RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 KCNH8Q96L42 1107 aa14.9□□□□□ -0.02
TTC8-208ENST00000553718 CCDC144AA2RUR9 1427 aa14.89□□□□□ -0.03
TTC8-208ENST00000553718 USP47Q96K76 1375 aa14.88□□□□□ -0.03
TTC8-208ENST00000553718 KDM5CP41229 1560 aa14.88□□□□□ -0.03
TTC8-208ENST00000553718 KIF7Q2M1P5 1343 aa14.88□□□□□ -0.03
TTC8-208ENST00000553718 C11orf95C9JLR9 678 aaPredicted RBP14.87□□□□□ -0.03
TTC8-208ENST00000553718 PRKRIP1Q9H875 184 aaPredicted RBP14.87□□□□□ -0.03
TTC8-208ENST00000553718 ABCA9Q8IUA7 1624 aa14.87□□□□□ -0.03
TTC8-208ENST00000553718 GPRASP1Q5JY77 1395 aa14.85□□□□□ -0.03
TTC8-208ENST00000553718 LAMC1P11047 1609 aa14.84□□□□□ -0.03
TTC8-208ENST00000553718 TRAPPC8Q9Y2L5 1435 aa14.84□□□□□ -0.03
TTC8-208ENST00000553718 PLA2R1Q13018 1463 aa14.84□□□□□ -0.03
TTC8-208ENST00000553718 CYB5RLQ6IPT4 315 aa14.84□□□□□ -0.03
TTC8-208ENST00000553718 SPAG9O60271 1321 aaKnown RBP14.84□□□□□ -0.03
TTC8-208ENST00000553718 KTN1Q86UP2 1357 aaKnown RBP14.84□□□□□ -0.03
TTC8-208ENST00000553718 CARD11Q9BXL7 1154 aa14.83□□□□□ -0.04
TTC8-208ENST00000553718 SUPT16HQ9Y5B9 1047 aaKnown RBP14.82□□□□□ -0.04
TTC8-208ENST00000553718 PRAG1Q86YV5 1406 aa14.82□□□□□ -0.04
TTC8-208ENST00000553718 NEURL4Q96JN8 1562 aa14.81□□□□□ -0.04
TTC8-208ENST00000553718 DCAF11Q8TEB1 546 aa14.81□□□□□ -0.04
TTC8-208ENST00000553718 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
TTC8-208ENST00000553718 FANCAO15360 1455 aa14.8□□□□□ -0.04
TTC8-208ENST00000553718 ZFYVE16Q7Z3T8 1539 aa14.8□□□□□ -0.04
TTC8-208ENST00000553718 PTPRTO14522 1441 aa14.79□□□□□ -0.04
TTC8-208ENST00000553718 DEPDC5O75140 1603 aa14.79□□□□□ -0.04
TTC8-208ENST00000553718 NPM1P06748 294 aaKnown RBP eCLIP14.78□□□□□ -0.04
TTC8-208ENST00000553718 TRPM1Q7Z4N2 1603 aa14.77□□□□□ -0.04
TTC8-208ENST00000553718 VWDEQ8N2E2 1590 aa14.77□□□□□ -0.04
TTC8-208ENST00000553718 INO80Q9ULG1 1556 aaPredicted RBP14.77□□□□□ -0.04
TTC8-208ENST00000553718 ASXL2Q76L83 1435 aa14.77□□□□□ -0.04
TTC8-208ENST00000553718 KANK1Q14678 1352 aa14.77□□□□□ -0.04
TTC8-208ENST00000553718 DHX29Q7Z478 1369 aaKnown RBP14.77□□□□□ -0.04
TTC8-208ENST00000553718 BCORL1Q5H9F3 1711 aa14.77□□□□□ -0.05
TTC8-208ENST00000553718 A2MP01023 1474 aa14.76□□□□□ -0.05
TTC8-208ENST00000553718 ATP7AQ04656 1500 aa14.76□□□□□ -0.05
TTC8-208ENST00000553718 WASHC2CQ9Y4E1 1318 aa14.75□□□□□ -0.05
TTC8-208ENST00000553718 ERICH6BQ5W0A0 696 aa14.75□□□□□ -0.05
TTC8-208ENST00000553718 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.75□□□□□ -0.05
TTC8-208ENST00000553718 PRDM15P57071 1507 aaPredicted RBP14.75□□□□□ -0.05
TTC8-208ENST00000553718 SCAPERQ9BY12 1400 aa14.75□□□□□ -0.05
TTC8-208ENST00000553718 CFAP74Q9C0B2 1584 aa14.74□□□□□ -0.05
TTC8-208ENST00000553718 ZNF326Q5BKZ1 582 aaKnown RBP14.74□□□□□ -0.05
TTC8-208ENST00000553718 TRPM2O94759 1503 aa14.74□□□□□ -0.05
TTC8-208ENST00000553718 ADGRL1O94910 1474 aa14.74□□□□□ -0.05
TTC8-208ENST00000553718 SLC24A1O60721 1099 aa14.73□□□□□ -0.05
TTC8-208ENST00000553718 NEFLP07196 543 aa14.73□□□□□ -0.05
TTC8-208ENST00000553718 AFAP1Q8N556 730 aa14.73□□□□□ -0.05
TTC8-208ENST00000553718 KDM2AQ9Y2K7 1162 aa14.73□□□□□ -0.05
TTC8-208ENST00000553718 TET3O43151 1660 aa14.73□□□□□ -0.05
TTC8-208ENST00000553718 ST20-MTHFSA0A0A6YYL1 179 aa14.72□□□□□ -0.05
TTC8-208ENST00000553718 RALBP1Q15311 655 aa14.72□□□□□ -0.05
TTC8-208ENST00000553718 HNRNPUQ00839 825 aaKnown RBP eCLIP14.71□□□□□ -0.05
TTC8-208ENST00000553718 MRS2Q9HD23 443 aa14.71□□□□□ -0.05
TTC8-208ENST00000553718 LMTK2Q8IWU2 1503 aa14.71□□□□□ -0.06
TTC8-208ENST00000553718 ZNF518AQ6AHZ1 1483 aa14.7□□□□□ -0.06
TTC8-208ENST00000553718 ZBED9Q6R2W3 1325 aa14.7□□□□□ -0.06
TTC8-208ENST00000553718 E9PCH4 1651 aa14.69□□□□□ -0.06
TTC8-208ENST00000553718 MLH3Q9UHC1 1453 aa14.69□□□□□ -0.06
TTC8-208ENST00000553718 CEP152O94986 1710 aa14.66□□□□□ -0.06
TTC8-208ENST00000553718 SPHKAPQ2M3C7 1700 aa14.66□□□□□ -0.06
TTC8-208ENST00000553718 NEO1Q92859 1461 aa14.66□□□□□ -0.06
TTC8-208ENST00000553718 BRD4O60885 1362 aaPredicted RBP14.66□□□□□ -0.06
TTC8-208ENST00000553718 INSRP06213 1382 aa14.66□□□□□ -0.06
TTC8-208ENST00000553718 RGL3Q3MIN7 710 aa14.66□□□□□ -0.06
TTC8-208ENST00000553718 RNF17Q9BXT8 1623 aaKnown RBP14.66□□□□□ -0.06
TTC8-208ENST00000553718 CD109Q6YHK3 1445 aa14.66□□□□□ -0.06
TTC8-208ENST00000553718 COL17A1Q9UMD9 1497 aaPredicted RBP14.65□□□□□ -0.06
TTC8-208ENST00000553718 KIAA1210Q9ULL0 1709 aa14.64□□□□□ -0.07
TTC8-208ENST00000553718 TMF1P82094 1093 aa14.64□□□□□ -0.07
TTC8-208ENST00000553718 CCDC184Q52MB2 194 aa14.64□□□□□ -0.07
TTC8-208ENST00000553718 CDCA8Q53HL2 280 aa14.64□□□□□ -0.07
TTC8-208ENST00000553718 TESK2Q96S53 571 aa14.64□□□□□ -0.07
TTC8-208ENST00000553718 MYBBP1AQ9BQG0 1328 aaKnown RBP14.64□□□□□ -0.07
TTC8-208ENST00000553718 KIDINS220Q9ULH0 1771 aa14.63□□□□□ -0.07
TTC8-208ENST00000553718 KIF3BO15066 747 aa14.63□□□□□ -0.07
TTC8-208ENST00000553718 FKBP8Q14318 412 aa14.63□□□□□ -0.07
TTC8-208ENST00000553718 NBPF1Q3BBV0 1214 aa14.63□□□□□ -0.07
TTC8-208ENST00000553718 MROH1Q8NDA8 1641 aa14.63□□□□□ -0.07
TTC8-208ENST00000553718 POGZQ7Z3K3 1410 aa14.62□□□□□ -0.07
TTC8-208ENST00000553718 MADDQ8WXG6 1647 aa14.62□□□□□ -0.07
TTC8-208ENST00000553718 MYOM2P54296 1465 aa14.62□□□□□ -0.07
TTC8-208ENST00000553718 ZMYM4Q5VZL5 1548 aa14.61□□□□□ -0.07
TTC8-208ENST00000553718 PNISRQ8TF01 805 aaKnown RBP14.61□□□□□ -0.07
TTC8-208ENST00000553718 PER1O15534 1290 aaPredicted RBP14.6□□□□□ -0.07
TTC8-208ENST00000553718 FAM9BQ8IZU0 186 aa14.6□□□□□ -0.07
TTC8-208ENST00000553718 SCAF11Q99590 1463 aaKnown RBP14.6□□□□□ -0.07
TTC8-208ENST00000553718 EFCAB6Q5THR3 1501 aa14.6□□□□□ -0.07
TTC8-208ENST00000553718 LRPPRCP42704 1394 aaKnown RBP14.6□□□□□ -0.07
TTC8-208ENST00000553718 PARD3Q8TEW0 1356 aa14.6□□□□□ -0.07
TTC8-208ENST00000553718 CLTCL1P53675 1640 aa14.59□□□□□ -0.07
TTC8-208ENST00000553718 TMC1Q8TDI8 760 aa14.58□□□□□ -0.08
TTC8-208ENST00000553718 EIF3AQ14152 1382 aaKnown RBP14.58□□□□□ -0.08
TTC8-208ENST00000553718 NLRP13Q86W25 1043 aa14.57□□□□□ -0.08
TTC8-208ENST00000553718 IQGAP1P46940 1657 aa14.57□□□□□ -0.08
TTC8-208ENST00000553718 RPGRIP1LQ68CZ1 1315 aa14.57□□□□□ -0.08
TTC8-208ENST00000553718 GLI2P10070 1586 aa14.56□□□□□ -0.08
TTC8-208ENST00000553718 HECW2Q9P2P5 1572 aa14.56□□□□□ -0.08
TTC8-208ENST00000553718 POLR3GLQ9BT43 218 aa14.56□□□□□ -0.08
TTC8-208ENST00000553718 MYT1LQ9UL68 1186 aa14.56□□□□□ -0.08
TTC8-208ENST00000553718 SMG6Q86US8 1419 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms