RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 TSPY4P0CV99 314 aa24.64■■□□□ 1.54
GABRB3-207ENST00000554722 TSPY10P0CW01 314 aa24.64■■□□□ 1.54
GABRB3-207ENST00000554722 PKD2Q13563 968 aa24.64■■□□□ 1.54
GABRB3-207ENST00000554722 PLA2R1Q13018 1463 aa24.64■■□□□ 1.53
GABRB3-207ENST00000554722 ZNF142P52746 1687 aaPredicted RBP24.63■■□□□ 1.53
GABRB3-207ENST00000554722 CEP170BQ9Y4F5 1589 aaPredicted RBP24.63■■□□□ 1.53
GABRB3-207ENST00000554722 LTBP4Q8N2S1 1624 aa24.62■■□□□ 1.53
GABRB3-207ENST00000554722 CROCC2H7BZ55 1655 aa24.62■■□□□ 1.53
GABRB3-207ENST00000554722 IQSEC2Q5JU85 1478 aa24.59■■□□□ 1.53
GABRB3-207ENST00000554722 FAM135AQ9P2D6 1515 aa24.59■■□□□ 1.53
GABRB3-207ENST00000554722 WASHC2CQ9Y4E1 1318 aa24.58■■□□□ 1.52
GABRB3-207ENST00000554722 A2ML1A8K2U0 1454 aa24.58■■□□□ 1.52
GABRB3-207ENST00000554722 TCOF1Q13428 1488 aaKnown RBP24.58■■□□□ 1.52
GABRB3-207ENST00000554722 FGD6Q6ZV73 1430 aa24.57■■□□□ 1.52
GABRB3-207ENST00000554722 KDM5DQ9BY66 1539 aa24.56■■□□□ 1.52
GABRB3-207ENST00000554722 ABCC5O15440 1437 aa24.56■■□□□ 1.52
GABRB3-207ENST00000554722 TNRQ92752 1358 aa24.55■■□□□ 1.52
GABRB3-207ENST00000554722 DNMT1P26358 1616 aaKnown RBP24.55■■□□□ 1.52
GABRB3-207ENST00000554722 RNF17Q9BXT8 1623 aaKnown RBP24.54■■□□□ 1.52
GABRB3-207ENST00000554722 PZPP20742 1482 aa24.54■■□□□ 1.52
GABRB3-207ENST00000554722 ZNF335Q9H4Z2 1342 aaPredicted RBP24.54■■□□□ 1.52
GABRB3-207ENST00000554722 FBXO31Q5XUX0 539 aaPredicted RBP24.53■■□□□ 1.52
GABRB3-207ENST00000554722 EIF2AK4Q9P2K8 1649 aaKnown RBP24.52■■□□□ 1.52
GABRB3-207ENST00000554722 MROH1Q8NDA8 1641 aa24.51■■□□□ 1.51
GABRB3-207ENST00000554722 DAPK1P53355 1430 aa24.51■■□□□ 1.51
GABRB3-207ENST00000554722 CFAP65Q6ZU64 1925 aaKnown RBP24.49■■□□□ 1.51
GABRB3-207ENST00000554722 SHANK2Q9UPX8 1470 aa24.49■■□□□ 1.51
GABRB3-207ENST00000554722 CEP152O94986 1710 aa24.49■■□□□ 1.51
GABRB3-207ENST00000554722 DUOX2Q9NRD8 1548 aa24.48■■□□□ 1.51
GABRB3-207ENST00000554722 ZC3H13Q5T200 1668 aaKnown RBP24.44■■□□□ 1.5
GABRB3-207ENST00000554722 RRP7BPQ9NSQ0 103 aa24.44■■□□□ 1.5
GABRB3-207ENST00000554722 ABCC3O15438 1527 aa24.44■■□□□ 1.5
GABRB3-207ENST00000554722 NLRP1Q9C000 1473 aa24.44■■□□□ 1.5
GABRB3-207ENST00000554722 KIF15Q9NS87 1388 aa24.43■■□□□ 1.5
GABRB3-207ENST00000554722 DISP3Q9P2K9 1392 aa24.43■■□□□ 1.5
GABRB3-207ENST00000554722 THEMISQ8N1K5 641 aaPredicted RBP24.43■■□□□ 1.5
GABRB3-207ENST00000554722 CHIC2Q9UKJ5 165 aa24.43■■□□□ 1.5
GABRB3-207ENST00000554722 UBAP1LF5GYI3 381 aa24.42■■□□□ 1.5
GABRB3-207ENST00000554722 ANKLE2Q86XL3 938 aa24.41■■□□□ 1.5
GABRB3-207ENST00000554722 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.4■■□□□ 1.5
GABRB3-207ENST00000554722 UGGT1Q9NYU2 1555 aa24.37■■□□□ 1.49
GABRB3-207ENST00000554722 DEPDC5O75140 1603 aa24.37■■□□□ 1.49
GABRB3-207ENST00000554722 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
GABRB3-207ENST00000554722 PPARGC1BQ86YN6 1023 aaKnown RBP24.37■■□□□ 1.49
GABRB3-207ENST00000554722 ERBINQ96RT1 1412 aa24.36■■□□□ 1.49
GABRB3-207ENST00000554722 POLR1AO95602 1720 aaPredicted RBP24.36■■□□□ 1.49
GABRB3-207ENST00000554722 NEURL4Q96JN8 1562 aa24.36■■□□□ 1.49
GABRB3-207ENST00000554722 PRDM15P57071 1507 aaPredicted RBP24.35■■□□□ 1.49
GABRB3-207ENST00000554722 SPATA31D1Q6ZQQ2 1576 aa24.33■■□□□ 1.49
GABRB3-207ENST00000554722 ADGRL2O95490 1459 aa24.32■■□□□ 1.48
GABRB3-207ENST00000554722 ANKRD30AQ9BXX3 1397 aa24.32■■□□□ 1.48
GABRB3-207ENST00000554722 ERVK-7P63135 1459 aa24.32■■□□□ 1.48
GABRB3-207ENST00000554722 CPS1P31327 1500 aa24.31■■□□□ 1.48
GABRB3-207ENST00000554722 NPHP4O75161 1426 aaPredicted RBP24.31■■□□□ 1.48
GABRB3-207ENST00000554722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.3■■□□□ 1.48
GABRB3-207ENST00000554722 MED14O60244 1454 aa24.3■■□□□ 1.48
GABRB3-207ENST00000554722 VWDEQ8N2E2 1590 aa24.26■■□□□ 1.47
GABRB3-207ENST00000554722 ILDR2Q71H61 639 aa24.26■■□□□ 1.47
GABRB3-207ENST00000554722 TOM1O60784 492 aa24.25■■□□□ 1.47
GABRB3-207ENST00000554722 ARHGAP31Q2M1Z3 1444 aa24.24■■□□□ 1.47
GABRB3-207ENST00000554722 SCAF1Q9H7N4 1312 aaKnown RBP24.23■■□□□ 1.47
GABRB3-207ENST00000554722 UBR1Q8IWV7 1749 aa24.23■■□□□ 1.47
GABRB3-207ENST00000554722 KANK1Q14678 1352 aa24.21■■□□□ 1.47
GABRB3-207ENST00000554722 IQGAP1P46940 1657 aa24.21■■□□□ 1.47
GABRB3-207ENST00000554722 PIP4K2BP78356 416 aa24.2■■□□□ 1.46
GABRB3-207ENST00000554722 LMTK2Q8IWU2 1503 aa24.2■■□□□ 1.46
GABRB3-207ENST00000554722 ANKRD50Q9ULJ7 1429 aa24.19■■□□□ 1.46
GABRB3-207ENST00000554722 SOCS7O14512 581 aa24.17■■□□□ 1.46
GABRB3-207ENST00000554722 SCAF11Q99590 1463 aaKnown RBP24.15■■□□□ 1.46
GABRB3-207ENST00000554722 PIK3C2BO00750 1634 aa24.15■■□□□ 1.46
GABRB3-207ENST00000554722 EFCAB6Q5THR3 1501 aa24.14■■□□□ 1.45
GABRB3-207ENST00000554722 SYNMO15061 1565 aa24.13■■□□□ 1.45
GABRB3-207ENST00000554722 HSPA1LP34931 641 aa24.13■■□□□ 1.45
GABRB3-207ENST00000554722 ITGAEP38570 1179 aa24.13■■□□□ 1.45
GABRB3-207ENST00000554722 TXNDC2Q86VQ3 553 aa24.13■■□□□ 1.45
GABRB3-207ENST00000554722 EID1Q9Y6B2 187 aa24.13■■□□□ 1.45
GABRB3-207ENST00000554722 ARHGAP23Q9P227 1491 aa24.13■■□□□ 1.45
GABRB3-207ENST00000554722 SLIT1O75093 1534 aa24.12■■□□□ 1.45
GABRB3-207ENST00000554722 UNC13BO14795 1591 aa24.12■■□□□ 1.45
GABRB3-207ENST00000554722 LTKP29376 864 aa24.11■■□□□ 1.45
GABRB3-207ENST00000554722 STAG3Q9UJ98 1225 aa24.11■■□□□ 1.45
GABRB3-207ENST00000554722 ROCK1Q13464 1354 aa24.1■■□□□ 1.45
GABRB3-207ENST00000554722 TET3O43151 1660 aa24.09■■□□□ 1.45
GABRB3-207ENST00000554722 LRRC7Q96NW7 1537 aa24.09■■□□□ 1.45
GABRB3-207ENST00000554722 STRCP1A6NGW2 1772 aa24.08■■□□□ 1.44
GABRB3-207ENST00000554722 GCC2Q8IWJ2 1684 aa24.08■■□□□ 1.44
GABRB3-207ENST00000554722 NOS1P29475 1434 aa24.07■■□□□ 1.44
GABRB3-207ENST00000554722 MYO5BQ9ULV0 1848 aa24.07■■□□□ 1.44
GABRB3-207ENST00000554722 TMEM2Q9UHN6 1383 aa24.06■■□□□ 1.44
GABRB3-207ENST00000554722 RRBP1Q9P2E9 1410 aaKnown RBP24.05■■□□□ 1.44
GABRB3-207ENST00000554722 IDI1Q13907 227 aa24.05■■□□□ 1.44
GABRB3-207ENST00000554722 E9PCH4 1651 aa24.05■■□□□ 1.44
GABRB3-207ENST00000554722 KDM5AP29375 1690 aaKnown RBP24.04■■□□□ 1.44
GABRB3-207ENST00000554722 IQGAP3Q86VI3 1631 aa24.02■■□□□ 1.44
GABRB3-207ENST00000554722 ALKQ9UM73 1620 aa24.02■■□□□ 1.44
GABRB3-207ENST00000554722 RPRD2Q5VT52 1461 aaKnown RBP24■■□□□ 1.43
GABRB3-207ENST00000554722 SLC52A1Q9NWF4 448 aa23.99■■□□□ 1.43
GABRB3-207ENST00000554722 ADGRB3O60242 1522 aa23.97■■□□□ 1.43
GABRB3-207ENST00000554722 MED1Q15648 1581 aaPredicted RBP23.97■■□□□ 1.43
GABRB3-207ENST00000554722 NUP155O75694 1391 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms