RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 SETD5Q9C0A6 1442 aa20.39■□□□□ 0.85
PSMC6-205ENST00000553899 KIF3BO15066 747 aa20.37■□□□□ 0.85
PSMC6-205ENST00000553899 PRDM15P57071 1507 aaPredicted RBP20.36■□□□□ 0.85
PSMC6-205ENST00000553899 UNC13BO14795 1591 aa20.35■□□□□ 0.85
PSMC6-205ENST00000553899 ARID4BQ4LE39 1312 aaPredicted RBP20.34■□□□□ 0.85
PSMC6-205ENST00000553899 KDM5DQ9BY66 1539 aa20.34■□□□□ 0.85
PSMC6-205ENST00000553899 VWDEQ8N2E2 1590 aa20.33■□□□□ 0.84
PSMC6-205ENST00000553899 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
PSMC6-205ENST00000553899 MROH1Q8NDA8 1641 aa20.32■□□□□ 0.84
PSMC6-205ENST00000553899 CNTLNQ9NXG0 1405 aa20.31■□□□□ 0.84
PSMC6-205ENST00000553899 ADAMTSL3P82987 1691 aa20.31■□□□□ 0.84
PSMC6-205ENST00000553899 KANK1Q14678 1352 aa20.31■□□□□ 0.84
PSMC6-205ENST00000553899 LMTK2Q8IWU2 1503 aa20.29■□□□□ 0.84
PSMC6-205ENST00000553899 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
PSMC6-205ENST00000553899 IQGAP3Q86VI3 1631 aa20.27■□□□□ 0.84
PSMC6-205ENST00000553899 MROH2AA6NES4 1674 aa20.27■□□□□ 0.84
PSMC6-205ENST00000553899 GGT6Q6P531 493 aa20.27■□□□□ 0.84
PSMC6-205ENST00000553899 WASHC2CQ9Y4E1 1318 aa20.25■□□□□ 0.83
PSMC6-205ENST00000553899 FER1L4A9Z1Z3 1794 aa20.24■□□□□ 0.83
PSMC6-205ENST00000553899 ABCC3O15438 1527 aa20.24■□□□□ 0.83
PSMC6-205ENST00000553899 NUP155O75694 1391 aa20.23■□□□□ 0.83
PSMC6-205ENST00000553899 ARHGAP31Q2M1Z3 1444 aa20.23■□□□□ 0.83
PSMC6-205ENST00000553899 ESF1Q9H501 851 aaKnown RBP20.23■□□□□ 0.83
PSMC6-205ENST00000553899 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
PSMC6-205ENST00000553899 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
PSMC6-205ENST00000553899 TET3O43151 1660 aa20.21■□□□□ 0.83
PSMC6-205ENST00000553899 MADDQ8WXG6 1647 aa20.2■□□□□ 0.82
PSMC6-205ENST00000553899 CLTCQ00610 1675 aaKnown RBP20.19■□□□□ 0.82
PSMC6-205ENST00000553899 MLECQ14165 292 aa20.19■□□□□ 0.82
PSMC6-205ENST00000553899 CAMSAP1Q5T5Y3 1602 aa20.18■□□□□ 0.82
PSMC6-205ENST00000553899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.18■□□□□ 0.82
PSMC6-205ENST00000553899 EFCAB6Q5THR3 1501 aa20.17■□□□□ 0.82
PSMC6-205ENST00000553899 CEP152O94986 1710 aa20.17■□□□□ 0.82
PSMC6-205ENST00000553899 ZMYM3Q14202 1370 aa20.17■□□□□ 0.82
PSMC6-205ENST00000553899 PZPP20742 1482 aa20.17■□□□□ 0.82
PSMC6-205ENST00000553899 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
PSMC6-205ENST00000553899 KDM4FA0A1W2PPD8 638 aa20.14■□□□□ 0.81
PSMC6-205ENST00000553899 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
PSMC6-205ENST00000553899 RIMS1Q86UR5 1692 aaKnown RBP20.13■□□□□ 0.81
PSMC6-205ENST00000553899 NPATQ14207 1427 aa20.13■□□□□ 0.81
PSMC6-205ENST00000553899 PTPRMP28827 1452 aa20.12■□□□□ 0.81
PSMC6-205ENST00000553899 MPHOSPH9Q99550 1183 aa20.12■□□□□ 0.81
PSMC6-205ENST00000553899 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
PSMC6-205ENST00000553899 C3P01024 1663 aa20.12■□□□□ 0.81
PSMC6-205ENST00000553899 E9PCH4 1651 aa20.1■□□□□ 0.81
PSMC6-205ENST00000553899 SETD1BQ9UPS6 1966 aaKnown RBP20.1■□□□□ 0.81
PSMC6-205ENST00000553899 SPATA31D1Q6ZQQ2 1576 aa20.08■□□□□ 0.8
PSMC6-205ENST00000553899 PTPRTO14522 1441 aa20.07■□□□□ 0.8
PSMC6-205ENST00000553899 NOS1P29475 1434 aa20.06■□□□□ 0.8
PSMC6-205ENST00000553899 PREX1Q8TCU6 1659 aa20.06■□□□□ 0.8
PSMC6-205ENST00000553899 PKD2Q13563 968 aa20.05■□□□□ 0.8
PSMC6-205ENST00000553899 ERVK-7P63135 1459 aa20.04■□□□□ 0.8
PSMC6-205ENST00000553899 SPHKAPQ2M3C7 1700 aa20.02■□□□□ 0.8
PSMC6-205ENST00000553899 SLC52A1Q9NWF4 448 aa20.02■□□□□ 0.8
PSMC6-205ENST00000553899 TRPM2O94759 1503 aa20.01■□□□□ 0.79
PSMC6-205ENST00000553899 NLRP1Q9C000 1473 aa19.99■□□□□ 0.79
PSMC6-205ENST00000553899 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
PSMC6-205ENST00000553899 KDM5AP29375 1690 aaKnown RBP19.99■□□□□ 0.79
PSMC6-205ENST00000553899 CLSPNQ9HAW4 1339 aa19.99■□□□□ 0.79
PSMC6-205ENST00000553899 TNRQ92752 1358 aa19.98■□□□□ 0.79
PSMC6-205ENST00000553899 CEBPAP49715 358 aaPredicted RBP19.98■□□□□ 0.79
PSMC6-205ENST00000553899 PIK3C2BO00750 1634 aa19.98■□□□□ 0.79
PSMC6-205ENST00000553899 CFAP65Q6ZU64 1925 aaKnown RBP19.98■□□□□ 0.79
PSMC6-205ENST00000553899 ANKRD30BQ9BXX2 1392 aa19.97■□□□□ 0.79
PSMC6-205ENST00000553899 FBXO31Q5XUX0 539 aaPredicted RBP19.97■□□□□ 0.79
PSMC6-205ENST00000553899 PLA2R1Q13018 1463 aa19.97■□□□□ 0.79
PSMC6-205ENST00000553899 SYNMO15061 1565 aa19.96■□□□□ 0.79
PSMC6-205ENST00000553899 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
PSMC6-205ENST00000553899 ZNF142P52746 1687 aaPredicted RBP19.93■□□□□ 0.78
PSMC6-205ENST00000553899 MYO3AQ8NEV4 1616 aa19.91■□□□□ 0.78
PSMC6-205ENST00000553899 CCDC144AA2RUR9 1427 aa19.91■□□□□ 0.78
PSMC6-205ENST00000553899 A2ML1A8K2U0 1454 aa19.91■□□□□ 0.78
PSMC6-205ENST00000553899 IDI1Q13907 227 aa19.89■□□□□ 0.77
PSMC6-205ENST00000553899 UHRF1BP1Q6BDS2 1440 aa19.89■□□□□ 0.77
PSMC6-205ENST00000553899 FOXD1Q16676 465 aa19.88■□□□□ 0.77
PSMC6-205ENST00000553899 CLTCL1P53675 1640 aa19.87■□□□□ 0.77
PSMC6-205ENST00000553899 CEP170BQ9Y4F5 1589 aaPredicted RBP19.87■□□□□ 0.77
PSMC6-205ENST00000553899 KIF1BO60333 1816 aa19.87■□□□□ 0.77
PSMC6-205ENST00000553899 UBR1Q8IWV7 1749 aa19.85■□□□□ 0.77
PSMC6-205ENST00000553899 TMEM131LA2VDJ0 1609 aa19.85■□□□□ 0.77
PSMC6-205ENST00000553899 ADGRB3O60242 1522 aa19.85■□□□□ 0.77
PSMC6-205ENST00000553899 UGGT1Q9NYU2 1555 aa19.84■□□□□ 0.77
PSMC6-205ENST00000553899 THEMISQ8N1K5 641 aaPredicted RBP19.84■□□□□ 0.77
PSMC6-205ENST00000553899 STAC3Q96MF2 364 aa19.82■□□□□ 0.76
PSMC6-205ENST00000553899 PHF23Q9BUL5 403 aaPredicted RBP19.82■□□□□ 0.76
PSMC6-205ENST00000553899 SPATA31E1Q6ZUB1 1445 aa19.82■□□□□ 0.76
PSMC6-205ENST00000553899 LMTK3Q96Q04 1460 aa19.81■□□□□ 0.76
PSMC6-205ENST00000553899 RPGRIP1LQ68CZ1 1315 aa19.8■□□□□ 0.76
PSMC6-205ENST00000553899 PLPPR3Q6T4P5 718 aa19.8■□□□□ 0.76
PSMC6-205ENST00000553899 SLIT1O75093 1534 aa19.8■□□□□ 0.76
PSMC6-205ENST00000553899 HDGFP51858 240 aaKnown RBP19.78■□□□□ 0.76
PSMC6-205ENST00000553899 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
PSMC6-205ENST00000553899 TIMELESSQ9UNS1 1208 aa19.78■□□□□ 0.76
PSMC6-205ENST00000553899 ARHGAP23Q9P227 1491 aa19.78■□□□□ 0.76
PSMC6-205ENST00000553899 STAG3Q9UJ98 1225 aa19.77■□□□□ 0.76
PSMC6-205ENST00000553899 TMEM2Q9UHN6 1383 aa19.76■□□□□ 0.75
PSMC6-205ENST00000553899 MYO5BQ9ULV0 1848 aa19.75■□□□□ 0.75
PSMC6-205ENST00000553899 ZFYVE9O95405 1425 aa19.75■□□□□ 0.75
PSMC6-205ENST00000553899 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.74■□□□□ 0.75
PSMC6-205ENST00000553899 IFT172Q9UG01 1749 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms