RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
LINC00520-202ENST00000554196 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
LINC00520-202ENST00000554196 SCAPERQ9BY12 1400 aa13.33□□□□□ -0.28
LINC00520-202ENST00000554196 RNF17Q9BXT8 1623 aaKnown RBP13.32□□□□□ -0.28
LINC00520-202ENST00000554196 TSPOAP1O95153 1857 aa13.32□□□□□ -0.28
LINC00520-202ENST00000554196 TET3O43151 1660 aa13.32□□□□□ -0.28
LINC00520-202ENST00000554196 RPRD2Q5VT52 1461 aaKnown RBP13.32□□□□□ -0.28
LINC00520-202ENST00000554196 TEX14Q8IWB6 1497 aa13.32□□□□□ -0.28
LINC00520-202ENST00000554196 MPHOSPH9Q99550 1183 aa13.32□□□□□ -0.28
LINC00520-202ENST00000554196 SPAG9O60271 1321 aaKnown RBP13.32□□□□□ -0.28
LINC00520-202ENST00000554196 TONSLQ96HA7 1378 aa13.32□□□□□ -0.28
LINC00520-202ENST00000554196 PRDM15P57071 1507 aaPredicted RBP13.31□□□□□ -0.28
LINC00520-202ENST00000554196 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
LINC00520-202ENST00000554196 MLH3Q9UHC1 1453 aa13.3□□□□□ -0.28
LINC00520-202ENST00000554196 ZMYM4Q5VZL5 1548 aa13.3□□□□□ -0.28
LINC00520-202ENST00000554196 ABCA6Q8N139 1617 aa13.3□□□□□ -0.28
LINC00520-202ENST00000554196 ANKRD30BQ9BXX2 1392 aa13.29□□□□□ -0.28
LINC00520-202ENST00000554196 SPHKAPQ2M3C7 1700 aa13.28□□□□□ -0.28
LINC00520-202ENST00000554196 NUP155O75694 1391 aa13.28□□□□□ -0.28
LINC00520-202ENST00000554196 VWDEQ8N2E2 1590 aa13.28□□□□□ -0.28
LINC00520-202ENST00000554196 FRMPD1Q5SYB0 1578 aa13.27□□□□□ -0.29
LINC00520-202ENST00000554196 MROH1Q8NDA8 1641 aa13.27□□□□□ -0.29
LINC00520-202ENST00000554196 ZC3H13Q5T200 1668 aaKnown RBP13.26□□□□□ -0.29
LINC00520-202ENST00000554196 E9PCH4 1651 aa13.25□□□□□ -0.29
LINC00520-202ENST00000554196 DIP2CQ9Y2E4 1556 aa13.25□□□□□ -0.29
LINC00520-202ENST00000554196 CEP152O94986 1710 aa13.25□□□□□ -0.29
LINC00520-202ENST00000554196 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
LINC00520-202ENST00000554196 A2MP01023 1474 aa13.23□□□□□ -0.29
LINC00520-202ENST00000554196 ZNF316A6NFI3 1004 aaPredicted RBP13.23□□□□□ -0.29
LINC00520-202ENST00000554196 RTN4Q9NQC3 1192 aaKnown RBP13.23□□□□□ -0.29
LINC00520-202ENST00000554196 REREQ9P2R6 1566 aa13.23□□□□□ -0.29
LINC00520-202ENST00000554196 ATP10AO60312 1499 aa13.23□□□□□ -0.29
LINC00520-202ENST00000554196 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
LINC00520-202ENST00000554196 LMTK2Q8IWU2 1503 aa13.22□□□□□ -0.29
LINC00520-202ENST00000554196 DHX29Q7Z478 1369 aaKnown RBP13.21□□□□□ -0.29
LINC00520-202ENST00000554196 AFAP1Q8N556 730 aa13.21□□□□□ -0.29
LINC00520-202ENST00000554196 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.3
LINC00520-202ENST00000554196 KANK1Q14678 1352 aa13.2□□□□□ -0.3
LINC00520-202ENST00000554196 TRPM2O94759 1503 aa13.2□□□□□ -0.3
LINC00520-202ENST00000554196 EFCAB6Q5THR3 1501 aa13.2□□□□□ -0.3
LINC00520-202ENST00000554196 PKD2Q13563 968 aa13.2□□□□□ -0.3
LINC00520-202ENST00000554196 KIF1BO60333 1816 aa13.18□□□□□ -0.3
LINC00520-202ENST00000554196 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
LINC00520-202ENST00000554196 NEURL4Q96JN8 1562 aa13.18□□□□□ -0.3
LINC00520-202ENST00000554196 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
LINC00520-202ENST00000554196 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
LINC00520-202ENST00000554196 CCDC144AA2RUR9 1427 aa13.16□□□□□ -0.3
LINC00520-202ENST00000554196 FAM69CQ0P6D2 419 aa13.16□□□□□ -0.3
LINC00520-202ENST00000554196 MYT1LQ9UL68 1186 aa13.15□□□□□ -0.3
LINC00520-202ENST00000554196 LAMC1P11047 1609 aa13.13□□□□□ -0.31
LINC00520-202ENST00000554196 CLTCL1P53675 1640 aa13.13□□□□□ -0.31
LINC00520-202ENST00000554196 AGLP35573 1532 aa13.13□□□□□ -0.31
LINC00520-202ENST00000554196 ABCC3O15438 1527 aa13.12□□□□□ -0.31
LINC00520-202ENST00000554196 UHRF1BP1Q6BDS2 1440 aa13.12□□□□□ -0.31
LINC00520-202ENST00000554196 IFT172Q9UG01 1749 aa13.11□□□□□ -0.31
LINC00520-202ENST00000554196 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
LINC00520-202ENST00000554196 PTPRTO14522 1441 aa13.11□□□□□ -0.31
LINC00520-202ENST00000554196 PLA2R1Q13018 1463 aa13.1□□□□□ -0.31
LINC00520-202ENST00000554196 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
LINC00520-202ENST00000554196 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
LINC00520-202ENST00000554196 KIF3BO15066 747 aa13.09□□□□□ -0.31
LINC00520-202ENST00000554196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC00520-202ENST00000554196 KIAA1210Q9ULL0 1709 aa13.08□□□□□ -0.32
LINC00520-202ENST00000554196 CFAP65Q6ZU64 1925 aaKnown RBP13.08□□□□□ -0.32
LINC00520-202ENST00000554196 DIEXFQ68CQ4 756 aaKnown RBP13.08□□□□□ -0.32
LINC00520-202ENST00000554196 L3MBTL2Q969R5 705 aa13.08□□□□□ -0.32
LINC00520-202ENST00000554196 YEATS2Q9ULM3 1422 aa13.07□□□□□ -0.32
LINC00520-202ENST00000554196 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
LINC00520-202ENST00000554196 PREX1Q8TCU6 1659 aa13.06□□□□□ -0.32
LINC00520-202ENST00000554196 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
LINC00520-202ENST00000554196 MROH2AA6NES4 1674 aa13.05□□□□□ -0.32
LINC00520-202ENST00000554196 SIGLEC1Q9BZZ2 1709 aa13.05□□□□□ -0.32
LINC00520-202ENST00000554196 RAPGEF3O95398 923 aa13.05□□□□□ -0.32
LINC00520-202ENST00000554196 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
LINC00520-202ENST00000554196 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
LINC00520-202ENST00000554196 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
LINC00520-202ENST00000554196 PPLO60437 1756 aa13.04□□□□□ -0.32
LINC00520-202ENST00000554196 SPATA31E1Q6ZUB1 1445 aa13.04□□□□□ -0.32
LINC00520-202ENST00000554196 ADGRB3O60242 1522 aa13.03□□□□□ -0.32
LINC00520-202ENST00000554196 CLTCQ00610 1675 aaKnown RBP13.02□□□□□ -0.32
LINC00520-202ENST00000554196 NPATQ14207 1427 aa13.01□□□□□ -0.33
LINC00520-202ENST00000554196 PRAG1Q86YV5 1406 aa13.01□□□□□ -0.33
LINC00520-202ENST00000554196 MYOM2P54296 1465 aa13.01□□□□□ -0.33
LINC00520-202ENST00000554196 SYNMO15061 1565 aa13□□□□□ -0.33
LINC00520-202ENST00000554196 STAC3Q96MF2 364 aa13□□□□□ -0.33
LINC00520-202ENST00000554196 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
LINC00520-202ENST00000554196 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
LINC00520-202ENST00000554196 NOS1P29475 1434 aa12.98□□□□□ -0.33
LINC00520-202ENST00000554196 EIF4G2P78344 907 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC00520-202ENST00000554196 COL17A1Q9UMD9 1497 aaPredicted RBP12.97□□□□□ -0.33
LINC00520-202ENST00000554196 UGGT1Q9NYU2 1555 aa12.96□□□□□ -0.33
LINC00520-202ENST00000554196 NBPF8Q3BBV2 869 aa12.96□□□□□ -0.33
LINC00520-202ENST00000554196 CNKSR2Q8WXI2 1034 aa12.96□□□□□ -0.33
LINC00520-202ENST00000554196 GPRASP1Q5JY77 1395 aa12.95□□□□□ -0.34
LINC00520-202ENST00000554196 WASHC2CQ9Y4E1 1318 aa12.95□□□□□ -0.34
LINC00520-202ENST00000554196 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
LINC00520-202ENST00000554196 SPATA31D1Q6ZQQ2 1576 aa12.94□□□□□ -0.34
LINC00520-202ENST00000554196 KDM5AP29375 1690 aaKnown RBP12.94□□□□□ -0.34
LINC00520-202ENST00000554196 GGT6Q6P531 493 aa12.94□□□□□ -0.34
LINC00520-202ENST00000554196 USP47Q96K76 1375 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms