RNA–Protein interactions for RNA: ENST00000553778.6

CFAP54-204, Transcript of cilia and flagella associated protein 54, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene CFAP54, Length 1,967 nt, Biotype non stop decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-204ENST00000553778 RRBP1Q9P2E9 1410 aaKnown RBP13.92□□□□□ -0.18
CFAP54-204ENST00000553778 DIP2CQ9Y2E4 1556 aa13.92□□□□□ -0.18
CFAP54-204ENST00000553778 INO80Q9ULG1 1556 aaPredicted RBP13.91□□□□□ -0.18
CFAP54-204ENST00000553778 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.18
CFAP54-204ENST00000553778 ABCA6Q8N139 1617 aa13.9□□□□□ -0.18
CFAP54-204ENST00000553778 MLECQ14165 292 aa13.9□□□□□ -0.18
CFAP54-204ENST00000553778 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
CFAP54-204ENST00000553778 A2MP01023 1474 aa13.9□□□□□ -0.19
CFAP54-204ENST00000553778 DHX29Q7Z478 1369 aaKnown RBP13.89□□□□□ -0.19
CFAP54-204ENST00000553778 CCER2I3L3R5 266 aa13.89□□□□□ -0.19
CFAP54-204ENST00000553778 MAST1Q9Y2H9 1570 aa13.89□□□□□ -0.19
CFAP54-204ENST00000553778 SHANK2Q9UPX8 1470 aa13.89□□□□□ -0.19
CFAP54-204ENST00000553778 ANKRD30AQ9BXX3 1397 aa13.89□□□□□ -0.19
CFAP54-204ENST00000553778 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
CFAP54-204ENST00000553778 REREQ9P2R6 1566 aa13.88□□□□□ -0.19
CFAP54-204ENST00000553778 ADGBQ8N7X0 1667 aa13.86□□□□□ -0.19
CFAP54-204ENST00000553778 KIF3BO15066 747 aa13.85□□□□□ -0.19
CFAP54-204ENST00000553778 GGT6Q6P531 493 aa13.85□□□□□ -0.19
CFAP54-204ENST00000553778 CROCC2H7BZ55 1655 aa13.85□□□□□ -0.19
CFAP54-204ENST00000553778 KIF15Q9NS87 1388 aa13.85□□□□□ -0.19
CFAP54-204ENST00000553778 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
CFAP54-204ENST00000553778 AGLP35573 1532 aa13.85□□□□□ -0.19
CFAP54-204ENST00000553778 ESF1Q9H501 851 aaKnown RBP13.85□□□□□ -0.19
CFAP54-204ENST00000553778 PTPRKQ15262 1439 aa13.84□□□□□ -0.19
CFAP54-204ENST00000553778 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.19
CFAP54-204ENST00000553778 PLXNC1O60486 1568 aa13.83□□□□□ -0.2
CFAP54-204ENST00000553778 SIGLEC1Q9BZZ2 1709 aa13.82□□□□□ -0.2
CFAP54-204ENST00000553778 DUOX2Q9NRD8 1548 aa13.82□□□□□ -0.2
CFAP54-204ENST00000553778 ADGRL2O95490 1459 aa13.82□□□□□ -0.2
CFAP54-204ENST00000553778 ROCK1Q13464 1354 aa13.82□□□□□ -0.2
CFAP54-204ENST00000553778 BCORL1Q5H9F3 1711 aa13.82□□□□□ -0.2
CFAP54-204ENST00000553778 PPP6R1Q9UPN7 881 aa13.82□□□□□ -0.2
CFAP54-204ENST00000553778 ERBINQ96RT1 1412 aa13.79□□□□□ -0.2
CFAP54-204ENST00000553778 NOP58Q9Y2X3 529 aaKnown RBP13.79□□□□□ -0.2
CFAP54-204ENST00000553778 ADAMTSL3P82987 1691 aa13.78□□□□□ -0.2
CFAP54-204ENST00000553778 ANKRD50Q9ULJ7 1429 aa13.77□□□□□ -0.21
CFAP54-204ENST00000553778 WASHC2CQ9Y4E1 1318 aa13.77□□□□□ -0.21
CFAP54-204ENST00000553778 PLPPR3Q6T4P5 718 aa13.76□□□□□ -0.21
CFAP54-204ENST00000553778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
CFAP54-204ENST00000553778 MADDQ8WXG6 1647 aa13.75□□□□□ -0.21
CFAP54-204ENST00000553778 EIF2AK4Q9P2K8 1649 aaKnown RBP13.75□□□□□ -0.21
CFAP54-204ENST00000553778 CNTLNQ9NXG0 1405 aa13.74□□□□□ -0.21
CFAP54-204ENST00000553778 PTPRMP28827 1452 aa13.73□□□□□ -0.21
CFAP54-204ENST00000553778 PPP1R15AO75807 674 aaPredicted RBP13.73□□□□□ -0.21
CFAP54-204ENST00000553778 KANK1Q14678 1352 aa13.73□□□□□ -0.21
CFAP54-204ENST00000553778 FER1L4A9Z1Z3 1794 aa13.73□□□□□ -0.21
CFAP54-204ENST00000553778 ZMYM3Q14202 1370 aa13.72□□□□□ -0.21
CFAP54-204ENST00000553778 RIMS1Q86UR5 1692 aaKnown RBP13.72□□□□□ -0.21
CFAP54-204ENST00000553778 CEBPAP49715 358 aaPredicted RBP13.72□□□□□ -0.21
CFAP54-204ENST00000553778 PPP4R2Q9NY27 417 aa13.72□□□□□ -0.21
CFAP54-204ENST00000553778 NAIPQ13075 1403 aa13.71□□□□□ -0.22
CFAP54-204ENST00000553778 C11orf95C9JLR9 678 aaPredicted RBP13.71□□□□□ -0.22
CFAP54-204ENST00000553778 HFM1A2PYH4 1435 aa13.7□□□□□ -0.22
CFAP54-204ENST00000553778 RNF17Q9BXT8 1623 aaKnown RBP13.7□□□□□ -0.22
CFAP54-204ENST00000553778 RTL5Q5HYW3 569 aaPredicted RBP13.69□□□□□ -0.22
CFAP54-204ENST00000553778 TIMELESSQ9UNS1 1208 aa13.69□□□□□ -0.22
CFAP54-204ENST00000553778 KDM5DQ9BY66 1539 aa13.68□□□□□ -0.22
CFAP54-204ENST00000553778 FAM135AQ9P2D6 1515 aa13.68□□□□□ -0.22
CFAP54-204ENST00000553778 CLTCQ00610 1675 aaKnown RBP13.68□□□□□ -0.22
CFAP54-204ENST00000553778 ANP32CO43423 234 aa13.67□□□□□ -0.22
CFAP54-204ENST00000553778 NUP155O75694 1391 aa13.67□□□□□ -0.22
CFAP54-204ENST00000553778 PRDM15P57071 1507 aaPredicted RBP13.66□□□□□ -0.22
CFAP54-204ENST00000553778 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
CFAP54-204ENST00000553778 TRIM52Q96A61 297 aa13.66□□□□□ -0.22
CFAP54-204ENST00000553778 DEPDC5O75140 1603 aa13.66□□□□□ -0.22
CFAP54-204ENST00000553778 MROH1Q8NDA8 1641 aa13.66□□□□□ -0.22
CFAP54-204ENST00000553778 USP35Q9P2H5 1018 aa13.65□□□□□ -0.22
CFAP54-204ENST00000553778 SETD5Q9C0A6 1442 aa13.65□□□□□ -0.22
CFAP54-204ENST00000553778 MROH2AA6NES4 1674 aa13.65□□□□□ -0.22
CFAP54-204ENST00000553778 ABCC3O15438 1527 aa13.64□□□□□ -0.23
CFAP54-204ENST00000553778 ZC3H13Q5T200 1668 aaKnown RBP13.64□□□□□ -0.23
CFAP54-204ENST00000553778 GCC2Q8IWJ2 1684 aa13.64□□□□□ -0.23
CFAP54-204ENST00000553778 DDX10Q13206 875 aaKnown RBP13.63□□□□□ -0.23
CFAP54-204ENST00000553778 FBXO31Q5XUX0 539 aaPredicted RBP13.63□□□□□ -0.23
CFAP54-204ENST00000553778 C3P01024 1663 aa13.63□□□□□ -0.23
CFAP54-204ENST00000553778 NBR1Q14596 966 aa13.62□□□□□ -0.23
CFAP54-204ENST00000553778 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
CFAP54-204ENST00000553778 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
CFAP54-204ENST00000553778 UNC13BO14795 1591 aa13.61□□□□□ -0.23
CFAP54-204ENST00000553778 VWDEQ8N2E2 1590 aa13.61□□□□□ -0.23
CFAP54-204ENST00000553778 LMTK2Q8IWU2 1503 aa13.61□□□□□ -0.23
CFAP54-204ENST00000553778 PZPP20742 1482 aa13.61□□□□□ -0.23
CFAP54-204ENST00000553778 NPATQ14207 1427 aa13.61□□□□□ -0.23
CFAP54-204ENST00000553778 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
CFAP54-204ENST00000553778 IPO9Q96P70 1041 aaKnown RBP13.61□□□□□ -0.23
CFAP54-204ENST00000553778 CEP152O94986 1710 aa13.6□□□□□ -0.23
CFAP54-204ENST00000553778 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
CFAP54-204ENST00000553778 RAB3GAP2Q9H2M9 1393 aa13.59□□□□□ -0.23
CFAP54-204ENST00000553778 SETD1BQ9UPS6 1966 aaKnown RBP13.59□□□□□ -0.23
CFAP54-204ENST00000553778 CAMSAP1Q5T5Y3 1602 aa13.59□□□□□ -0.23
CFAP54-204ENST00000553778 SLC4A1APQ9BWU0 796 aaKnown RBP13.58□□□□□ -0.24
CFAP54-204ENST00000553778 ANP32AP39687 249 aaKnown RBP13.58□□□□□ -0.24
CFAP54-204ENST00000553778 TNRQ92752 1358 aa13.57□□□□□ -0.24
CFAP54-204ENST00000553778 IQGAP3Q86VI3 1631 aa13.57□□□□□ -0.24
CFAP54-204ENST00000553778 UHRF1BP1Q6BDS2 1440 aa13.57□□□□□ -0.24
CFAP54-204ENST00000553778 EFCAB6Q5THR3 1501 aa13.55□□□□□ -0.24
CFAP54-204ENST00000553778 MPHOSPH9Q99550 1183 aa13.55□□□□□ -0.24
CFAP54-204ENST00000553778 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
CFAP54-204ENST00000553778 TET3O43151 1660 aa13.55□□□□□ -0.24
CFAP54-204ENST00000553778 PKD2Q13563 968 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms