RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 ITGBL1O95965 494 aaPredicted RBP9.33□□□□□ -0.92
LINC00648-201ENST00000553747 MFSD10Q14728 455 aa9.33□□□□□ -0.92
LINC00648-201ENST00000553747 WBP1LQ9NX94 342 aa9.33□□□□□ -0.92
LINC00648-201ENST00000553747 SEPT9Q9UHD8 586 aaPredicted RBP9.33□□□□□ -0.92
LINC00648-201ENST00000553747 SOWAHBA6NEL2 793 aa9.32□□□□□ -0.92
LINC00648-201ENST00000553747 TYW1BQ6NUM6 668 aa9.32□□□□□ -0.92
LINC00648-201ENST00000553747 Q6ZNB5 142 aa9.32□□□□□ -0.92
LINC00648-201ENST00000553747 ZFRQ96KR1 1074 aaKnown RBP9.32□□□□□ -0.92
LINC00648-201ENST00000553747 AMER1Q5JTC6 1135 aaPredicted RBP9.3□□□□□ -0.92
LINC00648-201ENST00000553747 CADPS2Q86UW7 1296 aa9.3□□□□□ -0.92
LINC00648-201ENST00000553747 PHF14O94880 888 aa9.29□□□□□ -0.92
LINC00648-201ENST00000553747 LAPTM4BQ86VI4 370 aa9.28□□□□□ -0.92
LINC00648-201ENST00000553747 FBXW7Q969H0 707 aa9.28□□□□□ -0.92
LINC00648-201ENST00000553747 KCNC4Q03721 635 aa9.27□□□□□ -0.93
LINC00648-201ENST00000553747 C6orf132Q5T0Z8 1188 aa9.27□□□□□ -0.93
LINC00648-201ENST00000553747 RBM33Q96EV2 1170 aaKnown RBP9.27□□□□□ -0.93
LINC00648-201ENST00000553747 DPYSL4O14531 572 aa9.24□□□□□ -0.93
LINC00648-201ENST00000553747 HPS5Q9UPZ3 1129 aa9.24□□□□□ -0.93
LINC00648-201ENST00000553747 TRIM6-TRIM34B2RNG4 842 aa9.23□□□□□ -0.93
LINC00648-201ENST00000553747 DCAF8L2P0C7V8 631 aa9.23□□□□□ -0.93
LINC00648-201ENST00000553747 NYAP1Q6ZVC0 841 aa9.22□□□□□ -0.93
LINC00648-201ENST00000553747 DDX12PQ92771 950 aa9.22□□□□□ -0.93
LINC00648-201ENST00000553747 RTN4Q9NQC3 1192 aaKnown RBP9.22□□□□□ -0.93
LINC00648-201ENST00000553747 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.22□□□□□ -0.93
LINC00648-201ENST00000553747 FAM98CQ17RN3 349 aaKnown RBP9.21□□□□□ -0.94
LINC00648-201ENST00000553747 EPAS1Q99814 870 aa9.21□□□□□ -0.94
LINC00648-201ENST00000553747 TSR3Q9UJK0 312 aaKnown RBP9.21□□□□□ -0.94
LINC00648-201ENST00000553747 LCE2BO14633 110 aa9.2□□□□□ -0.94
LINC00648-201ENST00000553747 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
LINC00648-201ENST00000553747 LRCH3Q96II8 777 aa9.2□□□□□ -0.94
LINC00648-201ENST00000553747 TSR1Q2NL82 804 aaKnown RBP9.17□□□□□ -0.94
LINC00648-201ENST00000553747 TSKSQ9UJT2 592 aa9.17□□□□□ -0.94
LINC00648-201ENST00000553747 SMAPO00193 183 aa9.16□□□□□ -0.94
LINC00648-201ENST00000553747 GFRA3O60609 400 aa9.16□□□□□ -0.94
LINC00648-201ENST00000553747 CAMK2BQ13554 666 aa9.16□□□□□ -0.94
LINC00648-201ENST00000553747 NBR1Q14596 966 aa9.14□□□□□ -0.95
LINC00648-201ENST00000553747 MAP3K7O43318 606 aa9.13□□□□□ -0.95
LINC00648-201ENST00000553747 PPP4CP60510 307 aa9.13□□□□□ -0.95
LINC00648-201ENST00000553747 TRAF7Q6Q0C0 670 aa9.13□□□□□ -0.95
LINC00648-201ENST00000553747 SAMD7Q7Z3H4 446 aa9.12□□□□□ -0.95
LINC00648-201ENST00000553747 PRKD2Q9BZL6 878 aa9.12□□□□□ -0.95
LINC00648-201ENST00000553747 EN1Q05925 392 aaPredicted RBP9.11□□□□□ -0.95
LINC00648-201ENST00000553747 TJAP1Q5JTD0 557 aa9.11□□□□□ -0.95
LINC00648-201ENST00000553747 PACS2Q86VP3 889 aa9.11□□□□□ -0.95
LINC00648-201ENST00000553747 FAM198AQ9UFP1 575 aa9.11□□□□□ -0.95
LINC00648-201ENST00000553747 C3orf80F5H4A9 247 aa9.1□□□□□ -0.95
LINC00648-201ENST00000553747 LAPTM4AQ15012 233 aa9.1□□□□□ -0.95
LINC00648-201ENST00000553747 ZNF516Q92618 1163 aa9.08□□□□□ -0.96
LINC00648-201ENST00000553747 MTRQ99707 1265 aa9.08□□□□□ -0.96
LINC00648-201ENST00000553747 PRIM1P49642 420 aaKnown RBP9.07□□□□□ -0.96
LINC00648-201ENST00000553747 PPP1R18Q6NYC8 613 aa9.07□□□□□ -0.96
LINC00648-201ENST00000553747 CDCA7LQ96GN5 454 aa9.07□□□□□ -0.96
LINC00648-201ENST00000553747 RNF40O75150 1001 aa9.04□□□□□ -0.96
LINC00648-201ENST00000553747 PRSS12P56730 875 aa9.04□□□□□ -0.96
LINC00648-201ENST00000553747 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
LINC00648-201ENST00000553747 PNMA3Q9UL41 463 aa9.04□□□□□ -0.96
LINC00648-201ENST00000553747 NRG2O14511 850 aaPredicted RBP9.03□□□□□ -0.96
LINC00648-201ENST00000553747 PDIA6Q15084 440 aa9.03□□□□□ -0.96
LINC00648-201ENST00000553747 NKX2-3Q8TAU0 364 aa9.03□□□□□ -0.96
LINC00648-201ENST00000553747 TATDN2Q93075 761 aa9.03□□□□□ -0.96
LINC00648-201ENST00000553747 GRXCR2A6NFK2 248 aa9.02□□□□□ -0.97
LINC00648-201ENST00000553747 APLP1P51693 650 aa9.01□□□□□ -0.97
LINC00648-201ENST00000553747 CDHR5Q9HBB8 845 aa9.01□□□□□ -0.97
LINC00648-201ENST00000553747 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.01□□□□□ -0.97
LINC00648-201ENST00000553747 NBPF26B4DH59 902 aa8.99□□□□□ -0.97
LINC00648-201ENST00000553747 NUDT18Q6ZVK8 323 aa8.99□□□□□ -0.97
LINC00648-201ENST00000553747 V9GY48 417 aaPredicted RBP8.99□□□□□ -0.97
LINC00648-201ENST00000553747 ZNF787Q6DD87 383 aa8.98□□□□□ -0.97
LINC00648-201ENST00000553747 PDZRN3Q9UPQ7 1066 aa8.98□□□□□ -0.97
LINC00648-201ENST00000553747 SPDYE16A6NNV3 312 aaPredicted RBP8.97□□□□□ -0.97
LINC00648-201ENST00000553747 COPS2P61201 443 aa8.97□□□□□ -0.97
LINC00648-201ENST00000553747 BBXQ8WY36 941 aaPredicted RBP8.97□□□□□ -0.97
LINC00648-201ENST00000553747 CERKQ8TCT0 537 aa8.94□□□□□ -0.98
LINC00648-201ENST00000553747 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.94□□□□□ -0.98
LINC00648-201ENST00000553747 HDGFP51858 240 aaKnown RBP8.93□□□□□ -0.98
LINC00648-201ENST00000553747 SWT1Q5T5J6 900 aaKnown RBP8.93□□□□□ -0.98
LINC00648-201ENST00000553747 OSBPP22059 807 aa8.92□□□□□ -0.98
LINC00648-201ENST00000553747 E2F4Q16254 413 aa8.91□□□□□ -0.98
LINC00648-201ENST00000553747 ZNF775Q96BV0 537 aaPredicted RBP8.91□□□□□ -0.98
LINC00648-201ENST00000553747 PADI6Q6TGC4 694 aa8.9□□□□□ -0.98
LINC00648-201ENST00000553747 GGCXP38435 758 aa8.88□□□□□ -0.99
LINC00648-201ENST00000553747 SPRYD3Q8NCJ5 442 aa8.88□□□□□ -0.99
LINC00648-201ENST00000553747 ZPR1O75312 459 aa8.86□□□□□ -0.99
LINC00648-201ENST00000553747 TRIM67Q6ZTA4 783 aa8.86□□□□□ -0.99
LINC00648-201ENST00000553747 SLF2Q8IX21 1173 aa8.86□□□□□ -0.99
LINC00648-201ENST00000553747 EMID1Q96A84 441 aaPredicted RBP8.86□□□□□ -0.99
LINC00648-201ENST00000553747 NPDC1Q9NQX5 325 aaPredicted RBP8.86□□□□□ -0.99
LINC00648-201ENST00000553747 TTC13Q8NBP0 860 aa8.85□□□□□ -0.99
LINC00648-201ENST00000553747 RBM27Q9P2N5 1060 aaKnown RBP8.85□□□□□ -0.99
LINC00648-201ENST00000553747 BLOC1S3Q6QNY0 202 aa8.84□□□□□ -0.99
LINC00648-201ENST00000553747 RNF223E7ERA6 249 aa8.83□□□□□ -1
LINC00648-201ENST00000553747 PPEF1O14829 653 aaPredicted RBP8.83□□□□□ -1
LINC00648-201ENST00000553747 TLL1O43897 1013 aa8.83□□□□□ -1
LINC00648-201ENST00000553747 SLC19A1P41440 591 aa8.83□□□□□ -1
LINC00648-201ENST00000553747 PAXIP1Q6ZW49 1069 aaPredicted RBP8.83□□□□□ -1
LINC00648-201ENST00000553747 CFAP44Q96MT7 982 aa8.83□□□□□ -1
LINC00648-201ENST00000553747 TMUB1Q9BVT8 246 aa8.83□□□□□ -1
LINC00648-201ENST00000553747 WDR70Q9NW82 654 aa8.83□□□□□ -1
LINC00648-201ENST00000553747 PCDHB3Q9Y5E6 796 aa8.83□□□□□ -1
LINC00648-201ENST00000553747 POTECB2RU33 542 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms