RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 TSPY10P0CW01 314 aa34.61■■■■□ 3.13
RCCD1-202ENST00000554302 MIA2Q96PC5 1412 aa34.6■■■■□ 3.13
RCCD1-202ENST00000554302 MAST1Q9Y2H9 1570 aa34.6■■■■□ 3.13
RCCD1-202ENST00000554302 PLA2R1Q13018 1463 aa34.59■■■■□ 3.13
RCCD1-202ENST00000554302 MYOM3Q5VTT5 1437 aa34.58■■■■□ 3.13
RCCD1-202ENST00000554302 KDM5DQ9BY66 1539 aa34.58■■■■□ 3.13
RCCD1-202ENST00000554302 LTBP4Q8N2S1 1624 aa34.58■■■■□ 3.13
RCCD1-202ENST00000554302 TCOF1Q13428 1488 aaKnown RBP34.54■■■■□ 3.12
RCCD1-202ENST00000554302 FOXD1Q16676 465 aa34.54■■■■□ 3.12
RCCD1-202ENST00000554302 A2ML1A8K2U0 1454 aa34.52■■■■□ 3.12
RCCD1-202ENST00000554302 PZPP20742 1482 aa34.52■■■■□ 3.12
RCCD1-202ENST00000554302 NCKAP5LQ9HCH0 1330 aa34.52■■■■□ 3.12
RCCD1-202ENST00000554302 PKD2Q13563 968 aa34.5■■■■□ 3.11
RCCD1-202ENST00000554302 WASHC2CQ9Y4E1 1318 aa34.5■■■■□ 3.11
RCCD1-202ENST00000554302 DNMT1P26358 1616 aaKnown RBP34.48■■■■□ 3.11
RCCD1-202ENST00000554302 FBXO31Q5XUX0 539 aaPredicted RBP34.48■■■■□ 3.11
RCCD1-202ENST00000554302 RNF17Q9BXT8 1623 aaKnown RBP34.48■■■■□ 3.11
RCCD1-202ENST00000554302 TNRQ92752 1358 aa34.46■■■■□ 3.11
RCCD1-202ENST00000554302 IQSEC2Q5JU85 1478 aa34.46■■■■□ 3.11
RCCD1-202ENST00000554302 EIF2AK4Q9P2K8 1649 aaKnown RBP34.44■■■■□ 3.1
RCCD1-202ENST00000554302 ZC3H13Q5T200 1668 aaKnown RBP34.38■■■■□ 3.09
RCCD1-202ENST00000554302 ABCC3O15438 1527 aa34.37■■■■□ 3.09
RCCD1-202ENST00000554302 MROH1Q8NDA8 1641 aa34.37■■■■□ 3.09
RCCD1-202ENST00000554302 DUOX2Q9NRD8 1548 aa34.35■■■■□ 3.09
RCCD1-202ENST00000554302 ZNF335Q9H4Z2 1342 aaPredicted RBP34.35■■■■□ 3.09
RCCD1-202ENST00000554302 APLP2Q06481 763 aa34.35■■■■□ 3.09
RCCD1-202ENST00000554302 NLRP1Q9C000 1473 aa34.34■■■■□ 3.09
RCCD1-202ENST00000554302 SHANK2Q9UPX8 1470 aa34.34■■■■□ 3.09
RCCD1-202ENST00000554302 PTPN23Q9H3S7 1636 aa34.34■■■■□ 3.09
RCCD1-202ENST00000554302 ABCC5O15440 1437 aa34.34■■■■□ 3.09
RCCD1-202ENST00000554302 CROCC2H7BZ55 1655 aa34.32■■■■□ 3.08
RCCD1-202ENST00000554302 POLR1AO95602 1720 aaPredicted RBP34.3■■■■□ 3.08
RCCD1-202ENST00000554302 SPATA31D1Q6ZQQ2 1576 aa34.29■■■■□ 3.08
RCCD1-202ENST00000554302 NEURL4Q96JN8 1562 aa34.29■■■■□ 3.08
RCCD1-202ENST00000554302 FGD6Q6ZV73 1430 aa34.28■■■■□ 3.08
RCCD1-202ENST00000554302 KIF15Q9NS87 1388 aa34.26■■■■□ 3.08
RCCD1-202ENST00000554302 UGGT1Q9NYU2 1555 aa34.25■■■■□ 3.07
RCCD1-202ENST00000554302 DAPK1P53355 1430 aa34.25■■■■□ 3.07
RCCD1-202ENST00000554302 THEMISQ8N1K5 641 aaPredicted RBP34.25■■■■□ 3.07
RCCD1-202ENST00000554302 ERBINQ96RT1 1412 aa34.24■■■■□ 3.07
RCCD1-202ENST00000554302 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.23■■■■□ 3.07
RCCD1-202ENST00000554302 ERVK-7P63135 1459 aa34.23■■■■□ 3.07
RCCD1-202ENST00000554302 CEP152O94986 1710 aa34.22■■■■□ 3.07
RCCD1-202ENST00000554302 PRDM15P57071 1507 aaPredicted RBP34.22■■■■□ 3.07
RCCD1-202ENST00000554302 ANKLE2Q86XL3 938 aa34.19■■■■□ 3.06
RCCD1-202ENST00000554302 MED14O60244 1454 aa34.19■■■■□ 3.06
RCCD1-202ENST00000554302 DEPDC5O75140 1603 aa34.19■■■■□ 3.06
RCCD1-202ENST00000554302 RRP7BPQ9NSQ0 103 aa34.18■■■■□ 3.06
RCCD1-202ENST00000554302 ARHGAP31Q2M1Z3 1444 aa34.16■■■■□ 3.06
RCCD1-202ENST00000554302 NPHP4O75161 1426 aaPredicted RBP34.1■■■■□ 3.05
RCCD1-202ENST00000554302 CPS1P31327 1500 aa34.09■■■■□ 3.05
RCCD1-202ENST00000554302 VWDEQ8N2E2 1590 aa34.09■■■■□ 3.05
RCCD1-202ENST00000554302 ANKRD30AQ9BXX3 1397 aa34.09■■■■□ 3.05
RCCD1-202ENST00000554302 UBAP1LF5GYI3 381 aa34.07■■■■□ 3.04
RCCD1-202ENST00000554302 UBR1Q8IWV7 1749 aa34.07■■■■□ 3.04
RCCD1-202ENST00000554302 CFAP65Q6ZU64 1925 aaKnown RBP34.05■■■■□ 3.04
RCCD1-202ENST00000554302 IQGAP1P46940 1657 aa34.04■■■■□ 3.04
RCCD1-202ENST00000554302 ADGRL2O95490 1459 aa34.04■■■■□ 3.04
RCCD1-202ENST00000554302 CHIC2Q9UKJ5 165 aa34.04■■■■□ 3.04
RCCD1-202ENST00000554302 LMTK2Q8IWU2 1503 aa34.04■■■■□ 3.04
RCCD1-202ENST00000554302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.01■■■■□ 3.033e-6■■□□□ 11.7
RCCD1-202ENST00000554302 KANK1Q14678 1352 aa34■■■■□ 3.03
RCCD1-202ENST00000554302 ARHGAP23Q9P227 1491 aa33.98■■■■□ 3.03
RCCD1-202ENST00000554302 SLIT1O75093 1534 aa33.97■■■■□ 3.03
RCCD1-202ENST00000554302 DISP3Q9P2K9 1392 aa33.94■■■■□ 3.02
RCCD1-202ENST00000554302 SCAF11Q99590 1463 aaKnown RBP33.93■■■■□ 3.02
RCCD1-202ENST00000554302 PIK3C2BO00750 1634 aa33.91■■■■□ 3.02
RCCD1-202ENST00000554302 FAM50AQ14320 339 aaKnown RBP33.91■■■■□ 3.02
RCCD1-202ENST00000554302 LTKP29376 864 aa33.9■■■■□ 3.02
RCCD1-202ENST00000554302 STRCP1A6NGW2 1772 aa33.89■■■■□ 3.02
RCCD1-202ENST00000554302 EFCAB6Q5THR3 1501 aa33.89■■■■□ 3.02
RCCD1-202ENST00000554302 KDM5AP29375 1690 aaKnown RBP33.88■■■■□ 3.01
RCCD1-202ENST00000554302 TOM1O60784 492 aa33.86■■■■□ 3.01
RCCD1-202ENST00000554302 NOS1P29475 1434 aa33.86■■■■□ 3.01
RCCD1-202ENST00000554302 ANKRD50Q9ULJ7 1429 aa33.86■■■■□ 3.01
RCCD1-202ENST00000554302 SYNMO15061 1565 aa33.85■■■■□ 3.01
RCCD1-202ENST00000554302 TXNDC2Q86VQ3 553 aa33.85■■■■□ 3.01
RCCD1-202ENST00000554302 TMEM2Q9UHN6 1383 aa33.84■■■■□ 3.01
RCCD1-202ENST00000554302 IDI1Q13907 227 aa33.83■■■■□ 3.01
RCCD1-202ENST00000554302 LRRC7Q96NW7 1537 aa33.83■■■■□ 3.01
RCCD1-202ENST00000554302 ALKQ9UM73 1620 aa33.82■■■■□ 3.01
RCCD1-202ENST00000554302 ILDR2Q71H61 639 aa33.8■■■■□ 3
RCCD1-202ENST00000554302 EID1Q9Y6B2 187 aa33.79■■■■□ 3
RCCD1-202ENST00000554302 RPRD2Q5VT52 1461 aaKnown RBP33.77■■■■□ 3
RCCD1-202ENST00000554302 PIP4K2BP78356 416 aa33.76■■■□□ 2.99
RCCD1-202ENST00000554302 STAG3Q9UJ98 1225 aa33.74■■■□□ 2.99
RCCD1-202ENST00000554302 ADRA2BP18089 450 aa33.73■■■□□ 2.99
RCCD1-202ENST00000554302 HSPA1LP34931 641 aa33.73■■■□□ 2.99
RCCD1-202ENST00000554302 SLC52A1Q9NWF4 448 aa33.73■■■□□ 2.99
RCCD1-202ENST00000554302 ADGRB3O60242 1522 aa33.73■■■□□ 2.99
RCCD1-202ENST00000554302 ROCK1Q13464 1354 aa33.72■■■□□ 2.99
RCCD1-202ENST00000554302 SCAF1Q9H7N4 1312 aaKnown RBP33.72■■■□□ 2.99
RCCD1-202ENST00000554302 UNC13BO14795 1591 aa33.72■■■□□ 2.99
RCCD1-202ENST00000554302 TET3O43151 1660 aa33.71■■■□□ 2.99
RCCD1-202ENST00000554302 GCC2Q8IWJ2 1684 aa33.65■■■□□ 2.98
RCCD1-202ENST00000554302 XIRP1Q702N8 1843 aaKnown RBP33.63■■■□□ 2.97
RCCD1-202ENST00000554302 IQGAP3Q86VI3 1631 aa33.58■■■□□ 2.97
RCCD1-202ENST00000554302 ZFYVE9O95405 1425 aa33.57■■■□□ 2.96
RCCD1-202ENST00000554302 SOCS7O14512 581 aa33.57■■■□□ 2.96
RCCD1-202ENST00000554302 E9PCH4 1651 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms