RNA–Protein interactions for RNA: ENST00000554178.1

PTPN21-204, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 3

Gene PTPN21, Length 822 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-204ENST00000554178 HNRNPMP52272 730 aaKnown RBP eCLIP15.93■□□□□ 0.14
PTPN21-204ENST00000554178 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
PTPN21-204ENST00000554178 DNMT1P26358 1616 aaKnown RBP15.91■□□□□ 0.14
PTPN21-204ENST00000554178 PTPRKQ15262 1439 aa15.91■□□□□ 0.14
PTPN21-204ENST00000554178 PLA2R1Q13018 1463 aa15.9■□□□□ 0.14
PTPN21-204ENST00000554178 NEURL4Q96JN8 1562 aa15.89■□□□□ 0.13
PTPN21-204ENST00000554178 TCOF1Q13428 1488 aaKnown RBP15.89■□□□□ 0.13
PTPN21-204ENST00000554178 PLEKHH2Q8IVE3 1493 aa15.88■□□□□ 0.13
PTPN21-204ENST00000554178 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
PTPN21-204ENST00000554178 UBAP1LF5GYI3 381 aa15.87■□□□□ 0.13
PTPN21-204ENST00000554178 GGT6Q6P531 493 aa15.87■□□□□ 0.13
PTPN21-204ENST00000554178 EHBP1L1Q8N3D4 1523 aa15.87■□□□□ 0.13
PTPN21-204ENST00000554178 MED1Q15648 1581 aaPredicted RBP15.86■□□□□ 0.13
PTPN21-204ENST00000554178 CFDP1Q9UEE9 299 aaPredicted RBP15.85■□□□□ 0.13
PTPN21-204ENST00000554178 MTUS2Q5JR59 1369 aa15.85■□□□□ 0.13
PTPN21-204ENST00000554178 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
PTPN21-204ENST00000554178 KIAA1107Q9UPP5 1409 aa15.84■□□□□ 0.13
PTPN21-204ENST00000554178 CFAP65Q6ZU64 1925 aaKnown RBP15.84■□□□□ 0.13
PTPN21-204ENST00000554178 A2ML1A8K2U0 1454 aa15.84■□□□□ 0.13
PTPN21-204ENST00000554178 KDM5DQ9BY66 1539 aa15.82■□□□□ 0.12
PTPN21-204ENST00000554178 STRCP1A6NGW2 1772 aa15.81■□□□□ 0.12
PTPN21-204ENST00000554178 CEP152O94986 1710 aa15.8■□□□□ 0.12
PTPN21-204ENST00000554178 U3KPZ7 1027 aaPredicted RBP15.8■□□□□ 0.12
PTPN21-204ENST00000554178 CAMSAP2Q08AD1 1489 aa15.79■□□□□ 0.12
PTPN21-204ENST00000554178 MBD5Q9P267 1494 aa15.79■□□□□ 0.12
PTPN21-204ENST00000554178 IQGAP1P46940 1657 aa15.79■□□□□ 0.12
PTPN21-204ENST00000554178 VWDEQ8N2E2 1590 aa15.78■□□□□ 0.12
PTPN21-204ENST00000554178 PIP4K2BP78356 416 aa15.77■□□□□ 0.12
PTPN21-204ENST00000554178 PKD2Q13563 968 aa15.77■□□□□ 0.12
PTPN21-204ENST00000554178 CCDC141Q6ZP82 1450 aa15.77■□□□□ 0.11
PTPN21-204ENST00000554178 TNRQ92752 1358 aa15.76■□□□□ 0.11
PTPN21-204ENST00000554178 CPS1P31327 1500 aa15.76■□□□□ 0.11
PTPN21-204ENST00000554178 PZPP20742 1482 aa15.76■□□□□ 0.11
PTPN21-204ENST00000554178 ALKQ9UM73 1620 aa15.76■□□□□ 0.11
PTPN21-204ENST00000554178 FBXO31Q5XUX0 539 aaPredicted RBP15.75■□□□□ 0.11
PTPN21-204ENST00000554178 ZC3H13Q5T200 1668 aaKnown RBP15.73■□□□□ 0.11
PTPN21-204ENST00000554178 SHANK2Q9UPX8 1470 aa15.73■□□□□ 0.11
PTPN21-204ENST00000554178 RNF17Q9BXT8 1623 aaKnown RBP15.73■□□□□ 0.11
PTPN21-204ENST00000554178 HSPA1LP34931 641 aa15.73■□□□□ 0.11
PTPN21-204ENST00000554178 UGGT1Q9NYU2 1555 aa15.73■□□□□ 0.11
PTPN21-204ENST00000554178 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.73■□□□□ 0.11
PTPN21-204ENST00000554178 DEPDC5O75140 1603 aa15.72■□□□□ 0.11
PTPN21-204ENST00000554178 NCOA2Q15596 1464 aa15.72■□□□□ 0.11
PTPN21-204ENST00000554178 CEP162Q5TB80 1403 aa15.72■□□□□ 0.11
PTPN21-204ENST00000554178 RTEL1-TNFRSF6BF6WH68 1400 aa15.71■□□□□ 0.11
PTPN21-204ENST00000554178 KIF3BO15066 747 aa15.71■□□□□ 0.11
PTPN21-204ENST00000554178 SLC4A2P04920 1241 aa15.71■□□□□ 0.11
PTPN21-204ENST00000554178 FAM135AQ9P2D6 1515 aa15.71■□□□□ 0.11
PTPN21-204ENST00000554178 DHX29Q7Z478 1369 aaKnown RBP15.71■□□□□ 0.11
PTPN21-204ENST00000554178 XIRP1Q702N8 1843 aaKnown RBP15.71■□□□□ 0.1
PTPN21-204ENST00000554178 SYNMO15061 1565 aa15.7■□□□□ 0.1
PTPN21-204ENST00000554178 UBR1Q8IWV7 1749 aa15.7■□□□□ 0.1
PTPN21-204ENST00000554178 ARHGEF5Q12774 1597 aa15.7■□□□□ 0.1
PTPN21-204ENST00000554178 MROH1Q8NDA8 1641 aa15.68■□□□□ 0.1
PTPN21-204ENST00000554178 ABCC3O15438 1527 aa15.68■□□□□ 0.1
PTPN21-204ENST00000554178 NPHP4O75161 1426 aaPredicted RBP15.68■□□□□ 0.1
PTPN21-204ENST00000554178 EIF2AK4Q9P2K8 1649 aaKnown RBP15.67■□□□□ 0.1
PTPN21-204ENST00000554178 NLRP1Q9C000 1473 aa15.66■□□□□ 0.1
PTPN21-204ENST00000554178 CROCC2H7BZ55 1655 aa15.65■□□□□ 0.1
PTPN21-204ENST00000554178 WASHC2CQ9Y4E1 1318 aa15.65■□□□□ 0.1
PTPN21-204ENST00000554178 MAST1Q9Y2H9 1570 aa15.64■□□□□ 0.09
PTPN21-204ENST00000554178 MIA2Q96PC5 1412 aa15.63■□□□□ 0.09
PTPN21-204ENST00000554178 MED14O60244 1454 aa15.63■□□□□ 0.09
PTPN21-204ENST00000554178 ERVK-7P63135 1459 aa15.63■□□□□ 0.09
PTPN21-204ENST00000554178 TOM1O60784 492 aa15.62■□□□□ 0.09
PTPN21-204ENST00000554178 LRRC7Q96NW7 1537 aa15.62■□□□□ 0.09
PTPN21-204ENST00000554178 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
PTPN21-204ENST00000554178 ANKLE2Q86XL3 938 aa15.6■□□□□ 0.09
PTPN21-204ENST00000554178 PIK3C2BO00750 1634 aa15.6■□□□□ 0.09
PTPN21-204ENST00000554178 THEMISQ8N1K5 641 aaPredicted RBP15.56■□□□□ 0.08
PTPN21-204ENST00000554178 LRRC9Q6ZRR7 1453 aa15.56■□□□□ 0.08
PTPN21-204ENST00000554178 SETD1AO15047 1707 aaKnown RBP15.56■□□□□ 0.08
PTPN21-204ENST00000554178 PRDM15P57071 1507 aaPredicted RBP15.55■□□□□ 0.08
PTPN21-204ENST00000554178 SCAF11Q99590 1463 aaKnown RBP15.55■□□□□ 0.08
PTPN21-204ENST00000554178 MYO5BQ9ULV0 1848 aa15.54■□□□□ 0.08
PTPN21-204ENST00000554178 DUOX2Q9NRD8 1548 aa15.52■□□□□ 0.07
PTPN21-204ENST00000554178 ROBO1Q9Y6N7 1651 aa15.51■□□□□ 0.07
PTPN21-204ENST00000554178 CAPN15O75808 1086 aa15.51■□□□□ 0.07
PTPN21-204ENST00000554178 TSPY4P0CV99 314 aa15.51■□□□□ 0.07
PTPN21-204ENST00000554178 TSPY10P0CW01 314 aa15.51■□□□□ 0.07
PTPN21-204ENST00000554178 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
PTPN21-204ENST00000554178 SLIT1O75093 1534 aa15.5■□□□□ 0.07
PTPN21-204ENST00000554178 PTPN23Q9H3S7 1636 aa15.5■□□□□ 0.07
PTPN21-204ENST00000554178 ARHGAP23Q9P227 1491 aa15.49■□□□□ 0.07
PTPN21-204ENST00000554178 MYOM3Q5VTT5 1437 aa15.49■□□□□ 0.07
PTPN21-204ENST00000554178 RSPH4AQ5TD94 716 aa15.47■□□□□ 0.07
PTPN21-204ENST00000554178 GCC2Q8IWJ2 1684 aa15.46■□□□□ 0.07
PTPN21-204ENST00000554178 MAP3K1Q13233 1512 aa15.46■□□□□ 0.07
PTPN21-204ENST00000554178 KIF15Q9NS87 1388 aa15.46■□□□□ 0.07
PTPN21-204ENST00000554178 PHLPP1O60346 1717 aa15.46■□□□□ 0.06
PTPN21-204ENST00000554178 KDM5AP29375 1690 aaKnown RBP15.45■□□□□ 0.06
PTPN21-204ENST00000554178 LTKP29376 864 aa15.45■□□□□ 0.06
PTPN21-204ENST00000554178 KANK4Q5T7N3 995 aaPredicted RBP15.45■□□□□ 0.06
PTPN21-204ENST00000554178 EFCAB6Q5THR3 1501 aa15.44■□□□□ 0.06
PTPN21-204ENST00000554178 ERBINQ96RT1 1412 aa15.43■□□□□ 0.06
PTPN21-204ENST00000554178 DSG3P32926 999 aa15.42■□□□□ 0.06
PTPN21-204ENST00000554178 TXNDC2Q86VQ3 553 aa15.42■□□□□ 0.06
PTPN21-204ENST00000554178 RBM33Q96EV2 1170 aaKnown RBP15.42■□□□□ 0.06
PTPN21-204ENST00000554178 ADGRB3O60242 1522 aa15.42■□□□□ 0.06
PTPN21-204ENST00000554178 NWD1Q149M9 1564 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms