RNA–Protein interactions for RNA: ENST00000555117.1

COCH-208, Transcript of cochlin, humanhuman

TSL 2

Gene COCH, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-208ENST00000555117 KDM5DQ9BY66 1539 aa34.82■■■■□ 3.16
COCH-208ENST00000555117 FAM135AQ9P2D6 1515 aa34.82■■■■□ 3.16
COCH-208ENST00000555117 CERKQ8TCT0 537 aa34.82■■■■□ 3.16
COCH-208ENST00000555117 CEP170BQ9Y4F5 1589 aaPredicted RBP34.81■■■■□ 3.16
COCH-208ENST00000555117 PTPN23Q9H3S7 1636 aa34.74■■■■□ 3.15
COCH-208ENST00000555117 RNF17Q9BXT8 1623 aaKnown RBP34.73■■■■□ 3.15
COCH-208ENST00000555117 EIF2AK4Q9P2K8 1649 aaKnown RBP34.73■■■■□ 3.15
COCH-208ENST00000555117 CROCC2H7BZ55 1655 aa34.73■■■■□ 3.15
COCH-208ENST00000555117 WASHC2CQ9Y4E1 1318 aa34.72■■■■□ 3.15
COCH-208ENST00000555117 PZPP20742 1482 aa34.71■■■■□ 3.15
COCH-208ENST00000555117 PLA2R1Q13018 1463 aa34.69■■■■□ 3.14
COCH-208ENST00000555117 ZC3H13Q5T200 1668 aaKnown RBP34.67■■■■□ 3.14
COCH-208ENST00000555117 A2ML1A8K2U0 1454 aa34.67■■■■□ 3.14
COCH-208ENST00000555117 DNMT1P26358 1616 aaKnown RBP34.66■■■■□ 3.14
COCH-208ENST00000555117 NCKAP5LQ9HCH0 1330 aa34.65■■■■□ 3.14
COCH-208ENST00000555117 FBXO31Q5XUX0 539 aaPredicted RBP34.65■■■■□ 3.14
COCH-208ENST00000555117 TNRQ92752 1358 aa34.64■■■■□ 3.14
COCH-208ENST00000555117 DUOX2Q9NRD8 1548 aa34.64■■■■□ 3.14
COCH-208ENST00000555117 SHANK2Q9UPX8 1470 aa34.64■■■■□ 3.14
COCH-208ENST00000555117 FGD6Q6ZV73 1430 aa34.63■■■■□ 3.13
COCH-208ENST00000555117 TCOF1Q13428 1488 aaKnown RBP34.62■■■■□ 3.13
COCH-208ENST00000555117 ABCC5O15440 1437 aa34.62■■■■□ 3.13
COCH-208ENST00000555117 MROH1Q8NDA8 1641 aa34.62■■■■□ 3.13
COCH-208ENST00000555117 LTBP4Q8N2S1 1624 aa34.61■■■■□ 3.13
COCH-208ENST00000555117 ABCC3O15438 1527 aa34.6■■■■□ 3.13
COCH-208ENST00000555117 CEP152O94986 1710 aa34.58■■■■□ 3.13
COCH-208ENST00000555117 PKD2Q13563 968 aa34.58■■■■□ 3.13
COCH-208ENST00000555117 DAPK1P53355 1430 aa34.57■■■■□ 3.13
COCH-208ENST00000555117 POLR1AO95602 1720 aaPredicted RBP34.55■■■■□ 3.12
COCH-208ENST00000555117 KIF15Q9NS87 1388 aa34.55■■■■□ 3.12
COCH-208ENST00000555117 ERBINQ96RT1 1412 aa34.51■■■■□ 3.12
COCH-208ENST00000555117 NLRP1Q9C000 1473 aa34.51■■■■□ 3.11
COCH-208ENST00000555117 SPATA31D1Q6ZQQ2 1576 aa34.49■■■■□ 3.11
COCH-208ENST00000555117 RRP7BPQ9NSQ0 103 aa34.49■■■■□ 3.11
COCH-208ENST00000555117 PRDM15P57071 1507 aaPredicted RBP34.48■■■■□ 3.11
COCH-208ENST00000555117 CFAP65Q6ZU64 1925 aaKnown RBP34.46■■■■□ 3.11
COCH-208ENST00000555117 UGGT1Q9NYU2 1555 aa34.46■■■■□ 3.11
COCH-208ENST00000555117 IQSEC2Q5JU85 1478 aa34.46■■■■□ 3.11
COCH-208ENST00000555117 ZNF335Q9H4Z2 1342 aaPredicted RBP34.45■■■■□ 3.11
COCH-208ENST00000555117 ERVK-7P63135 1459 aa34.45■■■■□ 3.1
COCH-208ENST00000555117 NEURL4Q96JN8 1562 aa34.45■■■■□ 3.1
COCH-208ENST00000555117 DEPDC5O75140 1603 aa34.44■■■■□ 3.1
COCH-208ENST00000555117 ANKRD30AQ9BXX3 1397 aa34.4■■■■□ 3.1
COCH-208ENST00000555117 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.4■■■■□ 3.18e-9■■■□□ 17.4
COCH-208ENST00000555117 CHIC2Q9UKJ5 165 aa34.4■■■■□ 3.1
COCH-208ENST00000555117 THEMISQ8N1K5 641 aaPredicted RBP34.38■■■■□ 3.09
COCH-208ENST00000555117 ARHGAP31Q2M1Z3 1444 aa34.33■■■■□ 3.09
COCH-208ENST00000555117 FAM50AQ14320 339 aaKnown RBP34.33■■■■□ 3.09
COCH-208ENST00000555117 ANKLE2Q86XL3 938 aa34.33■■■■□ 3.09
COCH-208ENST00000555117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.33■■■■□ 3.09
COCH-208ENST00000555117 ADGRL2O95490 1459 aa34.33■■■■□ 3.09
COCH-208ENST00000555117 UBR1Q8IWV7 1749 aa34.31■■■■□ 3.08
COCH-208ENST00000555117 KANK1Q14678 1352 aa34.29■■■■□ 3.08
COCH-208ENST00000555117 MED14O60244 1454 aa34.27■■■■□ 3.08
COCH-208ENST00000555117 VWDEQ8N2E2 1590 aa34.27■■■■□ 3.08
COCH-208ENST00000555117 IQGAP1P46940 1657 aa34.26■■■■□ 3.08
COCH-208ENST00000555117 LMTK2Q8IWU2 1503 aa34.25■■■■□ 3.07
COCH-208ENST00000555117 NPHP4O75161 1426 aaPredicted RBP34.25■■■■□ 3.07
COCH-208ENST00000555117 CPS1P31327 1500 aa34.2■■■■□ 3.06
COCH-208ENST00000555117 PIK3C2BO00750 1634 aa34.19■■■■□ 3.06
COCH-208ENST00000555117 EFCAB6Q5THR3 1501 aa34.16■■■■□ 3.06
COCH-208ENST00000555117 ANKRD50Q9ULJ7 1429 aa34.16■■■■□ 3.06
COCH-208ENST00000555117 UBAP1LF5GYI3 381 aa34.14■■■■□ 3.06
COCH-208ENST00000555117 SLIT1O75093 1534 aa34.13■■■■□ 3.05
COCH-208ENST00000555117 ARHGAP23Q9P227 1491 aa34.12■■■■□ 3.05
COCH-208ENST00000555117 SYNMO15061 1565 aa34.11■■■■□ 3.05
COCH-208ENST00000555117 SCAF11Q99590 1463 aaKnown RBP34.11■■■■□ 3.05
COCH-208ENST00000555117 KDM5AP29375 1690 aaKnown RBP34.1■■■■□ 3.05
COCH-208ENST00000555117 STRCP1A6NGW2 1772 aa34.08■■■■□ 3.05
COCH-208ENST00000555117 NOS1P29475 1434 aa34.05■■■■□ 3.04
COCH-208ENST00000555117 UNC13BO14795 1591 aa34.05■■■■□ 3.04
COCH-208ENST00000555117 TET3O43151 1660 aa34.05■■■■□ 3.04
COCH-208ENST00000555117 PPARGC1BQ86YN6 1023 aaKnown RBP34.04■■■■□ 3.04
COCH-208ENST00000555117 LTKP29376 864 aa34.03■■■■□ 3.04
COCH-208ENST00000555117 STAG3Q9UJ98 1225 aa34.03■■■■□ 3.04
COCH-208ENST00000555117 ROCK1Q13464 1354 aa34.02■■■■□ 3.04
COCH-208ENST00000555117 TXNDC2Q86VQ3 553 aa34.02■■■■□ 3.04
COCH-208ENST00000555117 GCC2Q8IWJ2 1684 aa34.02■■■■□ 3.04
COCH-208ENST00000555117 IDI1Q13907 227 aa34.01■■■■□ 3.03
COCH-208ENST00000555117 RPRD2Q5VT52 1461 aaKnown RBP34.01■■■■□ 3.03
COCH-208ENST00000555117 TMEM2Q9UHN6 1383 aa34■■■■□ 3.03
COCH-208ENST00000555117 EID1Q9Y6B2 187 aa33.99■■■■□ 3.03
COCH-208ENST00000555117 ADGRB3O60242 1522 aa33.98■■■■□ 3.03
COCH-208ENST00000555117 TOM1O60784 492 aa33.93■■■■□ 3.02
COCH-208ENST00000555117 ITGAEP38570 1179 aa33.93■■■■□ 3.02
COCH-208ENST00000555117 LRRC7Q96NW7 1537 aa33.93■■■■□ 3.02
COCH-208ENST00000555117 IQGAP3Q86VI3 1631 aa33.91■■■■□ 3.02
COCH-208ENST00000555117 DISP3Q9P2K9 1392 aa33.91■■■■□ 3.02
COCH-208ENST00000555117 SLC52A1Q9NWF4 448 aa33.91■■■■□ 3.02
COCH-208ENST00000555117 MYO5BQ9ULV0 1848 aa33.9■■■■□ 3.02
COCH-208ENST00000555117 E9PCH4 1651 aa33.9■■■■□ 3.02
COCH-208ENST00000555117 SCAF1Q9H7N4 1312 aaKnown RBP33.9■■■■□ 3.02
COCH-208ENST00000555117 PIP4K2BP78356 416 aa33.88■■■■□ 3.01
COCH-208ENST00000555117 ALKQ9UM73 1620 aa33.87■■■■□ 3.01
COCH-208ENST00000555117 XIRP1Q702N8 1843 aaKnown RBP33.82■■■■□ 3
COCH-208ENST00000555117 TMEM131LA2VDJ0 1609 aa33.82■■■■□ 3
COCH-208ENST00000555117 NUP155O75694 1391 aa33.78■■■■□ 3
COCH-208ENST00000555117 RRBP1Q9P2E9 1410 aaKnown RBP33.78■■■■□ 3
COCH-208ENST00000555117 HSPA1LP34931 641 aa33.76■■■□□ 2.99
COCH-208ENST00000555117 ZFYVE9O95405 1425 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms