RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 FAM135AQ9P2D6 1515 aa29.51■■■□□ 2.32
CPSF2-203ENST00000554290 NCKAP5LQ9HCH0 1330 aa29.51■■■□□ 2.32
CPSF2-203ENST00000554290 CEP170BQ9Y4F5 1589 aaPredicted RBP29.51■■■□□ 2.31
CPSF2-203ENST00000554290 ZNF142P52746 1687 aaPredicted RBP29.5■■■□□ 2.31
CPSF2-203ENST00000554290 PKD2Q13563 968 aa29.5■■■□□ 2.31
CPSF2-203ENST00000554290 KDM5DQ9BY66 1539 aa29.5■■■□□ 2.31
CPSF2-203ENST00000554290 PLA2R1Q13018 1463 aa29.49■■■□□ 2.31
CPSF2-203ENST00000554290 FBXO31Q5XUX0 539 aaPredicted RBP29.46■■■□□ 2.31
CPSF2-203ENST00000554290 MAST1Q9Y2H9 1570 aa29.45■■■□□ 2.31
CPSF2-203ENST00000554290 A2ML1A8K2U0 1454 aa29.45■■■□□ 2.31
CPSF2-203ENST00000554290 TNRQ92752 1358 aa29.45■■■□□ 2.31
CPSF2-203ENST00000554290 PZPP20742 1482 aa29.44■■■□□ 2.3
CPSF2-203ENST00000554290 LTBP4Q8N2S1 1624 aa29.42■■■□□ 2.3
CPSF2-203ENST00000554290 TCOF1Q13428 1488 aaKnown RBP29.42■■■□□ 2.3
CPSF2-203ENST00000554290 DNMT1P26358 1616 aaKnown RBP29.37■■■□□ 2.29
CPSF2-203ENST00000554290 IQSEC2Q5JU85 1478 aa29.36■■■□□ 2.29
CPSF2-203ENST00000554290 ZNF335Q9H4Z2 1342 aaPredicted RBP29.35■■■□□ 2.29
CPSF2-203ENST00000554290 RNF17Q9BXT8 1623 aaKnown RBP29.34■■■□□ 2.29
CPSF2-203ENST00000554290 EIF2AK4Q9P2K8 1649 aaKnown RBP29.32■■■□□ 2.28
CPSF2-203ENST00000554290 THEMISQ8N1K5 641 aaPredicted RBP29.32■■■□□ 2.28
CPSF2-203ENST00000554290 NLRP1Q9C000 1473 aa29.31■■■□□ 2.28
CPSF2-203ENST00000554290 DUOX2Q9NRD8 1548 aa29.3■■■□□ 2.28
CPSF2-203ENST00000554290 ABCC3O15438 1527 aa29.29■■■□□ 2.28
CPSF2-203ENST00000554290 ANKLE2Q86XL3 938 aa29.28■■■□□ 2.28
CPSF2-203ENST00000554290 SHANK2Q9UPX8 1470 aa29.28■■■□□ 2.28
CPSF2-203ENST00000554290 ABCC5O15440 1437 aa29.28■■■□□ 2.28
CPSF2-203ENST00000554290 ZC3H13Q5T200 1668 aaKnown RBP29.28■■■□□ 2.28
CPSF2-203ENST00000554290 PTPN23Q9H3S7 1636 aa29.27■■■□□ 2.28
CPSF2-203ENST00000554290 KIF15Q9NS87 1388 aa29.27■■■□□ 2.28
CPSF2-203ENST00000554290 RRP7BPQ9NSQ0 103 aa29.26■■■□□ 2.27
CPSF2-203ENST00000554290 FGD6Q6ZV73 1430 aa29.25■■■□□ 2.27
CPSF2-203ENST00000554290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.25■■■□□ 2.27
CPSF2-203ENST00000554290 UGGT1Q9NYU2 1555 aa29.24■■■□□ 2.27
CPSF2-203ENST00000554290 DAPK1P53355 1430 aa29.22■■■□□ 2.27
CPSF2-203ENST00000554290 ERBINQ96RT1 1412 aa29.21■■■□□ 2.27
CPSF2-203ENST00000554290 MROH1Q8NDA8 1641 aa29.21■■■□□ 2.27
CPSF2-203ENST00000554290 CROCC2H7BZ55 1655 aa29.19■■■□□ 2.26
CPSF2-203ENST00000554290 SPATA31D1Q6ZQQ2 1576 aa29.19■■■□□ 2.26
CPSF2-203ENST00000554290 POLR1AO95602 1720 aaPredicted RBP29.19■■■□□ 2.26
CPSF2-203ENST00000554290 ERVK-7P63135 1459 aa29.18■■■□□ 2.26
CPSF2-203ENST00000554290 NEURL4Q96JN8 1562 aa29.18■■■□□ 2.26
CPSF2-203ENST00000554290 UBAP1LF5GYI3 381 aa29.17■■■□□ 2.26
CPSF2-203ENST00000554290 ANKRD30AQ9BXX3 1397 aa29.16■■■□□ 2.26
CPSF2-203ENST00000554290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.15■■■□□ 2.262e-7■□□□□ 8
CPSF2-203ENST00000554290 CHIC2Q9UKJ5 165 aa29.15■■■□□ 2.26
CPSF2-203ENST00000554290 KANK1Q14678 1352 aa29.13■■■□□ 2.25
CPSF2-203ENST00000554290 CEP152O94986 1710 aa29.13■■■□□ 2.25
CPSF2-203ENST00000554290 PRDM15P57071 1507 aaPredicted RBP29.13■■■□□ 2.25
CPSF2-203ENST00000554290 NPHP4O75161 1426 aaPredicted RBP29.12■■■□□ 2.25
CPSF2-203ENST00000554290 ARHGAP31Q2M1Z3 1444 aa29.12■■■□□ 2.25
CPSF2-203ENST00000554290 MED14O60244 1454 aa29.12■■■□□ 2.25
CPSF2-203ENST00000554290 DEPDC5O75140 1603 aa29.11■■■□□ 2.25
CPSF2-203ENST00000554290 CPS1P31327 1500 aa29.1■■■□□ 2.25
CPSF2-203ENST00000554290 FAM50AQ14320 339 aaKnown RBP29.07■■■□□ 2.24
CPSF2-203ENST00000554290 DISP3Q9P2K9 1392 aa29.06■■■□□ 2.24
CPSF2-203ENST00000554290 CFAP65Q6ZU64 1925 aaKnown RBP29.02■■■□□ 2.24
CPSF2-203ENST00000554290 VWDEQ8N2E2 1590 aa29.01■■■□□ 2.24
CPSF2-203ENST00000554290 TOM1O60784 492 aa29.01■■■□□ 2.23
CPSF2-203ENST00000554290 IQGAP1P46940 1657 aa29■■■□□ 2.23
CPSF2-203ENST00000554290 ADGRL2O95490 1459 aa29■■■□□ 2.23
CPSF2-203ENST00000554290 UBR1Q8IWV7 1749 aa28.99■■■□□ 2.23
CPSF2-203ENST00000554290 LMTK2Q8IWU2 1503 aa28.98■■■□□ 2.23
CPSF2-203ENST00000554290 TXNDC2Q86VQ3 553 aa28.97■■■□□ 2.23
CPSF2-203ENST00000554290 STAG3Q9UJ98 1225 aa28.97■■■□□ 2.23
CPSF2-203ENST00000554290 EID1Q9Y6B2 187 aa28.97■■■□□ 2.23
CPSF2-203ENST00000554290 SCAF11Q99590 1463 aaKnown RBP28.97■■■□□ 2.23
CPSF2-203ENST00000554290 SCAF1Q9H7N4 1312 aaKnown RBP28.95■■■□□ 2.23
CPSF2-203ENST00000554290 ARHGAP23Q9P227 1491 aa28.94■■■□□ 2.22
CPSF2-203ENST00000554290 SLIT1O75093 1534 aa28.94■■■□□ 2.22
CPSF2-203ENST00000554290 LTKP29376 864 aa28.93■■■□□ 2.22
CPSF2-203ENST00000554290 PIP4K2BP78356 416 aa28.93■■■□□ 2.22
CPSF2-203ENST00000554290 ANKRD50Q9ULJ7 1429 aa28.93■■■□□ 2.22
CPSF2-203ENST00000554290 IDI1Q13907 227 aa28.9■■■□□ 2.22
CPSF2-203ENST00000554290 TMEM2Q9UHN6 1383 aa28.88■■■□□ 2.21
CPSF2-203ENST00000554290 PIK3C2BO00750 1634 aa28.88■■■□□ 2.21
CPSF2-203ENST00000554290 EFCAB6Q5THR3 1501 aa28.87■■■□□ 2.21
CPSF2-203ENST00000554290 SLC52A1Q9NWF4 448 aa28.86■■■□□ 2.21
CPSF2-203ENST00000554290 NOS1P29475 1434 aa28.85■■■□□ 2.21
CPSF2-203ENST00000554290 ILDR2Q71H61 639 aa28.84■■■□□ 2.21
CPSF2-203ENST00000554290 LRRC7Q96NW7 1537 aa28.84■■■□□ 2.21
CPSF2-203ENST00000554290 HSPA1LP34931 641 aa28.83■■■□□ 2.21
CPSF2-203ENST00000554290 KDM5AP29375 1690 aaKnown RBP28.83■■■□□ 2.21
CPSF2-203ENST00000554290 SYNMO15061 1565 aa28.81■■■□□ 2.2
CPSF2-203ENST00000554290 RPRD2Q5VT52 1461 aaKnown RBP28.81■■■□□ 2.2
CPSF2-203ENST00000554290 STRCP1A6NGW2 1772 aa28.8■■■□□ 2.2
CPSF2-203ENST00000554290 ROCK1Q13464 1354 aa28.78■■■□□ 2.2
CPSF2-203ENST00000554290 ADGRB3O60242 1522 aa28.74■■■□□ 2.19
CPSF2-203ENST00000554290 TET3O43151 1660 aa28.73■■■□□ 2.19
CPSF2-203ENST00000554290 ALKQ9UM73 1620 aa28.72■■■□□ 2.19
CPSF2-203ENST00000554290 ITGAEP38570 1179 aa28.71■■■□□ 2.19
CPSF2-203ENST00000554290 PPARGC1BQ86YN6 1023 aaKnown RBP28.71■■■□□ 2.19
CPSF2-203ENST00000554290 SLC26A8Q96RN1 970 aa28.71■■■□□ 2.19
CPSF2-203ENST00000554290 SOCS7O14512 581 aa28.7■■■□□ 2.18
CPSF2-203ENST00000554290 HDGFP51858 240 aaKnown RBP28.7■■■□□ 2.18
CPSF2-203ENST00000554290 BCANQ96GW7 911 aa28.7■■■□□ 2.18
CPSF2-203ENST00000554290 UNC13BO14795 1591 aa28.7■■■□□ 2.18
CPSF2-203ENST00000554290 KCNA6P17658 529 aa28.69■■■□□ 2.18
CPSF2-203ENST00000554290 GCC2Q8IWJ2 1684 aa28.65■■■□□ 2.18
CPSF2-203ENST00000554290 NUP155O75694 1391 aa28.63■■■□□ 2.17
CPSF2-203ENST00000554290 PPP1R15AO75807 674 aaPredicted RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms