RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 UBAP1LF5GYI3 381 aa18.67■□□□□ 0.58
TUBB3-204ENST00000554116 NCOA2Q15596 1464 aa18.66■□□□□ 0.58
TUBB3-204ENST00000554116 CAMSAP2Q08AD1 1489 aa18.65■□□□□ 0.58
TUBB3-204ENST00000554116 KIF3BO15066 747 aa18.65■□□□□ 0.58
TUBB3-204ENST00000554116 CCDC141Q6ZP82 1450 aa18.65■□□□□ 0.58
TUBB3-204ENST00000554116 PZPP20742 1482 aa18.64■□□□□ 0.57
TUBB3-204ENST00000554116 POLR1AO95602 1720 aaPredicted RBP18.63■□□□□ 0.57
TUBB3-204ENST00000554116 TNRQ92752 1358 aa18.62■□□□□ 0.57
TUBB3-204ENST00000554116 KDM5DQ9BY66 1539 aa18.62■□□□□ 0.57
TUBB3-204ENST00000554116 ARHGEF5Q12774 1597 aa18.6■□□□□ 0.57
TUBB3-204ENST00000554116 FAM135AQ9P2D6 1515 aa18.59■□□□□ 0.57
TUBB3-204ENST00000554116 MIA2Q96PC5 1412 aa18.58■□□□□ 0.57
TUBB3-204ENST00000554116 ALKQ9UM73 1620 aa18.58■□□□□ 0.56
TUBB3-204ENST00000554116 VWDEQ8N2E2 1590 aa18.58■□□□□ 0.56
TUBB3-204ENST00000554116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.57■□□□□ 0.56
TUBB3-204ENST00000554116 SHANK2Q9UPX8 1470 aa18.57■□□□□ 0.56
TUBB3-204ENST00000554116 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
TUBB3-204ENST00000554116 RSPH4AQ5TD94 716 aa18.56■□□□□ 0.56
TUBB3-204ENST00000554116 RNF17Q9BXT8 1623 aaKnown RBP18.55■□□□□ 0.56
TUBB3-204ENST00000554116 MED14O60244 1454 aa18.54■□□□□ 0.56
TUBB3-204ENST00000554116 MROH1Q8NDA8 1641 aa18.54■□□□□ 0.56
TUBB3-204ENST00000554116 CPS1P31327 1500 aa18.54■□□□□ 0.56
TUBB3-204ENST00000554116 LRRC9Q6ZRR7 1453 aa18.53■□□□□ 0.56
TUBB3-204ENST00000554116 NLRP1Q9C000 1473 aa18.53■□□□□ 0.56
TUBB3-204ENST00000554116 STRCP1A6NGW2 1772 aa18.53■□□□□ 0.56
TUBB3-204ENST00000554116 HSPA1LP34931 641 aa18.53■□□□□ 0.56
TUBB3-204ENST00000554116 MED1Q15648 1581 aaPredicted RBP18.53■□□□□ 0.56
TUBB3-204ENST00000554116 MAST1Q9Y2H9 1570 aa18.53■□□□□ 0.56
TUBB3-204ENST00000554116 DEPDC5O75140 1603 aa18.52■□□□□ 0.56
TUBB3-204ENST00000554116 UGGT1Q9NYU2 1555 aa18.52■□□□□ 0.56
TUBB3-204ENST00000554116 ABCC3O15438 1527 aa18.52■□□□□ 0.56
TUBB3-204ENST00000554116 KANK4Q5T7N3 995 aaPredicted RBP18.51■□□□□ 0.55
TUBB3-204ENST00000554116 ANKLE2Q86XL3 938 aa18.51■□□□□ 0.55
TUBB3-204ENST00000554116 THEMISQ8N1K5 641 aaPredicted RBP18.5■□□□□ 0.55
TUBB3-204ENST00000554116 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
TUBB3-204ENST00000554116 NPHP4O75161 1426 aaPredicted RBP18.49■□□□□ 0.55
TUBB3-204ENST00000554116 TOM1O60784 492 aa18.49■□□□□ 0.55
TUBB3-204ENST00000554116 TSPY4P0CV99 314 aa18.49■□□□□ 0.55
TUBB3-204ENST00000554116 TSPY10P0CW01 314 aa18.49■□□□□ 0.55
TUBB3-204ENST00000554116 LOC105371045A0A1W2PR82 267 aa18.48■□□□□ 0.55
TUBB3-204ENST00000554116 PIP4K2BP78356 416 aa18.48■□□□□ 0.55
TUBB3-204ENST00000554116 CFAP65Q6ZU64 1925 aaKnown RBP18.48■□□□□ 0.55
TUBB3-204ENST00000554116 VPS8Q8N3P4 1428 aa18.48■□□□□ 0.55
TUBB3-204ENST00000554116 IQGAP1P46940 1657 aa18.47■□□□□ 0.55
TUBB3-204ENST00000554116 ZC3H13Q5T200 1668 aaKnown RBP18.47■□□□□ 0.55
TUBB3-204ENST00000554116 ERVK-7P63135 1459 aa18.46■□□□□ 0.55
TUBB3-204ENST00000554116 EIF2AK4Q9P2K8 1649 aaKnown RBP18.46■□□□□ 0.55
TUBB3-204ENST00000554116 CEP152O94986 1710 aa18.46■□□□□ 0.55
TUBB3-204ENST00000554116 UBR1Q8IWV7 1749 aa18.44■□□□□ 0.54
TUBB3-204ENST00000554116 MAP3K1Q13233 1512 aa18.43■□□□□ 0.54
TUBB3-204ENST00000554116 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
TUBB3-204ENST00000554116 MYOM3Q5VTT5 1437 aa18.41■□□□□ 0.54
TUBB3-204ENST00000554116 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
TUBB3-204ENST00000554116 LTKP29376 864 aa18.39■□□□□ 0.53
TUBB3-204ENST00000554116 ARHGAP23Q9P227 1491 aa18.39■□□□□ 0.53
TUBB3-204ENST00000554116 DUOX2Q9NRD8 1548 aa18.39■□□□□ 0.53
TUBB3-204ENST00000554116 XIRP1Q702N8 1843 aaKnown RBP18.38■□□□□ 0.53
TUBB3-204ENST00000554116 ABCC5O15440 1437 aa18.37■□□□□ 0.53
TUBB3-204ENST00000554116 SLIT1O75093 1534 aa18.36■□□□□ 0.53
TUBB3-204ENST00000554116 PRDM15P57071 1507 aaPredicted RBP18.36■□□□□ 0.53
TUBB3-204ENST00000554116 ARHGAP31Q2M1Z3 1444 aa18.36■□□□□ 0.53
TUBB3-204ENST00000554116 CROCC2H7BZ55 1655 aa18.35■□□□□ 0.53
TUBB3-204ENST00000554116 SYNMO15061 1565 aa18.34■□□□□ 0.53
TUBB3-204ENST00000554116 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
TUBB3-204ENST00000554116 KIF15Q9NS87 1388 aa18.33■□□□□ 0.53
TUBB3-204ENST00000554116 PIK3C2BO00750 1634 aa18.32■□□□□ 0.52
TUBB3-204ENST00000554116 RRP7BPQ9NSQ0 103 aa18.31■□□□□ 0.52
TUBB3-204ENST00000554116 PTPN23Q9H3S7 1636 aa18.31■□□□□ 0.52
TUBB3-204ENST00000554116 ERBINQ96RT1 1412 aa18.3■□□□□ 0.52
TUBB3-204ENST00000554116 TXNDC2Q86VQ3 553 aa18.29■□□□□ 0.52
TUBB3-204ENST00000554116 DAPK1P53355 1430 aa18.28■□□□□ 0.52
TUBB3-204ENST00000554116 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
TUBB3-204ENST00000554116 TMEM2Q9UHN6 1383 aa18.27■□□□□ 0.51
TUBB3-204ENST00000554116 RGS17Q9UGC6 210 aaPredicted RBP18.26■□□□□ 0.51
TUBB3-204ENST00000554116 LMTK2Q8IWU2 1503 aa18.25■□□□□ 0.51
TUBB3-204ENST00000554116 IDI1Q13907 227 aa18.25■□□□□ 0.51
TUBB3-204ENST00000554116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.51
TUBB3-204ENST00000554116 TET3O43151 1660 aa18.25■□□□□ 0.51
TUBB3-204ENST00000554116 FGD6Q6ZV73 1430 aa18.24■□□□□ 0.51
TUBB3-204ENST00000554116 KDM5AP29375 1690 aaKnown RBP18.24■□□□□ 0.51
TUBB3-204ENST00000554116 NOS1P29475 1434 aa18.22■□□□□ 0.51
TUBB3-204ENST00000554116 CHIC2Q9UKJ5 165 aa18.21■□□□□ 0.51
TUBB3-204ENST00000554116 EFCAB6Q5THR3 1501 aa18.2■□□□□ 0.5
TUBB3-204ENST00000554116 EID1Q9Y6B2 187 aa18.19■□□□□ 0.5
TUBB3-204ENST00000554116 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
TUBB3-204ENST00000554116 FAM135BQ49AJ0 1406 aa18.18■□□□□ 0.5
TUBB3-204ENST00000554116 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
TUBB3-204ENST00000554116 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
TUBB3-204ENST00000554116 ADGRL2O95490 1459 aa18.16■□□□□ 0.5
TUBB3-204ENST00000554116 KCNA6P17658 529 aa18.16■□□□□ 0.5
TUBB3-204ENST00000554116 KANK1Q14678 1352 aa18.16■□□□□ 0.5
TUBB3-204ENST00000554116 ANKRD30AQ9BXX3 1397 aa18.16■□□□□ 0.5
TUBB3-204ENST00000554116 ADGRB3O60242 1522 aa18.15■□□□□ 0.5
TUBB3-204ENST00000554116 MYO5BQ9ULV0 1848 aa18.15■□□□□ 0.5
TUBB3-204ENST00000554116 NWD1Q149M9 1564 aa18.14■□□□□ 0.49
TUBB3-204ENST00000554116 ROBO1Q9Y6N7 1651 aa18.13■□□□□ 0.49
TUBB3-204ENST00000554116 STAG3Q9UJ98 1225 aa18.12■□□□□ 0.49
TUBB3-204ENST00000554116 ZFYVE9O95405 1425 aa18.12■□□□□ 0.49
TUBB3-204ENST00000554116 POTEAQ6S8J7 498 aa18.1■□□□□ 0.49
TUBB3-204ENST00000554116 PROSER2Q86WR7 435 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms