-212ENST00000555231 RNF17Q9BXT8 1623 aaKnown RBP20.9■□□□□ 0.94
XRCC3-212ENST00000555231 DEPDC5O75140 1603 aa20.89■□□□□ 0.94
XRCC3-212ENST00000555231 LRRC9Q6ZRR7 1453 aa20.89■□□□□ 0.94
XRCC3-212ENST00000555231 ABCC3O15438 1527 aa20.88■□□□□ 0.93
XRCC3-212ENST00000555231 IQGAP1P46940 1657 aa20.88■□□□□ 0.93
XRCC3-212ENST00000555231 MAST1Q9Y2H9 1570 aa20.88■□□□□ 0.93
XRCC3-212ENST00000555231 MED14O60244 1454 aa20.88■□□□□ 0.93
XRCC3-212ENST00000555231 CEP152O94986 1710 aa20.87■□□□□ 0.93
XRCC3-212ENST00000555231 ZC3H13Q5T200 1668 aaKnown RBP20.87■□□□□ 0.93
XRCC3-212ENST00000555231 MED1Q15648 1581 aaPredicted RBP20.87■□□□□ 0.93
XRCC3-212ENST00000555231 STRCP1A6NGW2 1772 aa20.86■□□□□ 0.93
XRCC3-212ENST00000555231 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
XRCC3-212ENST00000555231 MROH1Q8NDA8 1641 aa20.85■□□□□ 0.93
XRCC3-212ENST00000555231 EIF2AK4Q9P2K8 1649 aaKnown RBP20.85■□□□□ 0.93
XRCC3-212ENST00000555231 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
XRCC3-212ENST00000555231 ERVK-7P63135 1459 aa20.83■□□□□ 0.93
XRCC3-212ENST00000555231 KANK4Q5T7N3 995 aaPredicted RBP20.83■□□□□ 0.93
XRCC3-212ENST00000555231 LOC105371045A0A1W2PR82 267 aa20.82■□□□□ 0.92
XRCC3-212ENST00000555231 SENP3Q9H4L4 574 aaPredicted RBP20.82■□□□□ 0.92
XRCC3-212ENST00000555231 UBR1Q8IWV7 1749 aa20.8■□□□□ 0.92
XRCC3-212ENST00000555231 MYOM3Q5VTT5 1437 aa20.78■□□□□ 0.92
XRCC3-212ENST00000555231 LRRC7Q96NW7 1537 aa20.78■□□□□ 0.92
XRCC3-212ENST00000555231 DUOX2Q9NRD8 1548 aa20.76■□□□□ 0.91
XRCC3-212ENST00000555231 SYNMO15061 1565 aa20.75■□□□□ 0.91
XRCC3-212ENST00000555231 MAP3K1Q13233 1512 aa20.73■□□□□ 0.91
XRCC3-212ENST00000555231 SCAF11Q99590 1463 aaKnown RBP20.73■□□□□ 0.91
XRCC3-212ENST00000555231 LTKP29376 864 aa20.72■□□□□ 0.91
XRCC3-212ENST00000555231 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
XRCC3-212ENST00000555231 CROCC2H7BZ55 1655 aa20.72■□□□□ 0.91
XRCC3-212ENST00000555231 KIF15Q9NS87 1388 aa20.71■□□□□ 0.91
XRCC3-212ENST00000555231 PRDM15P57071 1507 aaPredicted RBP20.7■□□□□ 0.9
XRCC3-212ENST00000555231 TXNDC2Q86VQ3 553 aa20.7■□□□□ 0.9
XRCC3-212ENST00000555231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.7■□□□□ 0.9
XRCC3-212ENST00000555231 RRP7BPQ9NSQ0 103 aa20.7■□□□□ 0.9
XRCC3-212ENST00000555231 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
XRCC3-212ENST00000555231 ABCC5O15440 1437 aa20.69■□□□□ 0.9
XRCC3-212ENST00000555231 ARHGAP23Q9P227 1491 aa20.69■□□□□ 0.9
XRCC3-212ENST00000555231 SLIT1O75093 1534 aa20.68■□□□□ 0.9
XRCC3-212ENST00000555231 PIK3C2BO00750 1634 aa20.68■□□□□ 0.9
XRCC3-212ENST00000555231 PTPN23Q9H3S7 1636 aa20.68■□□□□ 0.9
XRCC3-212ENST00000555231 ARHGAP31Q2M1Z3 1444 aa20.67■□□□□ 0.9
XRCC3-212ENST00000555231 ERBINQ96RT1 1412 aa20.67■□□□□ 0.9
XRCC3-212ENST00000555231 EID1Q9Y6B2 187 aa20.64■□□□□ 0.89
XRCC3-212ENST00000555231 DAPK1P53355 1430 aa20.63■□□□□ 0.89
XRCC3-212ENST00000555231 STAG3Q9UJ98 1225 aa20.62■□□□□ 0.89
XRCC3-212ENST00000555231 CHIC2Q9UKJ5 165 aa20.61■□□□□ 0.89
XRCC3-212ENST00000555231 KANK1Q14678 1352 aa20.6■□□□□ 0.89
XRCC3-212ENST00000555231 TMEM2Q9UHN6 1383 aa20.6■□□□□ 0.89
XRCC3-212ENST00000555231 APLP2Q06481 763 aa20.59■□□□□ 0.89
XRCC3-212ENST00000555231 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.88
XRCC3-212ENST00000555231 IDI1Q13907 227 aa20.57■□□□□ 0.88
XRCC3-212ENST00000555231 FGD6Q6ZV73 1430 aa20.57■□□□□ 0.88
XRCC3-212ENST00000555231 KDM5AP29375 1690 aaKnown RBP20.55■□□□□ 0.88
XRCC3-212ENST00000555231 LMTK2Q8IWU2 1503 aa20.55■□□□□ 0.88
XRCC3-212ENST00000555231 ANKRD30AQ9BXX3 1397 aa20.55■□□□□ 0.88
XRCC3-212ENST00000555231 RBM33Q96EV2 1170 aaKnown RBP20.54■□□□□ 0.88
XRCC3-212ENST00000555231 SLC26A8Q96RN1 970 aa20.54■□□□□ 0.88
XRCC3-212ENST00000555231 TMEM94Q12767 1356 aa20.54■□□□□ 0.88
XRCC3-212ENST00000555231 RGS17Q9UGC6 210 aaPredicted RBP20.53■□□□□ 0.88
XRCC3-212ENST00000555231 TET3O43151 1660 aa20.51■□□□□ 0.87
XRCC3-212ENST00000555231 KCNA6P17658 529 aa20.51■□□□□ 0.87
XRCC3-212ENST00000555231 PROSER2Q86WR7 435 aaPredicted RBP20.51■□□□□ 0.87
XRCC3-212ENST00000555231 NOS1P29475 1434 aa20.51■□□□□ 0.87
XRCC3-212ENST00000555231 FAM135BQ49AJ0 1406 aa20.51■□□□□ 0.87
XRCC3-212ENST00000555231 ADGRB3O60242 1522 aa20.5■□□□□ 0.87
XRCC3-212ENST00000555231 ROBO1Q9Y6N7 1651 aa20.5■□□□□ 0.87
XRCC3-212ENST00000555231 MYO5BQ9ULV0 1848 aa20.48■□□□□ 0.87
XRCC3-212ENST00000555231 BCANQ96GW7 911 aa20.48■□□□□ 0.87
XRCC3-212ENST00000555231 NWD1Q149M9 1564 aa20.45■□□□□ 0.86
XRCC3-212ENST00000555231 ADGRL2O95490 1459 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms