RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 VPS8Q8N3P4 1428 aa29■■■□□ 2.23
PRKCH-210ENST00000554835 A2ML1A8K2U0 1454 aa28.99■■■□□ 2.23
PRKCH-210ENST00000554835 DNMT1P26358 1616 aaKnown RBP28.99■■■□□ 2.23
PRKCH-210ENST00000554835 FBXO31Q5XUX0 539 aaPredicted RBP28.99■■■□□ 2.23
PRKCH-210ENST00000554835 KDM5DQ9BY66 1539 aa28.96■■■□□ 2.23
PRKCH-210ENST00000554835 PZPP20742 1482 aa28.95■■■□□ 2.22
PRKCH-210ENST00000554835 KANK4Q5T7N3 995 aaPredicted RBP28.94■■■□□ 2.22
PRKCH-210ENST00000554835 FAM135AQ9P2D6 1515 aa28.94■■■□□ 2.22
PRKCH-210ENST00000554835 TNRQ92752 1358 aa28.93■■■□□ 2.22
PRKCH-210ENST00000554835 WASHC2CQ9Y4E1 1318 aa28.92■■■□□ 2.22
PRKCH-210ENST00000554835 TSPY4P0CV99 314 aa28.9■■■□□ 2.22
PRKCH-210ENST00000554835 TSPY10P0CW01 314 aa28.9■■■□□ 2.22
PRKCH-210ENST00000554835 DISP3Q9P2K9 1392 aa28.88■■■□□ 2.21
PRKCH-210ENST00000554835 NEURL4Q96JN8 1562 aa28.87■■■□□ 2.21
PRKCH-210ENST00000554835 MAST1Q9Y2H9 1570 aa28.87■■■□□ 2.21
PRKCH-210ENST00000554835 MAP3K1Q13233 1512 aa28.86■■■□□ 2.21
PRKCH-210ENST00000554835 RNF17Q9BXT8 1623 aaKnown RBP28.84■■■□□ 2.21
PRKCH-210ENST00000554835 ILDR2Q71H61 639 aa28.84■■■□□ 2.21
PRKCH-210ENST00000554835 MIA2Q96PC5 1412 aa28.84■■■□□ 2.21
PRKCH-210ENST00000554835 POLR1AO95602 1720 aaPredicted RBP28.83■■■□□ 2.21
PRKCH-210ENST00000554835 MYOM3Q5VTT5 1437 aa28.81■■■□□ 2.2
PRKCH-210ENST00000554835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.8■■■□□ 2.2
PRKCH-210ENST00000554835 UBAP1LF5GYI3 381 aa28.8■■■□□ 2.2
PRKCH-210ENST00000554835 ABCC3O15438 1527 aa28.79■■■□□ 2.2
PRKCH-210ENST00000554835 NLRP1Q9C000 1473 aa28.78■■■□□ 2.2
PRKCH-210ENST00000554835 MROH1Q8NDA8 1641 aa28.78■■■□□ 2.2
PRKCH-210ENST00000554835 EIF2AK4Q9P2K8 1649 aaKnown RBP28.76■■■□□ 2.2
PRKCH-210ENST00000554835 UGGT1Q9NYU2 1555 aa28.76■■■□□ 2.19
PRKCH-210ENST00000554835 SPATA31D1Q6ZQQ2 1576 aa28.75■■■□□ 2.19
PRKCH-210ENST00000554835 THEMISQ8N1K5 641 aaPredicted RBP28.74■■■□□ 2.19
PRKCH-210ENST00000554835 ZC3H13Q5T200 1668 aaKnown RBP28.74■■■□□ 2.19
PRKCH-210ENST00000554835 ANKLE2Q86XL3 938 aa28.73■■■□□ 2.19
PRKCH-210ENST00000554835 SHANK2Q9UPX8 1470 aa28.72■■■□□ 2.19
PRKCH-210ENST00000554835 MED14O60244 1454 aa28.7■■■□□ 2.18
PRKCH-210ENST00000554835 ERVK-7P63135 1459 aa28.7■■■□□ 2.18
PRKCH-210ENST00000554835 VWDEQ8N2E2 1590 aa28.7■■■□□ 2.18
PRKCH-210ENST00000554835 CEP152O94986 1710 aa28.69■■■□□ 2.18
PRKCH-210ENST00000554835 DEPDC5O75140 1603 aa28.69■■■□□ 2.18
PRKCH-210ENST00000554835 CPS1P31327 1500 aa28.68■■■□□ 2.18
PRKCH-210ENST00000554835 DUOX2Q9NRD8 1548 aa28.68■■■□□ 2.18
PRKCH-210ENST00000554835 ABCC5O15440 1437 aa28.67■■■□□ 2.18
PRKCH-210ENST00000554835 NPHP4O75161 1426 aaPredicted RBP28.67■■■□□ 2.18
PRKCH-210ENST00000554835 CFAP65Q6ZU64 1925 aaKnown RBP28.66■■■□□ 2.18
PRKCH-210ENST00000554835 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.18
PRKCH-210ENST00000554835 PTPN23Q9H3S7 1636 aa28.63■■■□□ 2.17
PRKCH-210ENST00000554835 KIF15Q9NS87 1388 aa28.62■■■□□ 2.17
PRKCH-210ENST00000554835 IQGAP1P46940 1657 aa28.62■■■□□ 2.17
PRKCH-210ENST00000554835 RRP7BPQ9NSQ0 103 aa28.6■■■□□ 2.17
PRKCH-210ENST00000554835 PRDM15P57071 1507 aaPredicted RBP28.59■■■□□ 2.17
PRKCH-210ENST00000554835 SOCS7O14512 581 aa28.59■■■□□ 2.17
PRKCH-210ENST00000554835 UBR1Q8IWV7 1749 aa28.58■■■□□ 2.17
PRKCH-210ENST00000554835 STRCP1A6NGW2 1772 aa28.58■■■□□ 2.17
PRKCH-210ENST00000554835 ERBINQ96RT1 1412 aa28.58■■■□□ 2.17
PRKCH-210ENST00000554835 DAPK1P53355 1430 aa28.57■■■□□ 2.16
PRKCH-210ENST00000554835 PIP4K2BP78356 416 aa28.56■■■□□ 2.16
PRKCH-210ENST00000554835 ALKQ9UM73 1620 aa28.56■■■□□ 2.16
PRKCH-210ENST00000554835 ARHGAP31Q2M1Z3 1444 aa28.55■■■□□ 2.16
PRKCH-210ENST00000554835 FGD6Q6ZV73 1430 aa28.55■■■□□ 2.16
PRKCH-210ENST00000554835 HSPA1LP34931 641 aa28.55■■■□□ 2.16
PRKCH-210ENST00000554835 TOM1O60784 492 aa28.54■■■□□ 2.16
PRKCH-210ENST00000554835 SCAF1Q9H7N4 1312 aaKnown RBP28.53■■■□□ 2.16
PRKCH-210ENST00000554835 APLP2Q06481 763 aa28.53■■■□□ 2.16
PRKCH-210ENST00000554835 LTKP29376 864 aa28.5■■■□□ 2.15
PRKCH-210ENST00000554835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.5■■■□□ 2.15
PRKCH-210ENST00000554835 ARHGAP23Q9P227 1491 aa28.5■■■□□ 2.15
PRKCH-210ENST00000554835 LRRC7Q96NW7 1537 aa28.48■■■□□ 2.15
PRKCH-210ENST00000554835 SCAF11Q99590 1463 aaKnown RBP28.48■■■□□ 2.15
PRKCH-210ENST00000554835 CHIC2Q9UKJ5 165 aa28.48■■■□□ 2.15
PRKCH-210ENST00000554835 SLIT1O75093 1534 aa28.48■■■□□ 2.15
PRKCH-210ENST00000554835 PIK3C2BO00750 1634 aa28.44■■■□□ 2.14
PRKCH-210ENST00000554835 TXNDC2Q86VQ3 553 aa28.43■■■□□ 2.14
PRKCH-210ENST00000554835 ANKRD30AQ9BXX3 1397 aa28.42■■■□□ 2.14
PRKCH-210ENST00000554835 SYNMO15061 1565 aa28.41■■■□□ 2.14
PRKCH-210ENST00000554835 LMTK2Q8IWU2 1503 aa28.41■■■□□ 2.14
PRKCH-210ENST00000554835 KANK1Q14678 1352 aa28.39■■■□□ 2.14
PRKCH-210ENST00000554835 MED1Q15648 1581 aaPredicted RBP28.39■■■□□ 2.14
PRKCH-210ENST00000554835 TMEM2Q9UHN6 1383 aa28.37■■■□□ 2.13
PRKCH-210ENST00000554835 IDI1Q13907 227 aa28.36■■■□□ 2.13
PRKCH-210ENST00000554835 ADGRL2O95490 1459 aa28.35■■■□□ 2.13
PRKCH-210ENST00000554835 XIRP1Q702N8 1843 aaKnown RBP28.34■■■□□ 2.13
PRKCH-210ENST00000554835 EID1Q9Y6B2 187 aa28.33■■■□□ 2.13
PRKCH-210ENST00000554835 NOS1P29475 1434 aa28.33■■■□□ 2.13
PRKCH-210ENST00000554835 KDM5AP29375 1690 aaKnown RBP28.32■■■□□ 2.12
PRKCH-210ENST00000554835 EFCAB6Q5THR3 1501 aa28.32■■■□□ 2.12
PRKCH-210ENST00000554835 FAM50AQ14320 339 aaKnown RBP28.29■■■□□ 2.12
PRKCH-210ENST00000554835 STAG3Q9UJ98 1225 aa28.29■■■□□ 2.12
PRKCH-210ENST00000554835 SENP3Q9H4L4 574 aaPredicted RBP28.27■■■□□ 2.12
PRKCH-210ENST00000554835 TET3O43151 1660 aa28.26■■■□□ 2.11
PRKCH-210ENST00000554835 ANKRD50Q9ULJ7 1429 aa28.25■■■□□ 2.11
PRKCH-210ENST00000554835 ADGRB3O60242 1522 aa28.23■■■□□ 2.11
PRKCH-210ENST00000554835 SLC26A8Q96RN1 970 aa28.21■■■□□ 2.11
PRKCH-210ENST00000554835 SLC52A1Q9NWF4 448 aa28.2■■■□□ 2.1
PRKCH-210ENST00000554835 RPRD2Q5VT52 1461 aaKnown RBP28.19■■■□□ 2.1
PRKCH-210ENST00000554835 TMEM94Q12767 1356 aa28.18■■■□□ 2.1
PRKCH-210ENST00000554835 KCNA6P17658 529 aa28.17■■■□□ 2.1
PRKCH-210ENST00000554835 MYO5BQ9ULV0 1848 aa28.15■■■□□ 2.1
PRKCH-210ENST00000554835 RBM33Q96EV2 1170 aaKnown RBP28.14■■■□□ 2.1
PRKCH-210ENST00000554835 ZFYVE9O95405 1425 aa28.14■■■□□ 2.1
PRKCH-210ENST00000554835 UNC13BO14795 1591 aa28.12■■■□□ 2.09
PRKCH-210ENST00000554835 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms