RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 MAP2K5Q13163 448 aa10.23□□□□□ -0.77
FCF1-207ENST00000554973 HOXB1P14653 301 aaPredicted RBP10.22□□□□□ -0.77
FCF1-207ENST00000554973 HS3ST6Q96QI5 342 aa10.22□□□□□ -0.77
FCF1-207ENST00000554973 TRAIPQ9BWF2 469 aa10.22□□□□□ -0.77
FCF1-207ENST00000554973 IRF6O14896 467 aa10.21□□□□□ -0.77
FCF1-207ENST00000554973 PDIA6Q15084 440 aa10.21□□□□□ -0.77
FCF1-207ENST00000554973 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.77
FCF1-207ENST00000554973 PARP9Q8IXQ6 854 aa10.21□□□□□ -0.77
FCF1-207ENST00000554973 CCDC102AQ96A19 550 aa10.21□□□□□ -0.77
FCF1-207ENST00000554973 CLUAP1Q96AJ1 413 aa10.21□□□□□ -0.77
FCF1-207ENST00000554973 KCTD17Q8N5Z5 321 aa10.2□□□□□ -0.78
FCF1-207ENST00000554973 ZSWIM6Q9HCJ5 1215 aa10.2□□□□□ -0.78
FCF1-207ENST00000554973 DPYSL4O14531 572 aa10.19□□□□□ -0.78
FCF1-207ENST00000554973 PCMTD1Q96MG8 357 aaPredicted RBP10.18□□□□□ -0.78
FCF1-207ENST00000554973 ERBB3P21860 1342 aa10.17□□□□□ -0.78
FCF1-207ENST00000554973 GPHNQ9NQX3 736 aaPredicted RBP10.17□□□□□ -0.78
FCF1-207ENST00000554973 EMILIN3Q9NT22 766 aa10.15□□□□□ -0.78
FCF1-207ENST00000554973 SERPINA10Q9UK55 444 aa10.15□□□□□ -0.78
FCF1-207ENST00000554973 POTEB3A0JP26 581 aa10.13□□□□□ -0.79
FCF1-207ENST00000554973 MCM6Q14566 821 aa10.13□□□□□ -0.79
FCF1-207ENST00000554973 POTEBQ6S5H4 581 aa10.13□□□□□ -0.79
FCF1-207ENST00000554973 NUTM2FA1L443 756 aa10.12□□□□□ -0.79
FCF1-207ENST00000554973 GNPATO15228 680 aa10.12□□□□□ -0.79
FCF1-207ENST00000554973 SPNS2Q8IVW8 549 aa10.12□□□□□ -0.79
FCF1-207ENST00000554973 PROSER2Q86WR7 435 aaPredicted RBP10.11□□□□□ -0.79
FCF1-207ENST00000554973 TMC2Q8TDI7 906 aa10.11□□□□□ -0.79
FCF1-207ENST00000554973 ZNF777Q9ULD5 760 aaPredicted RBP10.11□□□□□ -0.79
FCF1-207ENST00000554973 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
FCF1-207ENST00000554973 HIC1Q14526 733 aa10.1□□□□□ -0.79
FCF1-207ENST00000554973 GPR153Q6NV75 609 aa10.1□□□□□ -0.79
FCF1-207ENST00000554973 CCDC97Q96F63 343 aaPredicted RBP10.1□□□□□ -0.79
FCF1-207ENST00000554973 KIF3CO14782 793 aa10.09□□□□□ -0.79
FCF1-207ENST00000554973 RAD21O60216 631 aa10.09□□□□□ -0.79
FCF1-207ENST00000554973 TTLL12Q14166 644 aaPredicted RBP10.09□□□□□ -0.79
FCF1-207ENST00000554973 VARS2Q5ST30 1063 aaKnown RBP10.08□□□□□ -0.8
FCF1-207ENST00000554973 FNBP4Q8N3X1 1017 aaPredicted RBP10.08□□□□□ -0.8
FCF1-207ENST00000554973 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
FCF1-207ENST00000554973 KRTAP3-2Q9BYR7 98 aa10.08□□□□□ -0.8
FCF1-207ENST00000554973 MMRN1Q13201 1228 aa10.07□□□□□ -0.8
FCF1-207ENST00000554973 ARSIQ5FYB1 569 aa10.07□□□□□ -0.8
FCF1-207ENST00000554973 FCHSD2O94868 740 aa10.06□□□□□ -0.8
FCF1-207ENST00000554973 SH3D19Q5HYK7 790 aa10.06□□□□□ -0.8
FCF1-207ENST00000554973 AEBP1Q8IUX7 1158 aa10.06□□□□□ -0.8
FCF1-207ENST00000554973 GRXCR2A6NFK2 248 aa10.05□□□□□ -0.8
FCF1-207ENST00000554973 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
FCF1-207ENST00000554973 MS4A1P11836 297 aa10.04□□□□□ -0.8
FCF1-207ENST00000554973 DSG2Q14126 1118 aa10.04□□□□□ -0.8
FCF1-207ENST00000554973 RGS22Q8NE09 1264 aa10.04□□□□□ -0.8
FCF1-207ENST00000554973 FECHP22830 423 aa10.02□□□□□ -0.81
FCF1-207ENST00000554973 TMCO4Q5TGY1 634 aa10.02□□□□□ -0.81
FCF1-207ENST00000554973 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
FCF1-207ENST00000554973 OSBPP22059 807 aa10.01□□□□□ -0.81
FCF1-207ENST00000554973 FOXK1P85037 733 aa10.01□□□□□ -0.81
FCF1-207ENST00000554973 SKIV2LQ15477 1246 aaKnown RBP10.01□□□□□ -0.81
FCF1-207ENST00000554973 SLC34A2O95436 690 aa10□□□□□ -0.81
FCF1-207ENST00000554973 KHSRPQ92945 711 aaKnown RBP eCLIP10□□□□□ -0.81
FCF1-207ENST00000554973 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
FCF1-207ENST00000554973 POM121Q96HA1 1249 aa9.99□□□□□ -0.81
FCF1-207ENST00000554973 NUDT7P0C024 238 aa9.98□□□□□ -0.81
FCF1-207ENST00000554973 PCDHGA4Q9Y5G9 962 aa9.98□□□□□ -0.81
FCF1-207ENST00000554973 MAP3K9P80192 1104 aa9.97□□□□□ -0.81
FCF1-207ENST00000554973 RETREG2Q8NC44 543 aa9.97□□□□□ -0.81
FCF1-207ENST00000554973 REPIN1Q9BWE0 567 aaKnown RBP9.97□□□□□ -0.81
FCF1-207ENST00000554973 GZF1Q9H116 711 aaPredicted RBP9.97□□□□□ -0.81
FCF1-207ENST00000554973 MTMR7Q9Y216 660 aa9.97□□□□□ -0.81
FCF1-207ENST00000554973 PTGER2P43116 358 aa9.96□□□□□ -0.82
FCF1-207ENST00000554973 SPDYE5A6NIY4 337 aa9.95□□□□□ -0.82
FCF1-207ENST00000554973 PDE4CQ08493 712 aa9.95□□□□□ -0.82
FCF1-207ENST00000554973 TMUB1Q9BVT8 246 aa9.95□□□□□ -0.82
FCF1-207ENST00000554973 PPP1R15AO75807 674 aaPredicted RBP9.94□□□□□ -0.82
FCF1-207ENST00000554973 CLCN1P35523 988 aa9.94□□□□□ -0.82
FCF1-207ENST00000554973 MFAP1P55081 439 aaKnown RBP9.94□□□□□ -0.82
FCF1-207ENST00000554973 PTGDRQ13258 359 aa9.93□□□□□ -0.82
FCF1-207ENST00000554973 PLPP6Q8IY26 295 aa9.93□□□□□ -0.82
FCF1-207ENST00000554973 COG6Q9Y2V7 657 aa9.93□□□□□ -0.82
FCF1-207ENST00000554973 IRF5Q13568 498 aa9.92□□□□□ -0.82
FCF1-207ENST00000554973 PROCA1Q8NCQ7 364 aaPredicted RBP9.91□□□□□ -0.82
FCF1-207ENST00000554973 BANK1Q8NDB2 785 aa9.91□□□□□ -0.82
FCF1-207ENST00000554973 LHX6Q9UPM6 363 aa9.91□□□□□ -0.82
FCF1-207ENST00000554973 ZNF330Q9Y3S2 320 aaPredicted RBP9.91□□□□□ -0.82
FCF1-207ENST00000554973 ACIN1Q9UKV3 1341 aaKnown RBP9.9□□□□□ -0.82
FCF1-207ENST00000554973 TBC1D12O60347 775 aa9.9□□□□□ -0.82
FCF1-207ENST00000554973 GPCPD1Q9NPB8 672 aa9.9□□□□□ -0.82
FCF1-207ENST00000554973 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
FCF1-207ENST00000554973 PATL2C9JE40 543 aaKnown RBP9.89□□□□□ -0.83
FCF1-207ENST00000554973 SSTR3P32745 418 aaPredicted RBP9.89□□□□□ -0.83
FCF1-207ENST00000554973 PTCD2Q8WV60 388 aaKnown RBP9.89□□□□□ -0.83
FCF1-207ENST00000554973 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
FCF1-207ENST00000554973 LOC105371045A0A1W2PR82 267 aa9.88□□□□□ -0.83
FCF1-207ENST00000554973 PBX2P40425 430 aa9.88□□□□□ -0.83
FCF1-207ENST00000554973 ANKRD13DQ6ZTN6 518 aa9.87□□□□□ -0.83
FCF1-207ENST00000554973 DDX12PQ92771 950 aa9.87□□□□□ -0.83
FCF1-207ENST00000554973 RNF166Q96A37 237 aaPredicted RBP9.87□□□□□ -0.83
FCF1-207ENST00000554973 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.87□□□□□ -0.83
FCF1-207ENST00000554973 SHROOM4Q9ULL8 1493 aa9.86□□□□□ -0.83
FCF1-207ENST00000554973 FBXW7Q969H0 707 aa9.86□□□□□ -0.83
FCF1-207ENST00000554973 BEGAINQ9BUH8 593 aa9.86□□□□□ -0.83
FCF1-207ENST00000554973 MYT1LQ9UL68 1186 aa9.86□□□□□ -0.83
FCF1-207ENST00000554973 RBM25P49756 843 aaKnown RBP9.85□□□□□ -0.83
FCF1-207ENST00000554973 LSM11P83369 360 aaKnown RBP eCLIP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms