RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ZNF777Q9ULD5 760 aaPredicted RBP10.33□□□□□ -0.76
LINC00517-202ENST00000554257 ANKRD30AQ9BXX3 1397 aa10.33□□□□□ -0.76
LINC00517-202ENST00000554257 RAPGEF3O95398 923 aa10.32□□□□□ -0.76
LINC00517-202ENST00000554257 SPHKAPQ2M3C7 1700 aa10.32□□□□□ -0.76
LINC00517-202ENST00000554257 CLTCQ00610 1675 aaKnown RBP10.32□□□□□ -0.76
LINC00517-202ENST00000554257 FER1L4A9Z1Z3 1794 aa10.32□□□□□ -0.76
LINC00517-202ENST00000554257 DHX29Q7Z478 1369 aaKnown RBP10.32□□□□□ -0.76
LINC00517-202ENST00000554257 ANKRD50Q9ULJ7 1429 aa10.31□□□□□ -0.76
LINC00517-202ENST00000554257 HRCP23327 699 aa10.31□□□□□ -0.76
LINC00517-202ENST00000554257 EFCAB6Q5THR3 1501 aa10.31□□□□□ -0.76
LINC00517-202ENST00000554257 PIK3C2BO00750 1634 aa10.31□□□□□ -0.76
LINC00517-202ENST00000554257 ABCC3O15438 1527 aa10.3□□□□□ -0.76
LINC00517-202ENST00000554257 PREX1Q8TCU6 1659 aa10.29□□□□□ -0.76
LINC00517-202ENST00000554257 SPAG9O60271 1321 aaKnown RBP10.29□□□□□ -0.76
LINC00517-202ENST00000554257 C3P01024 1663 aa10.29□□□□□ -0.76
LINC00517-202ENST00000554257 PCGF6Q9BYE7 350 aa10.29□□□□□ -0.76
LINC00517-202ENST00000554257 IFT172Q9UG01 1749 aa10.28□□□□□ -0.76
LINC00517-202ENST00000554257 DHX57Q6P158 1386 aaKnown RBP10.27□□□□□ -0.77
LINC00517-202ENST00000554257 SYNMO15061 1565 aa10.26□□□□□ -0.77
LINC00517-202ENST00000554257 CHIC2Q9UKJ5 165 aa10.26□□□□□ -0.77
LINC00517-202ENST00000554257 MYO5BQ9ULV0 1848 aa10.26□□□□□ -0.77
LINC00517-202ENST00000554257 MADDQ8WXG6 1647 aa10.25□□□□□ -0.77
LINC00517-202ENST00000554257 RRP7BPQ9NSQ0 103 aa10.25□□□□□ -0.77
LINC00517-202ENST00000554257 NEURL4Q96JN8 1562 aa10.24□□□□□ -0.77
LINC00517-202ENST00000554257 KDM5AP29375 1690 aaKnown RBP10.24□□□□□ -0.77
LINC00517-202ENST00000554257 CLTCL1P53675 1640 aa10.24□□□□□ -0.77
LINC00517-202ENST00000554257 TRHP20396 242 aaPredicted RBP10.24□□□□□ -0.77
LINC00517-202ENST00000554257 PLA2R1Q13018 1463 aa10.23□□□□□ -0.77
LINC00517-202ENST00000554257 TRPM2O94759 1503 aa10.23□□□□□ -0.77
LINC00517-202ENST00000554257 TSPY4P0CV99 314 aa10.23□□□□□ -0.77
LINC00517-202ENST00000554257 TSPY10P0CW01 314 aa10.23□□□□□ -0.77
LINC00517-202ENST00000554257 SPATA31D1Q6ZQQ2 1576 aa10.23□□□□□ -0.77
LINC00517-202ENST00000554257 ITGAEP38570 1179 aa10.23□□□□□ -0.77
LINC00517-202ENST00000554257 RIMS1Q86UR5 1692 aaKnown RBP10.22□□□□□ -0.77
LINC00517-202ENST00000554257 ARHGAP31Q2M1Z3 1444 aa10.22□□□□□ -0.77
LINC00517-202ENST00000554257 ZNF142P52746 1687 aaPredicted RBP10.21□□□□□ -0.77
LINC00517-202ENST00000554257 PTPRTO14522 1441 aa10.21□□□□□ -0.77
LINC00517-202ENST00000554257 RPRD2Q5VT52 1461 aaKnown RBP10.21□□□□□ -0.78
LINC00517-202ENST00000554257 CFAP65Q6ZU64 1925 aaKnown RBP10.2□□□□□ -0.78
LINC00517-202ENST00000554257 KIF1BO60333 1816 aa10.2□□□□□ -0.78
LINC00517-202ENST00000554257 PPLO60437 1756 aa10.19□□□□□ -0.78
LINC00517-202ENST00000554257 UBR1Q8IWV7 1749 aa10.18□□□□□ -0.78
LINC00517-202ENST00000554257 NOS1P29475 1434 aa10.18□□□□□ -0.78
LINC00517-202ENST00000554257 TMEM131LA2VDJ0 1609 aa10.18□□□□□ -0.78
LINC00517-202ENST00000554257 NPATQ14207 1427 aa10.18□□□□□ -0.78
LINC00517-202ENST00000554257 MYO3AQ8NEV4 1616 aa10.18□□□□□ -0.78
LINC00517-202ENST00000554257 ANKRD30BQ9BXX2 1392 aa10.17□□□□□ -0.78
LINC00517-202ENST00000554257 ADGRB3O60242 1522 aa10.16□□□□□ -0.78
LINC00517-202ENST00000554257 UGGT1Q9NYU2 1555 aa10.16□□□□□ -0.78
LINC00517-202ENST00000554257 SETD1AO15047 1707 aaKnown RBP10.15□□□□□ -0.78
LINC00517-202ENST00000554257 ACIN1Q9UKV3 1341 aaKnown RBP10.15□□□□□ -0.78
LINC00517-202ENST00000554257 ERVK-7P63135 1459 aa10.15□□□□□ -0.79
LINC00517-202ENST00000554257 NUP155O75694 1391 aa10.13□□□□□ -0.79
LINC00517-202ENST00000554257 MPHOSPH9Q99550 1183 aa10.13□□□□□ -0.79
LINC00517-202ENST00000554257 KIF3BO15066 747 aa10.11□□□□□ -0.79
LINC00517-202ENST00000554257 PPP6R1Q9UPN7 881 aa10.11□□□□□ -0.79
LINC00517-202ENST00000554257 SPATA31E1Q6ZUB1 1445 aa10.11□□□□□ -0.79
LINC00517-202ENST00000554257 CNTLNQ9NXG0 1405 aa10.11□□□□□ -0.79
LINC00517-202ENST00000554257 CLSPNQ9HAW4 1339 aa10.1□□□□□ -0.79
LINC00517-202ENST00000554257 NRXN3Q9Y4C0 1643 aa10.1□□□□□ -0.79
LINC00517-202ENST00000554257 KIAA1210Q9ULL0 1709 aa10.1□□□□□ -0.79
LINC00517-202ENST00000554257 NEXMIFQ5QGS0 1516 aa10.1□□□□□ -0.79
LINC00517-202ENST00000554257 TRPM1Q7Z4N2 1603 aa10.09□□□□□ -0.79
LINC00517-202ENST00000554257 NRXN1Q9ULB1 1477 aa10.08□□□□□ -0.8
LINC00517-202ENST00000554257 POLR1AO95602 1720 aaPredicted RBP10.07□□□□□ -0.8
LINC00517-202ENST00000554257 KANK1Q14678 1352 aa10.06□□□□□ -0.8
LINC00517-202ENST00000554257 PTPRMP28827 1452 aa10.06□□□□□ -0.8
LINC00517-202ENST00000554257 LAMC1P11047 1609 aa10.06□□□□□ -0.8
LINC00517-202ENST00000554257 ZMYM3Q14202 1370 aa10.06□□□□□ -0.8
LINC00517-202ENST00000554257 CEP170BQ9Y4F5 1589 aaPredicted RBP10.06□□□□□ -0.8
LINC00517-202ENST00000554257 FOXD1Q16676 465 aa10.05□□□□□ -0.8
LINC00517-202ENST00000554257 IQGAP1P46940 1657 aa10.05□□□□□ -0.8
LINC00517-202ENST00000554257 SETD1BQ9UPS6 1966 aaKnown RBP10.05□□□□□ -0.8
LINC00517-202ENST00000554257 PKD2Q13563 968 aa10.05□□□□□ -0.8
LINC00517-202ENST00000554257 SLIT1O75093 1534 aa10.04□□□□□ -0.8
LINC00517-202ENST00000554257 STRCQ7RTU9 1775 aa10.03□□□□□ -0.8
LINC00517-202ENST00000554257 MYOM2P54296 1465 aa10.03□□□□□ -0.8
LINC00517-202ENST00000554257 A2ML1A8K2U0 1454 aa10.03□□□□□ -0.8
LINC00517-202ENST00000554257 ARHGAP23Q9P227 1491 aa10.03□□□□□ -0.8
LINC00517-202ENST00000554257 SLC4A1APQ9BWU0 796 aaKnown RBP10.03□□□□□ -0.8
LINC00517-202ENST00000554257 ZFYVE9O95405 1425 aa10.02□□□□□ -0.81
LINC00517-202ENST00000554257 GGT6Q6P531 493 aa10.02□□□□□ -0.81
LINC00517-202ENST00000554257 UHRF1BP1Q6BDS2 1440 aa10.02□□□□□ -0.81
LINC00517-202ENST00000554257 NLRP1Q9C000 1473 aa10.02□□□□□ -0.81
LINC00517-202ENST00000554257 KDM4FA0A1W2PPD8 638 aa10.01□□□□□ -0.81
LINC00517-202ENST00000554257 WASHC2CQ9Y4E1 1318 aa10.01□□□□□ -0.81
LINC00517-202ENST00000554257 TRIM52Q96A61 297 aa10.01□□□□□ -0.81
LINC00517-202ENST00000554257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.81
LINC00517-202ENST00000554257 KNDC1Q76NI1 1749 aa10□□□□□ -0.81
LINC00517-202ENST00000554257 SETBP1Q9Y6X0 1596 aa10□□□□□ -0.81
LINC00517-202ENST00000554257 ASXL1Q8IXJ9 1541 aa10□□□□□ -0.81
LINC00517-202ENST00000554257 SIN3AQ96ST3 1273 aa9.99□□□□□ -0.81
LINC00517-202ENST00000554257 MYT1LQ9UL68 1186 aa9.99□□□□□ -0.81
LINC00517-202ENST00000554257 CCDC144AA2RUR9 1427 aa9.99□□□□□ -0.81
LINC00517-202ENST00000554257 FBXO31Q5XUX0 539 aaPredicted RBP9.98□□□□□ -0.81
LINC00517-202ENST00000554257 ADGRB1O14514 1584 aa9.98□□□□□ -0.81
LINC00517-202ENST00000554257 ARHGEF28Q8N1W1 1705 aaKnown RBP9.97□□□□□ -0.81
LINC00517-202ENST00000554257 TNRQ92752 1358 aa9.97□□□□□ -0.81
LINC00517-202ENST00000554257 LMTK3Q96Q04 1460 aa9.97□□□□□ -0.81
LINC00517-202ENST00000554257 STRCP1A6NGW2 1772 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms