RNA–Protein interactions for RNA: ENST00000554465.5

SRSF5-207, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 3,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-207ENST00000554465 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.49
SRSF5-207ENST00000554465 NEUROD1Q13562 356 aa12.02□□□□□ -0.49
SRSF5-207ENST00000554465 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.49
SRSF5-207ENST00000554465 KIAA1210Q9ULL0 1709 aa12.01□□□□□ -0.49
SRSF5-207ENST00000554465 YTHDC1Q96MU7 727 aaKnown RBP12.01□□□□□ -0.49
SRSF5-207ENST00000554465 KDM6BO15054 1643 aa12.01□□□□□ -0.49
SRSF5-207ENST00000554465 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
SRSF5-207ENST00000554465 PIK3C2BO00750 1634 aa12□□□□□ -0.49
SRSF5-207ENST00000554465 ARHGAP31Q2M1Z3 1444 aa12□□□□□ -0.49
SRSF5-207ENST00000554465 IFT172Q9UG01 1749 aa11.99□□□□□ -0.49
SRSF5-207ENST00000554465 CFDP1Q9UEE9 299 aaPredicted RBP11.99□□□□□ -0.49
SRSF5-207ENST00000554465 PZPP20742 1482 aa11.99□□□□□ -0.49
SRSF5-207ENST00000554465 DHX57Q6P158 1386 aaKnown RBP11.98□□□□□ -0.49
SRSF5-207ENST00000554465 PPP6R1Q9UPN7 881 aa11.98□□□□□ -0.49
SRSF5-207ENST00000554465 RAB3GAP2Q9H2M9 1393 aa11.97□□□□□ -0.49
SRSF5-207ENST00000554465 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
SRSF5-207ENST00000554465 TRPM2O94759 1503 aa11.97□□□□□ -0.49
SRSF5-207ENST00000554465 EFCAB6Q5THR3 1501 aa11.97□□□□□ -0.49
SRSF5-207ENST00000554465 CAMSAP1Q5T5Y3 1602 aa11.96□□□□□ -0.49
SRSF5-207ENST00000554465 POLR1AO95602 1720 aaPredicted RBP11.96□□□□□ -0.49
SRSF5-207ENST00000554465 DHX29Q7Z478 1369 aaKnown RBP11.96□□□□□ -0.5
SRSF5-207ENST00000554465 E9PCH4 1651 aa11.95□□□□□ -0.5
SRSF5-207ENST00000554465 PODXL2Q9NZ53 605 aa11.95□□□□□ -0.5
SRSF5-207ENST00000554465 ANKRD50Q9ULJ7 1429 aa11.95□□□□□ -0.5
SRSF5-207ENST00000554465 PTPRTO14522 1441 aa11.95□□□□□ -0.5
SRSF5-207ENST00000554465 TRAPPC8Q9Y2L5 1435 aa11.94□□□□□ -0.5
SRSF5-207ENST00000554465 A2MP01023 1474 aa11.93□□□□□ -0.5
SRSF5-207ENST00000554465 DNAJC5Q9H3Z4 198 aa11.92□□□□□ -0.5
SRSF5-207ENST00000554465 SCAPERQ9BY12 1400 aa11.92□□□□□ -0.5
SRSF5-207ENST00000554465 KIF15Q9NS87 1388 aa11.91□□□□□ -0.5
SRSF5-207ENST00000554465 GTF3C3Q9Y5Q9 886 aa11.91□□□□□ -0.5
SRSF5-207ENST00000554465 STAC3Q96MF2 364 aa11.89□□□□□ -0.51
SRSF5-207ENST00000554465 KIF1BO60333 1816 aa11.88□□□□□ -0.51
SRSF5-207ENST00000554465 ABCC3O15438 1527 aa11.88□□□□□ -0.51
SRSF5-207ENST00000554465 UHRF1BP1Q6BDS2 1440 aa11.87□□□□□ -0.51
SRSF5-207ENST00000554465 PREX1Q8TCU6 1659 aa11.87□□□□□ -0.51
SRSF5-207ENST00000554465 SPATA31D1Q6ZQQ2 1576 aa11.87□□□□□ -0.51
SRSF5-207ENST00000554465 UGGT1Q9NYU2 1555 aa11.86□□□□□ -0.51
SRSF5-207ENST00000554465 TSPY4P0CV99 314 aa11.85□□□□□ -0.51
SRSF5-207ENST00000554465 TSPY10P0CW01 314 aa11.85□□□□□ -0.51
SRSF5-207ENST00000554465 ANKRD30BQ9BXX2 1392 aa11.85□□□□□ -0.51
SRSF5-207ENST00000554465 ZNF142P52746 1687 aaPredicted RBP11.85□□□□□ -0.51
SRSF5-207ENST00000554465 ZNF316A6NFI3 1004 aaPredicted RBP11.84□□□□□ -0.51
SRSF5-207ENST00000554465 ITGAEP38570 1179 aa11.84□□□□□ -0.51
SRSF5-207ENST00000554465 MADDQ8WXG6 1647 aa11.84□□□□□ -0.51
SRSF5-207ENST00000554465 CNTLNQ9NXG0 1405 aa11.84□□□□□ -0.51
SRSF5-207ENST00000554465 TSPOAP1O95153 1857 aa11.84□□□□□ -0.51
SRSF5-207ENST00000554465 SIGLEC1Q9BZZ2 1709 aa11.84□□□□□ -0.51
SRSF5-207ENST00000554465 PPLO60437 1756 aa11.83□□□□□ -0.52
SRSF5-207ENST00000554465 MYOM2P54296 1465 aa11.83□□□□□ -0.52
SRSF5-207ENST00000554465 ADGRB3O60242 1522 aa11.83□□□□□ -0.52
SRSF5-207ENST00000554465 ADAMTSL3P82987 1691 aa11.82□□□□□ -0.52
SRSF5-207ENST00000554465 NRXN1Q9ULB1 1477 aa11.82□□□□□ -0.52
SRSF5-207ENST00000554465 MIER1Q8N108 512 aa11.82□□□□□ -0.52
SRSF5-207ENST00000554465 SPAG9O60271 1321 aaKnown RBP11.81□□□□□ -0.52
SRSF5-207ENST00000554465 NOS1P29475 1434 aa11.81□□□□□ -0.52
SRSF5-207ENST00000554465 SETBP1Q9Y6X0 1596 aa11.81□□□□□ -0.52
SRSF5-207ENST00000554465 MYO3AQ8NEV4 1616 aa11.81□□□□□ -0.52
SRSF5-207ENST00000554465 PKNOX2Q96KN3 472 aa11.8□□□□□ -0.52
SRSF5-207ENST00000554465 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
SRSF5-207ENST00000554465 ZNF644Q9H582 1327 aaPredicted RBP11.79□□□□□ -0.52
SRSF5-207ENST00000554465 CLTCL1P53675 1640 aa11.79□□□□□ -0.52
SRSF5-207ENST00000554465 TRPM1Q7Z4N2 1603 aa11.79□□□□□ -0.52
SRSF5-207ENST00000554465 ZFYVE9O95405 1425 aa11.79□□□□□ -0.52
SRSF5-207ENST00000554465 FAM50AQ14320 339 aaKnown RBP11.78□□□□□ -0.52
SRSF5-207ENST00000554465 KANK1Q14678 1352 aa11.78□□□□□ -0.52
SRSF5-207ENST00000554465 RTN4Q9NQC3 1192 aaKnown RBP11.77□□□□□ -0.52
SRSF5-207ENST00000554465 FER1L4A9Z1Z3 1794 aa11.77□□□□□ -0.53
SRSF5-207ENST00000554465 PRAG1Q86YV5 1406 aa11.77□□□□□ -0.53
SRSF5-207ENST00000554465 ERICH6BQ5W0A0 696 aa11.76□□□□□ -0.53
SRSF5-207ENST00000554465 SYNMO15061 1565 aa11.76□□□□□ -0.53
SRSF5-207ENST00000554465 CLTCQ00610 1675 aaKnown RBP11.76□□□□□ -0.53
SRSF5-207ENST00000554465 IQGAP1P46940 1657 aa11.75□□□□□ -0.53
SRSF5-207ENST00000554465 KNDC1Q76NI1 1749 aa11.75□□□□□ -0.53
SRSF5-207ENST00000554465 NPATQ14207 1427 aa11.75□□□□□ -0.53
SRSF5-207ENST00000554465 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
SRSF5-207ENST00000554465 PLA2R1Q13018 1463 aa11.75□□□□□ -0.53
SRSF5-207ENST00000554465 SPATA31E1Q6ZUB1 1445 aa11.74□□□□□ -0.53
SRSF5-207ENST00000554465 TMEM131LA2VDJ0 1609 aa11.74□□□□□ -0.53
SRSF5-207ENST00000554465 CYB5RLQ6IPT4 315 aa11.74□□□□□ -0.53
SRSF5-207ENST00000554465 HNRNPMP52272 730 aaKnown RBP eCLIP11.73□□□□□ -0.535e-7■■■■□ 22.2
SRSF5-207ENST00000554465 HOMEZQ8IX15 550 aa11.73□□□□□ -0.53
SRSF5-207ENST00000554465 RALGAPBQ86X10 1494 aa11.73□□□□□ -0.53
SRSF5-207ENST00000554465 NEFLP07196 543 aa11.72□□□□□ -0.53
SRSF5-207ENST00000554465 COL17A1Q9UMD9 1497 aaPredicted RBP11.72□□□□□ -0.53
SRSF5-207ENST00000554465 SETD1AO15047 1707 aaKnown RBP11.72□□□□□ -0.53
SRSF5-207ENST00000554465 C3P01024 1663 aa11.71□□□□□ -0.53
SRSF5-207ENST00000554465 DIP2AQ14689 1571 aa11.71□□□□□ -0.53
SRSF5-207ENST00000554465 MPHOSPH9Q99550 1183 aa11.71□□□□□ -0.54
SRSF5-207ENST00000554465 GPRASP1Q5JY77 1395 aa11.7□□□□□ -0.54
SRSF5-207ENST00000554465 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
SRSF5-207ENST00000554465 FAM69CQ0P6D2 419 aa11.69□□□□□ -0.54
SRSF5-207ENST00000554465 UBR1Q8IWV7 1749 aa11.69□□□□□ -0.54
SRSF5-207ENST00000554465 ERVK-7P63135 1459 aa11.69□□□□□ -0.54
SRSF5-207ENST00000554465 NLRP1Q9C000 1473 aa11.69□□□□□ -0.54
SRSF5-207ENST00000554465 YEATS2Q9ULM3 1422 aa11.68□□□□□ -0.54
SRSF5-207ENST00000554465 MYT1LQ9UL68 1186 aa11.68□□□□□ -0.54
SRSF5-207ENST00000554465 RPGRIP1LQ68CZ1 1315 aa11.67□□□□□ -0.54
SRSF5-207ENST00000554465 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
SRSF5-207ENST00000554465 RIMS1Q86UR5 1692 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms