RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 LRRC9Q6ZRR7 1453 aa35.27■■■■□ 3.24
GABRB3-206ENST00000554556 FAM135AQ9P2D6 1515 aa35.26■■■■□ 3.23
GABRB3-206ENST00000554556 A2ML1A8K2U0 1454 aa35.24■■■■□ 3.23
GABRB3-206ENST00000554556 WASHC2CQ9Y4E1 1318 aa35.24■■■■□ 3.23
GABRB3-206ENST00000554556 TCOF1Q13428 1488 aaKnown RBP35.23■■■■□ 3.23
GABRB3-206ENST00000554556 KDM5DQ9BY66 1539 aa35.22■■■■□ 3.23
GABRB3-206ENST00000554556 TNRQ92752 1358 aa35.19■■■■□ 3.22
GABRB3-206ENST00000554556 DNMT1P26358 1616 aaKnown RBP35.18■■■■□ 3.22
GABRB3-206ENST00000554556 MAP3K1Q13233 1512 aa35.18■■■■□ 3.22
GABRB3-206ENST00000554556 PZPP20742 1482 aa35.18■■■■□ 3.22
GABRB3-206ENST00000554556 ZNF335Q9H4Z2 1342 aaPredicted RBP35.18■■■■□ 3.22
GABRB3-206ENST00000554556 FBXO31Q5XUX0 539 aaPredicted RBP35.18■■■■□ 3.22
GABRB3-206ENST00000554556 KANK4Q5T7N3 995 aaPredicted RBP35.13■■■■□ 3.21
GABRB3-206ENST00000554556 MAST1Q9Y2H9 1570 aa35.11■■■■□ 3.21
GABRB3-206ENST00000554556 MIA2Q96PC5 1412 aa35.1■■■■□ 3.21
GABRB3-206ENST00000554556 MYOM3Q5VTT5 1437 aa35.07■■■■□ 3.21
GABRB3-206ENST00000554556 DISP3Q9P2K9 1392 aa35.07■■■■□ 3.2
GABRB3-206ENST00000554556 THEMISQ8N1K5 641 aaPredicted RBP35.06■■■■□ 3.2
GABRB3-206ENST00000554556 POLR1AO95602 1720 aaPredicted RBP35.05■■■■□ 3.2
GABRB3-206ENST00000554556 NLRP1Q9C000 1473 aa35.04■■■■□ 3.2
GABRB3-206ENST00000554556 UBAP1LF5GYI3 381 aa35.03■■■■□ 3.2
GABRB3-206ENST00000554556 ANKLE2Q86XL3 938 aa35.03■■■■□ 3.2
GABRB3-206ENST00000554556 RNF17Q9BXT8 1623 aaKnown RBP35.03■■■■□ 3.2
GABRB3-206ENST00000554556 APLP2Q06481 763 aa35.02■■■■□ 3.2
GABRB3-206ENST00000554556 EIF2AK4Q9P2K8 1649 aaKnown RBP35■■■■□ 3.19
GABRB3-206ENST00000554556 ZC3H13Q5T200 1668 aaKnown RBP34.99■■■■□ 3.19
GABRB3-206ENST00000554556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.98■■■■□ 3.19
GABRB3-206ENST00000554556 UGGT1Q9NYU2 1555 aa34.97■■■■□ 3.19
GABRB3-206ENST00000554556 ABCC3O15438 1527 aa34.96■■■■□ 3.19
GABRB3-206ENST00000554556 NEURL4Q96JN8 1562 aa34.95■■■■□ 3.18
GABRB3-206ENST00000554556 DUOX2Q9NRD8 1548 aa34.92■■■■□ 3.18
GABRB3-206ENST00000554556 CPS1P31327 1500 aa34.9■■■■□ 3.18
GABRB3-206ENST00000554556 SPATA31D1Q6ZQQ2 1576 aa34.89■■■■□ 3.18
GABRB3-206ENST00000554556 SHANK2Q9UPX8 1470 aa34.89■■■■□ 3.18
GABRB3-206ENST00000554556 DEPDC5O75140 1603 aa34.88■■■■□ 3.17
GABRB3-206ENST00000554556 NPHP4O75161 1426 aaPredicted RBP34.86■■■■□ 3.17
GABRB3-206ENST00000554556 CFAP65Q6ZU64 1925 aaKnown RBP34.86■■■■□ 3.17
GABRB3-206ENST00000554556 MED14O60244 1454 aa34.85■■■■□ 3.17
GABRB3-206ENST00000554556 ERVK-7P63135 1459 aa34.85■■■■□ 3.17
GABRB3-206ENST00000554556 MROH1Q8NDA8 1641 aa34.85■■■■□ 3.17
GABRB3-206ENST00000554556 CEP152O94986 1710 aa34.84■■■■□ 3.17
GABRB3-206ENST00000554556 KIF15Q9NS87 1388 aa34.84■■■■□ 3.17
GABRB3-206ENST00000554556 PTPN23Q9H3S7 1636 aa34.84■■■■□ 3.17
GABRB3-206ENST00000554556 ILDR2Q71H61 639 aa34.83■■■■□ 3.17
GABRB3-206ENST00000554556 ABCC5O15440 1437 aa34.82■■■■□ 3.17
GABRB3-206ENST00000554556 TOM1O60784 492 aa34.82■■■■□ 3.16
GABRB3-206ENST00000554556 RRP7BPQ9NSQ0 103 aa34.82■■■■□ 3.16
GABRB3-206ENST00000554556 CROCC2H7BZ55 1655 aa34.8■■■■□ 3.16
GABRB3-206ENST00000554556 ERBINQ96RT1 1412 aa34.79■■■■□ 3.16
GABRB3-206ENST00000554556 IQGAP1P46940 1657 aa34.77■■■■□ 3.16
GABRB3-206ENST00000554556 VWDEQ8N2E2 1590 aa34.77■■■■□ 3.16
GABRB3-206ENST00000554556 SCAF1Q9H7N4 1312 aaKnown RBP34.76■■■■□ 3.15
GABRB3-206ENST00000554556 DAPK1P53355 1430 aa34.75■■■■□ 3.15
GABRB3-206ENST00000554556 ARHGAP31Q2M1Z3 1444 aa34.73■■■■□ 3.15
GABRB3-206ENST00000554556 FGD6Q6ZV73 1430 aa34.73■■■■□ 3.15
GABRB3-206ENST00000554556 PRDM15P57071 1507 aaPredicted RBP34.73■■■■□ 3.15
GABRB3-206ENST00000554556 PIP4K2BP78356 416 aa34.73■■■■□ 3.15
GABRB3-206ENST00000554556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.72■■■■□ 3.15
GABRB3-206ENST00000554556 KANK1Q14678 1352 aa34.72■■■■□ 3.15
GABRB3-206ENST00000554556 SOCS7O14512 581 aa34.71■■■■□ 3.15
GABRB3-206ENST00000554556 UBR1Q8IWV7 1749 aa34.7■■■■□ 3.15
GABRB3-206ENST00000554556 ANKRD30AQ9BXX3 1397 aa34.69■■■■□ 3.14
GABRB3-206ENST00000554556 CHIC2Q9UKJ5 165 aa34.65■■■■□ 3.14
GABRB3-206ENST00000554556 SCAF11Q99590 1463 aaKnown RBP34.64■■■■□ 3.14
GABRB3-206ENST00000554556 HSPA1LP34931 641 aa34.63■■■■□ 3.13
GABRB3-206ENST00000554556 TXNDC2Q86VQ3 553 aa34.63■■■■□ 3.13
GABRB3-206ENST00000554556 EID1Q9Y6B2 187 aa34.62■■■■□ 3.13
GABRB3-206ENST00000554556 STAG3Q9UJ98 1225 aa34.59■■■■□ 3.13
GABRB3-206ENST00000554556 SLIT1O75093 1534 aa34.59■■■■□ 3.13
GABRB3-206ENST00000554556 ARHGAP23Q9P227 1491 aa34.58■■■■□ 3.13
GABRB3-206ENST00000554556 STRCP1A6NGW2 1772 aa34.57■■■■□ 3.12
GABRB3-206ENST00000554556 LTKP29376 864 aa34.57■■■■□ 3.12
GABRB3-206ENST00000554556 LRRC7Q96NW7 1537 aa34.55■■■■□ 3.12
GABRB3-206ENST00000554556 LMTK2Q8IWU2 1503 aa34.55■■■■□ 3.12
GABRB3-206ENST00000554556 SYNMO15061 1565 aa34.54■■■■□ 3.12
GABRB3-206ENST00000554556 PIK3C2BO00750 1634 aa34.53■■■■□ 3.12
GABRB3-206ENST00000554556 FAM50AQ14320 339 aaKnown RBP34.51■■■■□ 3.12
GABRB3-206ENST00000554556 TMEM2Q9UHN6 1383 aa34.49■■■■□ 3.11
GABRB3-206ENST00000554556 IDI1Q13907 227 aa34.49■■■■□ 3.11
GABRB3-206ENST00000554556 ADGRL2O95490 1459 aa34.49■■■■□ 3.11
GABRB3-206ENST00000554556 KDM5AP29375 1690 aaKnown RBP34.48■■■■□ 3.11
GABRB3-206ENST00000554556 ALKQ9UM73 1620 aa34.47■■■■□ 3.11
GABRB3-206ENST00000554556 EFCAB6Q5THR3 1501 aa34.45■■■■□ 3.1
GABRB3-206ENST00000554556 MED1Q15648 1581 aaPredicted RBP34.4■■■■□ 3.1
GABRB3-206ENST00000554556 NOS1P29475 1434 aa34.4■■■■□ 3.1
GABRB3-206ENST00000554556 SLC52A1Q9NWF4 448 aa34.4■■■■□ 3.1
GABRB3-206ENST00000554556 ANKRD50Q9ULJ7 1429 aa34.39■■■■□ 3.1
GABRB3-206ENST00000554556 RPRD2Q5VT52 1461 aaKnown RBP34.33■■■■□ 3.09
GABRB3-206ENST00000554556 ADGRB3O60242 1522 aa34.31■■■■□ 3.08
GABRB3-206ENST00000554556 KCNA6P17658 529 aa34.31■■■■□ 3.08
GABRB3-206ENST00000554556 SENP3Q9H4L4 574 aaPredicted RBP34.31■■■■□ 3.08
GABRB3-206ENST00000554556 XIRP1Q702N8 1843 aaKnown RBP34.31■■■■□ 3.08
GABRB3-206ENST00000554556 SLC26A8Q96RN1 970 aa34.28■■■■□ 3.08
GABRB3-206ENST00000554556 PHF23Q9BUL5 403 aaPredicted RBP34.28■■■■□ 3.08
GABRB3-206ENST00000554556 BCANQ96GW7 911 aa34.27■■■■□ 3.08
GABRB3-206ENST00000554556 TET3O43151 1660 aa34.27■■■■□ 3.08
GABRB3-206ENST00000554556 HDGFP51858 240 aaKnown RBP34.26■■■■□ 3.08
GABRB3-206ENST00000554556 PROSER2Q86WR7 435 aaPredicted RBP34.24■■■■□ 3.07
GABRB3-206ENST00000554556 TMEM94Q12767 1356 aa34.23■■■■□ 3.07
GABRB3-206ENST00000554556 GCC2Q8IWJ2 1684 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms