RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 FAM135AQ9P2D6 1515 aa38.64■■■■□ 3.78
FOXA1-204ENST00000554607 UBAP1LF5GYI3 381 aa38.64■■■■□ 3.78
FOXA1-204ENST00000554607 DNMT1P26358 1616 aaKnown RBP38.63■■■■□ 3.77
FOXA1-204ENST00000554607 TNRQ92752 1358 aa38.62■■■■□ 3.77
FOXA1-204ENST00000554607 WASHC2CQ9Y4E1 1318 aa38.62■■■■□ 3.77
FOXA1-204ENST00000554607 SPATA31D1Q6ZQQ2 1576 aa38.61■■■■□ 3.77
FOXA1-204ENST00000554607 TSPY4P0CV99 314 aa38.61■■■■□ 3.77
FOXA1-204ENST00000554607 TSPY10P0CW01 314 aa38.61■■■■□ 3.77
FOXA1-204ENST00000554607 KDM5DQ9BY66 1539 aa38.6■■■■□ 3.77
FOXA1-204ENST00000554607 FBXO31Q5XUX0 539 aaPredicted RBP38.6■■■■□ 3.77
FOXA1-204ENST00000554607 PZPP20742 1482 aa38.59■■■■□ 3.77
FOXA1-204ENST00000554607 SOCS7O14512 581 aa38.58■■■■□ 3.77
FOXA1-204ENST00000554607 ARHGEF5Q12774 1597 aa38.53■■■■□ 3.76
FOXA1-204ENST00000554607 THEMISQ8N1K5 641 aaPredicted RBP38.49■■■■□ 3.75
FOXA1-204ENST00000554607 ANKLE2Q86XL3 938 aa38.48■■■■□ 3.75
FOXA1-204ENST00000554607 MIA2Q96PC5 1412 aa38.47■■■■□ 3.75
FOXA1-204ENST00000554607 POLR1AO95602 1720 aaPredicted RBP38.46■■■■□ 3.75
FOXA1-204ENST00000554607 NLRP1Q9C000 1473 aa38.45■■■■□ 3.75
FOXA1-204ENST00000554607 LRRC9Q6ZRR7 1453 aa38.43■■■■□ 3.74
FOXA1-204ENST00000554607 CPS1P31327 1500 aa38.42■■■■□ 3.74
FOXA1-204ENST00000554607 NEURL4Q96JN8 1562 aa38.41■■■■□ 3.74
FOXA1-204ENST00000554607 VPS8Q8N3P4 1428 aa38.41■■■■□ 3.74
FOXA1-204ENST00000554607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.41■■■■□ 3.74
FOXA1-204ENST00000554607 SHANK2Q9UPX8 1470 aa38.39■■■■□ 3.74
FOXA1-204ENST00000554607 UGGT1Q9NYU2 1555 aa38.37■■■■□ 3.73
FOXA1-204ENST00000554607 TOM1O60784 492 aa38.37■■■■□ 3.73
FOXA1-204ENST00000554607 MAST1Q9Y2H9 1570 aa38.35■■■■□ 3.73
FOXA1-204ENST00000554607 RNF17Q9BXT8 1623 aaKnown RBP38.33■■■■□ 3.73
FOXA1-204ENST00000554607 MED14O60244 1454 aa38.31■■■■□ 3.72
FOXA1-204ENST00000554607 SCAF1Q9H7N4 1312 aaKnown RBP38.31■■■■□ 3.72
FOXA1-204ENST00000554607 NPHP4O75161 1426 aaPredicted RBP38.3■■■■□ 3.72
FOXA1-204ENST00000554607 DEPDC5O75140 1603 aa38.3■■■■□ 3.72
FOXA1-204ENST00000554607 MAP3K1Q13233 1512 aa38.29■■■■□ 3.72
FOXA1-204ENST00000554607 ZC3H13Q5T200 1668 aaKnown RBP38.29■■■■□ 3.72
FOXA1-204ENST00000554607 ABCC3O15438 1527 aa38.28■■■■□ 3.72
FOXA1-204ENST00000554607 PIP4K2BP78356 416 aa38.28■■■■□ 3.72
FOXA1-204ENST00000554607 EIF2AK4Q9P2K8 1649 aaKnown RBP38.27■■■■□ 3.72
FOXA1-204ENST00000554607 LOC105371045A0A1W2PR82 267 aa38.26■■■■□ 3.72
FOXA1-204ENST00000554607 KANK4Q5T7N3 995 aaPredicted RBP38.26■■■■□ 3.72
FOXA1-204ENST00000554607 VWDEQ8N2E2 1590 aa38.24■■■■□ 3.71
FOXA1-204ENST00000554607 MYOM3Q5VTT5 1437 aa38.24■■■■□ 3.71
FOXA1-204ENST00000554607 HSPA1LP34931 641 aa38.23■■■■□ 3.71
FOXA1-204ENST00000554607 ERVK-7P63135 1459 aa38.2■■■■□ 3.71
FOXA1-204ENST00000554607 DUOX2Q9NRD8 1548 aa38.17■■■■□ 3.7
FOXA1-204ENST00000554607 IQGAP1P46940 1657 aa38.17■■■■□ 3.7
FOXA1-204ENST00000554607 MROH1Q8NDA8 1641 aa38.14■■■■□ 3.7
FOXA1-204ENST00000554607 CEP152O94986 1710 aa38.08■■■■□ 3.69
FOXA1-204ENST00000554607 KIF15Q9NS87 1388 aa38.06■■■■□ 3.68
FOXA1-204ENST00000554607 CFAP65Q6ZU64 1925 aaKnown RBP38.06■■■■□ 3.68
FOXA1-204ENST00000554607 ARHGAP31Q2M1Z3 1444 aa38.04■■■■□ 3.68
FOXA1-204ENST00000554607 APLP2Q06481 763 aa38.04■■■■□ 3.68
FOXA1-204ENST00000554607 UBR1Q8IWV7 1749 aa38.03■■■■□ 3.68
FOXA1-204ENST00000554607 ERBINQ96RT1 1412 aa38.03■■■■□ 3.68
FOXA1-204ENST00000554607 RRP7BPQ9NSQ0 103 aa38.02■■■■□ 3.68
FOXA1-204ENST00000554607 LRRC7Q96NW7 1537 aa38.02■■■■□ 3.68
FOXA1-204ENST00000554607 MED1Q15648 1581 aaPredicted RBP38.02■■■■□ 3.68
FOXA1-204ENST00000554607 ABCC5O15440 1437 aa38.01■■■■□ 3.68
FOXA1-204ENST00000554607 SCAF11Q99590 1463 aaKnown RBP38.01■■■■□ 3.67
FOXA1-204ENST00000554607 PRDM15P57071 1507 aaPredicted RBP37.99■■■■□ 3.67
FOXA1-204ENST00000554607 TXNDC2Q86VQ3 553 aa37.99■■■■□ 3.67
FOXA1-204ENST00000554607 ALKQ9UM73 1620 aa37.98■■■■□ 3.67
FOXA1-204ENST00000554607 STRCP1A6NGW2 1772 aa37.98■■■■□ 3.67
FOXA1-204ENST00000554607 SYNMO15061 1565 aa37.97■■■■□ 3.67
FOXA1-204ENST00000554607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.96■■■■□ 3.67
FOXA1-204ENST00000554607 EID1Q9Y6B2 187 aa37.96■■■■□ 3.67
FOXA1-204ENST00000554607 ARHGAP23Q9P227 1491 aa37.96■■■■□ 3.67
FOXA1-204ENST00000554607 PTPN23Q9H3S7 1636 aa37.95■■■■□ 3.67
FOXA1-204ENST00000554607 LTKP29376 864 aa37.95■■■■□ 3.67
FOXA1-204ENST00000554607 SLIT1O75093 1534 aa37.95■■■■□ 3.67
FOXA1-204ENST00000554607 CROCC2H7BZ55 1655 aa37.95■■■■□ 3.66
FOXA1-204ENST00000554607 KANK1Q14678 1352 aa37.94■■■■□ 3.66
FOXA1-204ENST00000554607 DAPK1P53355 1430 aa37.91■■■■□ 3.66
FOXA1-204ENST00000554607 STAG3Q9UJ98 1225 aa37.88■■■■□ 3.65
FOXA1-204ENST00000554607 PHF23Q9BUL5 403 aaPredicted RBP37.87■■■■□ 3.65
FOXA1-204ENST00000554607 ANKRD30AQ9BXX3 1397 aa37.86■■■■□ 3.65
FOXA1-204ENST00000554607 FGD6Q6ZV73 1430 aa37.86■■■■□ 3.65
FOXA1-204ENST00000554607 TMEM2Q9UHN6 1383 aa37.83■■■■□ 3.65
FOXA1-204ENST00000554607 PIK3C2BO00750 1634 aa37.81■■■■□ 3.64
FOXA1-204ENST00000554607 CHIC2Q9UKJ5 165 aa37.8■■■■□ 3.64
FOXA1-204ENST00000554607 LMTK2Q8IWU2 1503 aa37.79■■■■□ 3.64
FOXA1-204ENST00000554607 SENP3Q9H4L4 574 aaPredicted RBP37.79■■■■□ 3.64
FOXA1-204ENST00000554607 IDI1Q13907 227 aa37.77■■■■□ 3.64
FOXA1-204ENST00000554607 KDM5AP29375 1690 aaKnown RBP37.76■■■■□ 3.63
FOXA1-204ENST00000554607 EFCAB6Q5THR3 1501 aa37.74■■■■□ 3.63
FOXA1-204ENST00000554607 KCNA6P17658 529 aa37.67■■■■□ 3.62
FOXA1-204ENST00000554607 XIRP1Q702N8 1843 aaKnown RBP37.66■■■■□ 3.62
FOXA1-204ENST00000554607 SLC52A1Q9NWF4 448 aa37.66■■■■□ 3.62
FOXA1-204ENST00000554607 NOS1P29475 1434 aa37.66■■■■□ 3.62
FOXA1-204ENST00000554607 ADGRL2O95490 1459 aa37.63■■■■□ 3.61
FOXA1-204ENST00000554607 FAM135BQ49AJ0 1406 aa37.62■■■■□ 3.61
FOXA1-204ENST00000554607 TMEM94Q12767 1356 aa37.62■■■■□ 3.61
FOXA1-204ENST00000554607 SLC26A8Q96RN1 970 aa37.61■■■■□ 3.61
FOXA1-204ENST00000554607 TET3O43151 1660 aa37.6■■■■□ 3.61
FOXA1-204ENST00000554607 PROSER2Q86WR7 435 aaPredicted RBP37.59■■■■□ 3.61
FOXA1-204ENST00000554607 ADGRB3O60242 1522 aa37.58■■■■□ 3.61
FOXA1-204ENST00000554607 FAM50AQ14320 339 aaKnown RBP37.57■■■■□ 3.6
FOXA1-204ENST00000554607 RPRD2Q5VT52 1461 aaKnown RBP37.55■■■■□ 3.6
FOXA1-204ENST00000554607 ANKRD50Q9ULJ7 1429 aa37.54■■■■□ 3.6
FOXA1-204ENST00000554607 BCANQ96GW7 911 aa37.54■■■■□ 3.6
FOXA1-204ENST00000554607 HDGFP51858 240 aaKnown RBP37.51■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms