RNA–Protein interactions for RNA: ENST00000555137.5

HNRNPC-216, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-216ENST00000555137 KIF3BO15066 747 aa15.51■□□□□ 0.07
HNRNPC-216ENST00000555137 FBXO31Q5XUX0 539 aaPredicted RBP15.51■□□□□ 0.07
HNRNPC-216ENST00000555137 KDM5DQ9BY66 1539 aa15.51■□□□□ 0.07
HNRNPC-216ENST00000555137 NEURL4Q96JN8 1562 aa15.5■□□□□ 0.07
HNRNPC-216ENST00000555137 PZPP20742 1482 aa15.5■□□□□ 0.07
HNRNPC-216ENST00000555137 TNRQ92752 1358 aa15.49■□□□□ 0.07
HNRNPC-216ENST00000555137 POLR1AO95602 1720 aaPredicted RBP15.48■□□□□ 0.07
HNRNPC-216ENST00000555137 UBAP1LF5GYI3 381 aa15.48■□□□□ 0.07
HNRNPC-216ENST00000555137 ARHGEF5Q12774 1597 aa15.48■□□□□ 0.07
HNRNPC-216ENST00000555137 FAM135AQ9P2D6 1515 aa15.48■□□□□ 0.07
HNRNPC-216ENST00000555137 SOCS7O14512 581 aa15.46■□□□□ 0.07
HNRNPC-216ENST00000555137 WASHC2CQ9Y4E1 1318 aa15.44■□□□□ 0.06
HNRNPC-216ENST00000555137 LRRC9Q6ZRR7 1453 aa15.44■□□□□ 0.06
HNRNPC-216ENST00000555137 RSPH4AQ5TD94 716 aa15.43■□□□□ 0.06
HNRNPC-216ENST00000555137 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.43■□□□□ 0.062e-10■□□□□ 8.9
HNRNPC-216ENST00000555137 RNF17Q9BXT8 1623 aaKnown RBP15.43■□□□□ 0.06
HNRNPC-216ENST00000555137 VPS8Q8N3P4 1428 aa15.43■□□□□ 0.06
HNRNPC-216ENST00000555137 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
HNRNPC-216ENST00000555137 VWDEQ8N2E2 1590 aa15.41■□□□□ 0.06
HNRNPC-216ENST00000555137 MAST1Q9Y2H9 1570 aa15.41■□□□□ 0.06
HNRNPC-216ENST00000555137 SHANK2Q9UPX8 1470 aa15.41■□□□□ 0.06
HNRNPC-216ENST00000555137 MROH1Q8NDA8 1641 aa15.41■□□□□ 0.06
HNRNPC-216ENST00000555137 ABCC3O15438 1527 aa15.41■□□□□ 0.06
HNRNPC-216ENST00000555137 UGGT1Q9NYU2 1555 aa15.41■□□□□ 0.06
HNRNPC-216ENST00000555137 NLRP1Q9C000 1473 aa15.4■□□□□ 0.06
HNRNPC-216ENST00000555137 CPS1P31327 1500 aa15.39■□□□□ 0.05
HNRNPC-216ENST00000555137 TSPY4P0CV99 314 aa15.39■□□□□ 0.05
HNRNPC-216ENST00000555137 TSPY10P0CW01 314 aa15.39■□□□□ 0.05
HNRNPC-216ENST00000555137 KANK4Q5T7N3 995 aaPredicted RBP15.39■□□□□ 0.05
HNRNPC-216ENST00000555137 DEPDC5O75140 1603 aa15.39■□□□□ 0.05
HNRNPC-216ENST00000555137 LOC105371045A0A1W2PR82 267 aa15.38■□□□□ 0.05
HNRNPC-216ENST00000555137 MED14O60244 1454 aa15.38■□□□□ 0.05
HNRNPC-216ENST00000555137 ZC3H13Q5T200 1668 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-216ENST00000555137 NPHP4O75161 1426 aaPredicted RBP15.37■□□□□ 0.05
HNRNPC-216ENST00000555137 EIF2AK4Q9P2K8 1649 aaKnown RBP15.37■□□□□ 0.05
HNRNPC-216ENST00000555137 ALKQ9UM73 1620 aa15.37■□□□□ 0.05
HNRNPC-216ENST00000555137 ANKLE2Q86XL3 938 aa15.37■□□□□ 0.05
HNRNPC-216ENST00000555137 ERVK-7P63135 1459 aa15.36■□□□□ 0.05
HNRNPC-216ENST00000555137 THEMISQ8N1K5 641 aaPredicted RBP15.36■□□□□ 0.05
HNRNPC-216ENST00000555137 MYOM3Q5VTT5 1437 aa15.35■□□□□ 0.05
HNRNPC-216ENST00000555137 CEP152O94986 1710 aa15.35■□□□□ 0.05
HNRNPC-216ENST00000555137 MAP3K1Q13233 1512 aa15.35■□□□□ 0.05
HNRNPC-216ENST00000555137 HSPA1LP34931 641 aa15.35■□□□□ 0.05
HNRNPC-216ENST00000555137 IQGAP1P46940 1657 aa15.35■□□□□ 0.05
HNRNPC-216ENST00000555137 STRCP1A6NGW2 1772 aa15.34■□□□□ 0.05
HNRNPC-216ENST00000555137 PIP4K2BP78356 416 aa15.34■□□□□ 0.05
HNRNPC-216ENST00000555137 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
HNRNPC-216ENST00000555137 MED1Q15648 1581 aaPredicted RBP15.32■□□□□ 0.04
HNRNPC-216ENST00000555137 CFAP65Q6ZU64 1925 aaKnown RBP15.31■□□□□ 0.04
HNRNPC-216ENST00000555137 TOM1O60784 492 aa15.31■□□□□ 0.04
HNRNPC-216ENST00000555137 DUOX2Q9NRD8 1548 aa15.31■□□□□ 0.04
HNRNPC-216ENST00000555137 UBR1Q8IWV7 1749 aa15.31■□□□□ 0.04
HNRNPC-216ENST00000555137 PRDM15P57071 1507 aaPredicted RBP15.3■□□□□ 0.04
HNRNPC-216ENST00000555137 CROCC2H7BZ55 1655 aa15.29■□□□□ 0.04
HNRNPC-216ENST00000555137 LRRC7Q96NW7 1537 aa15.29■□□□□ 0.04
HNRNPC-216ENST00000555137 ABCC5O15440 1437 aa15.28■□□□□ 0.04
HNRNPC-216ENST00000555137 KIF15Q9NS87 1388 aa15.28■□□□□ 0.04
HNRNPC-216ENST00000555137 PTPN23Q9H3S7 1636 aa15.26■□□□□ 0.03
HNRNPC-216ENST00000555137 SYNMO15061 1565 aa15.26■□□□□ 0.03
HNRNPC-216ENST00000555137 SCAF11Q99590 1463 aaKnown RBP15.26■□□□□ 0.03
HNRNPC-216ENST00000555137 ARHGAP23Q9P227 1491 aa15.26■□□□□ 0.03
HNRNPC-216ENST00000555137 ARHGAP31Q2M1Z3 1444 aa15.26■□□□□ 0.03
HNRNPC-216ENST00000555137 LTKP29376 864 aa15.25■□□□□ 0.03
HNRNPC-216ENST00000555137 SLIT1O75093 1534 aa15.25■□□□□ 0.03
HNRNPC-216ENST00000555137 ERBINQ96RT1 1412 aa15.25■□□□□ 0.03
HNRNPC-216ENST00000555137 RRP7BPQ9NSQ0 103 aa15.24■□□□□ 0.03
HNRNPC-216ENST00000555137 PIK3C2BO00750 1634 aa15.23■□□□□ 0.03
HNRNPC-216ENST00000555137 DAPK1P53355 1430 aa15.23■□□□□ 0.03
HNRNPC-216ENST00000555137 FGD6Q6ZV73 1430 aa15.21■□□□□ 0.03
HNRNPC-216ENST00000555137 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
HNRNPC-216ENST00000555137 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.03
HNRNPC-216ENST00000555137 TXNDC2Q86VQ3 553 aa15.2■□□□□ 0.02
HNRNPC-216ENST00000555137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.2■□□□□ 0.021e-8■■□□□ 11.5
HNRNPC-216ENST00000555137 TMEM2Q9UHN6 1383 aa15.18■□□□□ 0.02
HNRNPC-216ENST00000555137 LMTK2Q8IWU2 1503 aa15.17■□□□□ 0.02
HNRNPC-216ENST00000555137 CHIC2Q9UKJ5 165 aa15.16■□□□□ 0.02
HNRNPC-216ENST00000555137 EFCAB6Q5THR3 1501 aa15.16■□□□□ 0.02
HNRNPC-216ENST00000555137 KDM5AP29375 1690 aaKnown RBP15.15■□□□□ 0.02
HNRNPC-216ENST00000555137 KANK1Q14678 1352 aa15.14■□□□□ 0.01
HNRNPC-216ENST00000555137 ANKRD30AQ9BXX3 1397 aa15.14■□□□□ 0.01
HNRNPC-216ENST00000555137 IDI1Q13907 227 aa15.14■□□□□ 0.01
HNRNPC-216ENST00000555137 EID1Q9Y6B2 187 aa15.14■□□□□ 0.01
HNRNPC-216ENST00000555137 TET3O43151 1660 aa15.13■□□□□ 0.01
HNRNPC-216ENST00000555137 NOS1P29475 1434 aa15.13■□□□□ 0.01
HNRNPC-216ENST00000555137 PHF23Q9BUL5 403 aaPredicted RBP15.13■□□□□ 0.01
HNRNPC-216ENST00000555137 APLP2Q06481 763 aa15.12■□□□□ 0.01
HNRNPC-216ENST00000555137 ADGRL2O95490 1459 aa15.12■□□□□ 0.01
HNRNPC-216ENST00000555137 ADGRB3O60242 1522 aa15.12■□□□□ 0.01
HNRNPC-216ENST00000555137 STAG3Q9UJ98 1225 aa15.11■□□□□ 0.01
HNRNPC-216ENST00000555137 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
HNRNPC-216ENST00000555137 SLC26A8Q96RN1 970 aa15.1■□□□□ 0.01
HNRNPC-216ENST00000555137 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
HNRNPC-216ENST00000555137 RGS17Q9UGC6 210 aaPredicted RBP15.08■□□□□ 0
HNRNPC-216ENST00000555137 FAM135BQ49AJ0 1406 aa15.08■□□□□ 0
HNRNPC-216ENST00000555137 NWD1Q149M9 1564 aa15.07■□□□□ 0
HNRNPC-216ENST00000555137 KCNA6P17658 529 aa15.07■□□□□ 0
HNRNPC-216ENST00000555137 ANKRD50Q9ULJ7 1429 aa15.06■□□□□ 0
HNRNPC-216ENST00000555137 ROBO1Q9Y6N7 1651 aa15.06■□□□□ 0
HNRNPC-216ENST00000555137 MYO5BQ9ULV0 1848 aa15.06■□□□□ 0
HNRNPC-216ENST00000555137 ZFYVE9O95405 1425 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms