RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 BCORL1Q5H9F3 1711 aa11.25□□□□□ -0.61
TDP1-209ENST00000554180 NUP155O75694 1391 aa11.25□□□□□ -0.61
TDP1-209ENST00000554180 YEATS2Q9ULM3 1422 aa11.25□□□□□ -0.61
TDP1-209ENST00000554180 PZPP20742 1482 aa11.25□□□□□ -0.61
TDP1-209ENST00000554180 ARHGEF40Q8TER5 1519 aa11.25□□□□□ -0.61
TDP1-209ENST00000554180 DEPDC5O75140 1603 aa11.24□□□□□ -0.61
TDP1-209ENST00000554180 ATP10AO60312 1499 aa11.24□□□□□ -0.61
TDP1-209ENST00000554180 PRDM15P57071 1507 aaPredicted RBP11.24□□□□□ -0.61
TDP1-209ENST00000554180 MPHOSPH9Q99550 1183 aa11.23□□□□□ -0.61
TDP1-209ENST00000554180 FAM135AQ9P2D6 1515 aa11.23□□□□□ -0.61
TDP1-209ENST00000554180 IQGAP3Q86VI3 1631 aa11.23□□□□□ -0.61
TDP1-209ENST00000554180 RNF17Q9BXT8 1623 aaKnown RBP11.23□□□□□ -0.61
TDP1-209ENST00000554180 AGLP35573 1532 aa11.22□□□□□ -0.61
TDP1-209ENST00000554180 SLC4A1APQ9BWU0 796 aaKnown RBP11.22□□□□□ -0.61
TDP1-209ENST00000554180 VWDEQ8N2E2 1590 aa11.21□□□□□ -0.61
TDP1-209ENST00000554180 KANK1Q14678 1352 aa11.21□□□□□ -0.61
TDP1-209ENST00000554180 KIF3BO15066 747 aa11.2□□□□□ -0.62
TDP1-209ENST00000554180 MROH1Q8NDA8 1641 aa11.2□□□□□ -0.62
TDP1-209ENST00000554180 LMTK2Q8IWU2 1503 aa11.19□□□□□ -0.62
TDP1-209ENST00000554180 ANKRD30BQ9BXX2 1392 aa11.17□□□□□ -0.62
TDP1-209ENST00000554180 PKD2Q13563 968 aa11.17□□□□□ -0.62
TDP1-209ENST00000554180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.16□□□□□ -0.62
TDP1-209ENST00000554180 TIMELESSQ9UNS1 1208 aa11.16□□□□□ -0.62
TDP1-209ENST00000554180 PPP6R1Q9UPN7 881 aa11.16□□□□□ -0.62
TDP1-209ENST00000554180 TET3O43151 1660 aa11.16□□□□□ -0.62
TDP1-209ENST00000554180 ZC3H13Q5T200 1668 aaKnown RBP11.14□□□□□ -0.63
TDP1-209ENST00000554180 RPRD2Q5VT52 1461 aaKnown RBP11.14□□□□□ -0.63
TDP1-209ENST00000554180 ABCC3O15438 1527 aa11.14□□□□□ -0.63
TDP1-209ENST00000554180 EFCAB6Q5THR3 1501 aa11.14□□□□□ -0.63
TDP1-209ENST00000554180 GGT6Q6P531 493 aa11.12□□□□□ -0.63
TDP1-209ENST00000554180 ARHGAP31Q2M1Z3 1444 aa11.11□□□□□ -0.63
TDP1-209ENST00000554180 FOXD1Q16676 465 aa11.11□□□□□ -0.63
TDP1-209ENST00000554180 WASHC2CQ9Y4E1 1318 aa11.1□□□□□ -0.63
TDP1-209ENST00000554180 PTPRTO14522 1441 aa11.1□□□□□ -0.63
TDP1-209ENST00000554180 E9PCH4 1651 aa11.1□□□□□ -0.63
TDP1-209ENST00000554180 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
TDP1-209ENST00000554180 TRPM2O94759 1503 aa11.09□□□□□ -0.63
TDP1-209ENST00000554180 PLA2R1Q13018 1463 aa11.09□□□□□ -0.63
TDP1-209ENST00000554180 SIN3AQ96ST3 1273 aa11.09□□□□□ -0.63
TDP1-209ENST00000554180 SIGLEC1Q9BZZ2 1709 aa11.09□□□□□ -0.63
TDP1-209ENST00000554180 NPATQ14207 1427 aa11.09□□□□□ -0.63
TDP1-209ENST00000554180 TONSLQ96HA7 1378 aa11.08□□□□□ -0.64
TDP1-209ENST00000554180 CEP152O94986 1710 aa11.08□□□□□ -0.64
TDP1-209ENST00000554180 CAMSAP1Q5T5Y3 1602 aa11.08□□□□□ -0.64
TDP1-209ENST00000554180 CNTLNQ9NXG0 1405 aa11.08□□□□□ -0.64
TDP1-209ENST00000554180 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
TDP1-209ENST00000554180 SPHKAPQ2M3C7 1700 aa11.06□□□□□ -0.64
TDP1-209ENST00000554180 ARID4BQ4LE39 1312 aaPredicted RBP11.06□□□□□ -0.64
TDP1-209ENST00000554180 NOS1P29475 1434 aa11.05□□□□□ -0.64
TDP1-209ENST00000554180 NEURL4Q96JN8 1562 aa11.04□□□□□ -0.64
TDP1-209ENST00000554180 ESF1Q9H501 851 aaKnown RBP11.03□□□□□ -0.64
TDP1-209ENST00000554180 MROH2AA6NES4 1674 aa11.01□□□□□ -0.65
TDP1-209ENST00000554180 CLTCQ00610 1675 aaKnown RBP11.01□□□□□ -0.65
TDP1-209ENST00000554180 ERVK-7P63135 1459 aa11.01□□□□□ -0.65
TDP1-209ENST00000554180 MLECQ14165 292 aa11.01□□□□□ -0.65
TDP1-209ENST00000554180 CLTCL1P53675 1640 aa11.01□□□□□ -0.65
TDP1-209ENST00000554180 SPATA31E1Q6ZUB1 1445 aa11.01□□□□□ -0.65
TDP1-209ENST00000554180 SPATA31D1Q6ZQQ2 1576 aa11□□□□□ -0.65
TDP1-209ENST00000554180 PPP1R15AO75807 674 aaPredicted RBP11□□□□□ -0.65
TDP1-209ENST00000554180 L3MBTL2Q969R5 705 aa11□□□□□ -0.65
TDP1-209ENST00000554180 SLC52A1Q9NWF4 448 aa11□□□□□ -0.65
TDP1-209ENST00000554180 ZMYM3Q14202 1370 aa11□□□□□ -0.65
TDP1-209ENST00000554180 SYNMO15061 1565 aa10.99□□□□□ -0.65
TDP1-209ENST00000554180 PIK3C2BO00750 1634 aa10.99□□□□□ -0.65
TDP1-209ENST00000554180 PREX1Q8TCU6 1659 aa10.99□□□□□ -0.65
TDP1-209ENST00000554180 STAC3Q96MF2 364 aa10.99□□□□□ -0.65
TDP1-209ENST00000554180 ADGRB3O60242 1522 aa10.98□□□□□ -0.65
TDP1-209ENST00000554180 UHRF1BP1Q6BDS2 1440 aa10.97□□□□□ -0.65
TDP1-209ENST00000554180 UGGT1Q9NYU2 1555 aa10.97□□□□□ -0.65
TDP1-209ENST00000554180 FER1L4A9Z1Z3 1794 aa10.96□□□□□ -0.65
TDP1-209ENST00000554180 ADAMTSL3P82987 1691 aa10.95□□□□□ -0.66
TDP1-209ENST00000554180 TNRQ92752 1358 aa10.94□□□□□ -0.66
TDP1-209ENST00000554180 FBXO31Q5XUX0 539 aaPredicted RBP10.94□□□□□ -0.66
TDP1-209ENST00000554180 MYOM2P54296 1465 aa10.93□□□□□ -0.66
TDP1-209ENST00000554180 KIF1BO60333 1816 aa10.93□□□□□ -0.66
TDP1-209ENST00000554180 RPGRIP1LQ68CZ1 1315 aa10.93□□□□□ -0.66
TDP1-209ENST00000554180 DCAF11Q8TEB1 546 aa10.93□□□□□ -0.66
TDP1-209ENST00000554180 MADDQ8WXG6 1647 aa10.93□□□□□ -0.66
TDP1-209ENST00000554180 NLRP1Q9C000 1473 aa10.93□□□□□ -0.66
TDP1-209ENST00000554180 PRAG1Q86YV5 1406 aa10.92□□□□□ -0.66
TDP1-209ENST00000554180 IDI1Q13907 227 aa10.92□□□□□ -0.66
TDP1-209ENST00000554180 RGL3Q3MIN7 710 aa10.92□□□□□ -0.66
TDP1-209ENST00000554180 C3P01024 1663 aa10.92□□□□□ -0.66
TDP1-209ENST00000554180 RALGAPBQ86X10 1494 aa10.91□□□□□ -0.66
TDP1-209ENST00000554180 KDM5AP29375 1690 aaKnown RBP10.91□□□□□ -0.66
TDP1-209ENST00000554180 TMEM131LA2VDJ0 1609 aa10.91□□□□□ -0.66
TDP1-209ENST00000554180 NRXN1Q9ULB1 1477 aa10.9□□□□□ -0.66
TDP1-209ENST00000554180 CFAP65Q6ZU64 1925 aaKnown RBP10.9□□□□□ -0.67
TDP1-209ENST00000554180 NBPF8Q3BBV2 869 aa10.89□□□□□ -0.67
TDP1-209ENST00000554180 ZFYVE9O95405 1425 aa10.89□□□□□ -0.67
TDP1-209ENST00000554180 IFT172Q9UG01 1749 aa10.89□□□□□ -0.67
TDP1-209ENST00000554180 RIMS1Q86UR5 1692 aaKnown RBP10.89□□□□□ -0.67
TDP1-209ENST00000554180 A2ML1A8K2U0 1454 aa10.88□□□□□ -0.67
TDP1-209ENST00000554180 ZNF326Q5BKZ1 582 aaKnown RBP10.88□□□□□ -0.67
TDP1-209ENST00000554180 NEXMIFQ5QGS0 1516 aa10.88□□□□□ -0.67
TDP1-209ENST00000554180 GPRASP1Q5JY77 1395 aa10.88□□□□□ -0.67
TDP1-209ENST00000554180 CHGAP10645 457 aaKnown RBP10.87□□□□□ -0.67
TDP1-209ENST00000554180 KDM2AQ9Y2K7 1162 aa10.87□□□□□ -0.67
TDP1-209ENST00000554180 PPLO60437 1756 aa10.86□□□□□ -0.67
TDP1-209ENST00000554180 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms