RNA–Protein interactions for RNA: ENST00000555193.1

TGFB3-203, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-203ENST00000555193 HNRNPMP52272 730 aaKnown RBP eCLIP24.3■■□□□ 1.48
TGFB3-203ENST00000555193 ARHGAP35Q9NRY4 1499 aa24.3■■□□□ 1.48
TGFB3-203ENST00000555193 TNRQ92752 1358 aa24.29■■□□□ 1.48
TGFB3-203ENST00000555193 DEPDC5O75140 1603 aa24.29■■□□□ 1.48
TGFB3-203ENST00000555193 FBXO31Q5XUX0 539 aaPredicted RBP24.29■■□□□ 1.48
TGFB3-203ENST00000555193 ADGBQ8N7X0 1667 aa24.29■■□□□ 1.48
TGFB3-203ENST00000555193 EHMT2Q96KQ7 1210 aa24.27■■□□□ 1.48
TGFB3-203ENST00000555193 MED14O60244 1454 aa24.26■■□□□ 1.47
TGFB3-203ENST00000555193 EEA1Q15075 1411 aa24.26■■□□□ 1.47
TGFB3-203ENST00000555193 XIRP1Q702N8 1843 aaKnown RBP24.24■■□□□ 1.47
TGFB3-203ENST00000555193 UGGT1Q9NYU2 1555 aa24.22■■□□□ 1.47
TGFB3-203ENST00000555193 THEMISQ8N1K5 641 aaPredicted RBP24.2■■□□□ 1.46
TGFB3-203ENST00000555193 PZPP20742 1482 aa24.19■■□□□ 1.46
TGFB3-203ENST00000555193 FAM135AQ9P2D6 1515 aa24.18■■□□□ 1.46
TGFB3-203ENST00000555193 GPATCH8Q9UKJ3 1502 aaKnown RBP24.16■■□□□ 1.46
TGFB3-203ENST00000555193 ZC3H13Q5T200 1668 aaKnown RBP24.16■■□□□ 1.46
TGFB3-203ENST00000555193 CCDC18Q5T9S5 1454 aa24.15■■□□□ 1.46
TGFB3-203ENST00000555193 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
TGFB3-203ENST00000555193 NLRP1Q9C000 1473 aa24.13■■□□□ 1.45
TGFB3-203ENST00000555193 KDM5DQ9BY66 1539 aa24.13■■□□□ 1.45
TGFB3-203ENST00000555193 MIA2Q96PC5 1412 aa24.11■■□□□ 1.45
TGFB3-203ENST00000555193 KIAA1107Q9UPP5 1409 aa24.11■■□□□ 1.45
TGFB3-203ENST00000555193 UPF1Q92900 1129 aaKnown RBP eCLIP24.1■■□□□ 1.45
TGFB3-203ENST00000555193 PLEKHH2Q8IVE3 1493 aa24.1■■□□□ 1.45
TGFB3-203ENST00000555193 ROBO1Q9Y6N7 1651 aa24.09■■□□□ 1.45
TGFB3-203ENST00000555193 CFDP1Q9UEE9 299 aaPredicted RBP24.06■■□□□ 1.44
TGFB3-203ENST00000555193 FAM135BQ49AJ0 1406 aa24.06■■□□□ 1.44
TGFB3-203ENST00000555193 CASKIN1Q8WXD9 1431 aa24.05■■□□□ 1.44
TGFB3-203ENST00000555193 KIF3BO15066 747 aa24.04■■□□□ 1.44
TGFB3-203ENST00000555193 WASHC2CQ9Y4E1 1318 aa24.04■■□□□ 1.44
TGFB3-203ENST00000555193 DHX29Q7Z478 1369 aaKnown RBP24.02■■□□□ 1.44
TGFB3-203ENST00000555193 TRIM52Q96A61 297 aa23.99■■□□□ 1.43
TGFB3-203ENST00000555193 CFAP65Q6ZU64 1925 aaKnown RBP23.99■■□□□ 1.43
TGFB3-203ENST00000555193 PHLPP1O60346 1717 aa23.98■■□□□ 1.43
TGFB3-203ENST00000555193 UBR1Q8IWV7 1749 aa23.98■■□□□ 1.43
TGFB3-203ENST00000555193 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
TGFB3-203ENST00000555193 ZNF644Q9H582 1327 aaPredicted RBP23.98■■□□□ 1.43
TGFB3-203ENST00000555193 CCNB3Q8WWL7 1395 aa23.97■■□□□ 1.43
TGFB3-203ENST00000555193 SCAF11Q99590 1463 aaKnown RBP23.96■■□□□ 1.43
TGFB3-203ENST00000555193 SRCAPQ6ZRS2 3230 aa23.96■■□□□ 1.43
TGFB3-203ENST00000555193 MBD5Q9P267 1494 aa23.94■■□□□ 1.42
TGFB3-203ENST00000555193 RTEL1-TNFRSF6BF6WH68 1400 aa23.93■■□□□ 1.42
TGFB3-203ENST00000555193 FYCO1Q9BQS8 1478 aa23.91■■□□□ 1.42
TGFB3-203ENST00000555193 TMEM94Q12767 1356 aa23.91■■□□□ 1.42
TGFB3-203ENST00000555193 LTKP29376 864 aa23.89■■□□□ 1.41
TGFB3-203ENST00000555193 MAP3K1Q13233 1512 aa23.89■■□□□ 1.41
TGFB3-203ENST00000555193 RBM33Q96EV2 1170 aaKnown RBP23.88■■□□□ 1.41
TGFB3-203ENST00000555193 LRP6O75581 1613 aa23.88■■□□□ 1.41
TGFB3-203ENST00000555193 ERVK-7P63135 1459 aa23.87■■□□□ 1.41
TGFB3-203ENST00000555193 JCADQ9P266 1359 aa23.87■■□□□ 1.41
TGFB3-203ENST00000555193 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
TGFB3-203ENST00000555193 NCOA2Q15596 1464 aa23.86■■□□□ 1.41
TGFB3-203ENST00000555193 TXNDC2Q86VQ3 553 aa23.85■■□□□ 1.41
TGFB3-203ENST00000555193 LRRC9Q6ZRR7 1453 aa23.85■■□□□ 1.41
TGFB3-203ENST00000555193 ABCC3O15438 1527 aa23.84■■□□□ 1.41
TGFB3-203ENST00000555193 ARHGAP23Q9P227 1491 aa23.83■■□□□ 1.41
TGFB3-203ENST00000555193 MEX3CQ5U5Q3 659 aaKnown RBP23.83■■□□□ 1.41
TGFB3-203ENST00000555193 COL16A1Q07092 1604 aaPredicted RBP23.83■■□□□ 1.41
TGFB3-203ENST00000555193 CEP152O94986 1710 aa23.82■■□□□ 1.4
TGFB3-203ENST00000555193 SLIT1O75093 1534 aa23.82■■□□□ 1.4
TGFB3-203ENST00000555193 ZNF772Q68DY9 489 aaPredicted RBP23.81■■□□□ 1.4
TGFB3-203ENST00000555193 CCDC141Q6ZP82 1450 aa23.79■■□□□ 1.4
TGFB3-203ENST00000555193 PROSER2Q86WR7 435 aaPredicted RBP23.78■■□□□ 1.4
TGFB3-203ENST00000555193 RXRBP28702 533 aa23.76■■□□□ 1.39
TGFB3-203ENST00000555193 MTUS2Q5JR59 1369 aa23.76■■□□□ 1.39
TGFB3-203ENST00000555193 EID1Q9Y6B2 187 aa23.75■■□□□ 1.39
TGFB3-203ENST00000555193 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
TGFB3-203ENST00000555193 SLAIN2Q9P270 581 aa23.73■■□□□ 1.39
TGFB3-203ENST00000555193 PIK3C2BO00750 1634 aa23.73■■□□□ 1.39
TGFB3-203ENST00000555193 KCNA6P17658 529 aa23.72■■□□□ 1.39
TGFB3-203ENST00000555193 SHPRHQ149N8 1683 aa23.71■■□□□ 1.39
TGFB3-203ENST00000555193 CAMSAP2Q08AD1 1489 aa23.71■■□□□ 1.39
TGFB3-203ENST00000555193 MSH6P52701 1360 aa23.71■■□□□ 1.39
TGFB3-203ENST00000555193 SPATA31A6Q5VVP1 1343 aa23.71■■□□□ 1.39
TGFB3-203ENST00000555193 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.39
TGFB3-203ENST00000555193 CDK12Q9NYV4 1490 aaPredicted RBP23.7■■□□□ 1.38
TGFB3-203ENST00000555193 SLC26A8Q96RN1 970 aa23.69■■□□□ 1.38
TGFB3-203ENST00000555193 NWD1Q149M9 1564 aa23.67■■□□□ 1.38
TGFB3-203ENST00000555193 NKTRP30414 1462 aaKnown RBP23.67■■□□□ 1.38
TGFB3-203ENST00000555193 KDM5AP29375 1690 aaKnown RBP23.66■■□□□ 1.38
TGFB3-203ENST00000555193 FGD6Q6ZV73 1430 aa23.66■■□□□ 1.38
TGFB3-203ENST00000555193 TMEM2Q9UHN6 1383 aa23.65■■□□□ 1.38
TGFB3-203ENST00000555193 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.38
TGFB3-203ENST00000555193 TET3O43151 1660 aa23.64■■□□□ 1.38
TGFB3-203ENST00000555193 EIF2AK4Q9P2K8 1649 aaKnown RBP23.64■■□□□ 1.38
TGFB3-203ENST00000555193 RGS12O14924 1447 aa23.63■■□□□ 1.37
TGFB3-203ENST00000555193 NUTM2BA6NNL0 878 aaPredicted RBP23.61■■□□□ 1.37
TGFB3-203ENST00000555193 NUTM2EB1AL46 878 aaPredicted RBP23.61■■□□□ 1.37
TGFB3-203ENST00000555193 NUTM2AQ8IVF1 878 aaPredicted RBP23.61■■□□□ 1.37
TGFB3-203ENST00000555193 SETBP1Q9Y6X0 1596 aa23.61■■□□□ 1.37
TGFB3-203ENST00000555193 STAG3Q9UJ98 1225 aa23.6■■□□□ 1.37
TGFB3-203ENST00000555193 ARHGEF5Q12774 1597 aa23.6■■□□□ 1.37
TGFB3-203ENST00000555193 AFF2P51816 1311 aa23.59■■□□□ 1.37
TGFB3-203ENST00000555193 AHDC1Q5TGY3 1603 aaPredicted RBP23.59■■□□□ 1.37
TGFB3-203ENST00000555193 EFCAB6Q5THR3 1501 aa23.59■■□□□ 1.37
TGFB3-203ENST00000555193 RSPH4AQ5TD94 716 aa23.57■■□□□ 1.36
TGFB3-203ENST00000555193 NUTM2DQ5VT03 806 aaPredicted RBP23.57■■□□□ 1.36
TGFB3-203ENST00000555193 CEP162Q5TB80 1403 aa23.57■■□□□ 1.36
TGFB3-203ENST00000555193 CHD2O14647 1828 aaKnown RBP23.56■■□□□ 1.36
TGFB3-203ENST00000555193 TSPY4P0CV99 314 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms