RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 ARHGEF5Q12774 1597 aa18.57■□□□□ 0.56
PSMC6-207ENST00000554952 STRCQ7RTU9 1775 aa18.57■□□□□ 0.56
PSMC6-207ENST00000554952 MIA2Q96PC5 1412 aa18.57■□□□□ 0.56
PSMC6-207ENST00000554952 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
PSMC6-207ENST00000554952 PTPRKQ15262 1439 aa18.56■□□□□ 0.56
PSMC6-207ENST00000554952 FBXO31Q5XUX0 539 aaPredicted RBP18.53■□□□□ 0.56
PSMC6-207ENST00000554952 NCKAP5LQ9HCH0 1330 aa18.51■□□□□ 0.55
PSMC6-207ENST00000554952 PTPRTO14522 1441 aa18.5■□□□□ 0.55
PSMC6-207ENST00000554952 NCOA1Q15788 1441 aa18.5■□□□□ 0.55
PSMC6-207ENST00000554952 CAMSAP1Q5T5Y3 1602 aa18.49■□□□□ 0.55
PSMC6-207ENST00000554952 RRP7BPQ9NSQ0 103 aa18.47■□□□□ 0.55
PSMC6-207ENST00000554952 MAST1Q9Y2H9 1570 aa18.47■□□□□ 0.55
PSMC6-207ENST00000554952 PKD2Q13563 968 aa18.46■□□□□ 0.55
PSMC6-207ENST00000554952 TNRQ92752 1358 aa18.45■□□□□ 0.54
PSMC6-207ENST00000554952 KDM5DQ9BY66 1539 aa18.45■□□□□ 0.54
PSMC6-207ENST00000554952 ABCC5O15440 1437 aa18.45■□□□□ 0.54
PSMC6-207ENST00000554952 MYO3AQ8NEV4 1616 aa18.45■□□□□ 0.54
PSMC6-207ENST00000554952 CEP170BQ9Y4F5 1589 aaPredicted RBP18.43■□□□□ 0.54
PSMC6-207ENST00000554952 PTPN23Q9H3S7 1636 aa18.43■□□□□ 0.54
PSMC6-207ENST00000554952 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
PSMC6-207ENST00000554952 PZPP20742 1482 aa18.43■□□□□ 0.54
PSMC6-207ENST00000554952 FGD6Q6ZV73 1430 aa18.42■□□□□ 0.54
PSMC6-207ENST00000554952 A2ML1A8K2U0 1454 aa18.42■□□□□ 0.54
PSMC6-207ENST00000554952 FAM135AQ9P2D6 1515 aa18.42■□□□□ 0.54
PSMC6-207ENST00000554952 CACNB1Q02641 598 aaPredicted RBP18.41■□□□□ 0.54
PSMC6-207ENST00000554952 KIF15Q9NS87 1388 aa18.41■□□□□ 0.54
PSMC6-207ENST00000554952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.54
PSMC6-207ENST00000554952 ZNF142P52746 1687 aaPredicted RBP18.4■□□□□ 0.54
PSMC6-207ENST00000554952 DAPK1P53355 1430 aa18.4■□□□□ 0.54
PSMC6-207ENST00000554952 PLA2R1Q13018 1463 aa18.39■□□□□ 0.54
PSMC6-207ENST00000554952 DUOX2Q9NRD8 1548 aa18.39■□□□□ 0.54
PSMC6-207ENST00000554952 FAM50AQ14320 339 aaKnown RBP18.39■□□□□ 0.53
PSMC6-207ENST00000554952 THEMISQ8N1K5 641 aaPredicted RBP18.39■□□□□ 0.53
PSMC6-207ENST00000554952 DNMT1P26358 1616 aaKnown RBP18.38■□□□□ 0.53
PSMC6-207ENST00000554952 ZNF335Q9H4Z2 1342 aaPredicted RBP18.37■□□□□ 0.53
PSMC6-207ENST00000554952 TCOF1Q13428 1488 aaKnown RBP18.37■□□□□ 0.53
PSMC6-207ENST00000554952 ABCC3O15438 1527 aa18.37■□□□□ 0.53
PSMC6-207ENST00000554952 RNF17Q9BXT8 1623 aaKnown RBP18.37■□□□□ 0.53
PSMC6-207ENST00000554952 ANKLE2Q86XL3 938 aa18.36■□□□□ 0.53
PSMC6-207ENST00000554952 EIF2AK4Q9P2K8 1649 aaKnown RBP18.36■□□□□ 0.53
PSMC6-207ENST00000554952 SHANK2Q9UPX8 1470 aa18.36■□□□□ 0.53
PSMC6-207ENST00000554952 CFAP65Q6ZU64 1925 aaKnown RBP18.35■□□□□ 0.53
PSMC6-207ENST00000554952 ANKRD30AQ9BXX3 1397 aa18.35■□□□□ 0.53
PSMC6-207ENST00000554952 LTBP4Q8N2S1 1624 aa18.34■□□□□ 0.53
PSMC6-207ENST00000554952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.34■□□□□ 0.53
PSMC6-207ENST00000554952 NLRP1Q9C000 1473 aa18.33■□□□□ 0.53
PSMC6-207ENST00000554952 ERBINQ96RT1 1412 aa18.33■□□□□ 0.53
PSMC6-207ENST00000554952 CROCC2H7BZ55 1655 aa18.32■□□□□ 0.52
PSMC6-207ENST00000554952 MROH1Q8NDA8 1641 aa18.31■□□□□ 0.52
PSMC6-207ENST00000554952 ZC3H13Q5T200 1668 aaKnown RBP18.31■□□□□ 0.52
PSMC6-207ENST00000554952 KANK1Q14678 1352 aa18.3■□□□□ 0.52
PSMC6-207ENST00000554952 UGGT1Q9NYU2 1555 aa18.3■□□□□ 0.52
PSMC6-207ENST00000554952 PPARGC1BQ86YN6 1023 aaKnown RBP18.3■□□□□ 0.52
PSMC6-207ENST00000554952 CEP152O94986 1710 aa18.29■□□□□ 0.52
PSMC6-207ENST00000554952 ERVK-7P63135 1459 aa18.29■□□□□ 0.52
PSMC6-207ENST00000554952 SPATA31D1Q6ZQQ2 1576 aa18.27■□□□□ 0.52
PSMC6-207ENST00000554952 UBAP1LF5GYI3 381 aa18.25■□□□□ 0.51
PSMC6-207ENST00000554952 ARHGAP31Q2M1Z3 1444 aa18.24■□□□□ 0.51
PSMC6-207ENST00000554952 PRDM15P57071 1507 aaPredicted RBP18.24■□□□□ 0.51
PSMC6-207ENST00000554952 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
PSMC6-207ENST00000554952 IQSEC2Q5JU85 1478 aa18.24■□□□□ 0.51
PSMC6-207ENST00000554952 NPHP4O75161 1426 aaPredicted RBP18.23■□□□□ 0.51
PSMC6-207ENST00000554952 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
PSMC6-207ENST00000554952 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
PSMC6-207ENST00000554952 NEURL4Q96JN8 1562 aa18.22■□□□□ 0.51
PSMC6-207ENST00000554952 ADGRL2O95490 1459 aa18.21■□□□□ 0.51
PSMC6-207ENST00000554952 ITGAEP38570 1179 aa18.21■□□□□ 0.51
PSMC6-207ENST00000554952 TXNDC2Q86VQ3 553 aa18.21■□□□□ 0.51
PSMC6-207ENST00000554952 ANKRD50Q9ULJ7 1429 aa18.21■□□□□ 0.51
PSMC6-207ENST00000554952 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
PSMC6-207ENST00000554952 MED14O60244 1454 aa18.2■□□□□ 0.5
PSMC6-207ENST00000554952 LTKP29376 864 aa18.19■□□□□ 0.5
PSMC6-207ENST00000554952 IDI1Q13907 227 aa18.19■□□□□ 0.5
PSMC6-207ENST00000554952 PPP4R3CPQ6ZMV5 832 aa18.18■□□□□ 0.5
PSMC6-207ENST00000554952 EID1Q9Y6B2 187 aa18.18■□□□□ 0.5
PSMC6-207ENST00000554952 UBR1Q8IWV7 1749 aa18.16■□□□□ 0.5
PSMC6-207ENST00000554952 LMTK2Q8IWU2 1503 aa18.16■□□□□ 0.5
PSMC6-207ENST00000554952 VWDEQ8N2E2 1590 aa18.16■□□□□ 0.5
PSMC6-207ENST00000554952 CPS1P31327 1500 aa18.14■□□□□ 0.49
PSMC6-207ENST00000554952 IQGAP1P46940 1657 aa18.13■□□□□ 0.49
PSMC6-207ENST00000554952 TOM1O60784 492 aa18.13■□□□□ 0.49
PSMC6-207ENST00000554952 PIP4K2BP78356 416 aa18.13■□□□□ 0.49
PSMC6-207ENST00000554952 SCAF11Q99590 1463 aaKnown RBP18.13■□□□□ 0.49
PSMC6-207ENST00000554952 SLC52A1Q9NWF4 448 aa18.12■□□□□ 0.49
PSMC6-207ENST00000554952 ROCK1Q13464 1354 aa18.12■□□□□ 0.49
PSMC6-207ENST00000554952 TMEM2Q9UHN6 1383 aa18.12■□□□□ 0.49
PSMC6-207ENST00000554952 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
PSMC6-207ENST00000554952 ARHGAP23Q9P227 1491 aa18.11■□□□□ 0.49
PSMC6-207ENST00000554952 PIK3C2BO00750 1634 aa18.11■□□□□ 0.49
PSMC6-207ENST00000554952 SLIT1O75093 1534 aa18.1■□□□□ 0.49
PSMC6-207ENST00000554952 NOS1P29475 1434 aa18.1■□□□□ 0.49
PSMC6-207ENST00000554952 EFCAB6Q5THR3 1501 aa18.09■□□□□ 0.49
PSMC6-207ENST00000554952 DISP3Q9P2K9 1392 aa18.08■□□□□ 0.49
PSMC6-207ENST00000554952 BCANQ96GW7 911 aa18.07■□□□□ 0.48
PSMC6-207ENST00000554952 SYNMO15061 1565 aa18.07■□□□□ 0.48
PSMC6-207ENST00000554952 NUP155O75694 1391 aa18.06■□□□□ 0.48
PSMC6-207ENST00000554952 RPRD2Q5VT52 1461 aaKnown RBP18.06■□□□□ 0.48
PSMC6-207ENST00000554952 CHGAP10645 457 aaKnown RBP18.05■□□□□ 0.48
PSMC6-207ENST00000554952 SLC26A8Q96RN1 970 aa18.05■□□□□ 0.48
PSMC6-207ENST00000554952 HSPA1LP34931 641 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms