RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 SPATA31D1Q6ZQQ2 1576 aa11.07□□□□□ -0.64
VIPAS39-205ENST00000553691 ADCY10Q96PN6 1610 aa11.05□□□□□ -0.64
VIPAS39-205ENST00000553691 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-205ENST00000553691 MICALL2Q8IY33 904 aa11.02□□□□□ -0.65
VIPAS39-205ENST00000553691 IQGAP2Q13576 1575 aa11.02□□□□□ -0.65
VIPAS39-205ENST00000553691 RAPGEF2Q9Y4G8 1499 aa11.01□□□□□ -0.65
VIPAS39-205ENST00000553691 PPP1R37O75864 691 aa11.01□□□□□ -0.65
VIPAS39-205ENST00000553691 PRXQ9BXM0 1461 aa11□□□□□ -0.65
VIPAS39-205ENST00000553691 DISP1Q96F81 1524 aa10.99□□□□□ -0.65
VIPAS39-205ENST00000553691 TMEM121BQ9BXQ6 578 aaPredicted RBP10.98□□□□□ -0.65
VIPAS39-205ENST00000553691 UGGT2Q9NYU1 1516 aa10.98□□□□□ -0.65
VIPAS39-205ENST00000553691 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
VIPAS39-205ENST00000553691 CTTNBP2Q8WZ74 1663 aa10.96□□□□□ -0.65
VIPAS39-205ENST00000553691 TMEM92Q6UXU6 159 aa10.95□□□□□ -0.66
VIPAS39-205ENST00000553691 KIAA0556O60303 1618 aa10.94□□□□□ -0.66
VIPAS39-205ENST00000553691 TTBK1Q5TCY1 1321 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-205ENST00000553691 KIF21BO75037 1637 aa10.92□□□□□ -0.66
VIPAS39-205ENST00000553691 TNIKQ9UKE5 1360 aa10.91□□□□□ -0.66
VIPAS39-205ENST00000553691 PTPRGP23470 1445 aa10.91□□□□□ -0.66
VIPAS39-205ENST00000553691 UHRF1BP1LA0JNW5 1464 aa10.9□□□□□ -0.66
VIPAS39-205ENST00000553691 CARMIL2Q6F5E8 1435 aa10.9□□□□□ -0.66
VIPAS39-205ENST00000553691 LCE2DQ5TA82 110 aaPredicted RBP10.89□□□□□ -0.67
VIPAS39-205ENST00000553691 PLB1Q6P1J6 1458 aa10.88□□□□□ -0.67
VIPAS39-205ENST00000553691 COL17A1Q9UMD9 1497 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-205ENST00000553691 GTPBP6O43824 516 aaPredicted RBP10.88□□□□□ -0.67
VIPAS39-205ENST00000553691 ABCC2Q92887 1545 aa10.88□□□□□ -0.67
VIPAS39-205ENST00000553691 MAP3K4Q9Y6R4 1608 aa10.87□□□□□ -0.67
VIPAS39-205ENST00000553691 PCF11O94913 1555 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-205ENST00000553691 GLI2P10070 1586 aa10.87□□□□□ -0.67
VIPAS39-205ENST00000553691 EEA1Q15075 1411 aa10.87□□□□□ -0.67
VIPAS39-205ENST00000553691 TEX14Q8IWB6 1497 aa10.86□□□□□ -0.67
VIPAS39-205ENST00000553691 ASXL2Q76L83 1435 aa10.85□□□□□ -0.67
VIPAS39-205ENST00000553691 UACAQ9BZF9 1416 aa10.85□□□□□ -0.67
VIPAS39-205ENST00000553691 KDM5BQ9UGL1 1544 aa10.85□□□□□ -0.67
VIPAS39-205ENST00000553691 ABCA8O94911 1581 aa10.85□□□□□ -0.67
VIPAS39-205ENST00000553691 SAMD9Q5K651 1589 aa10.85□□□□□ -0.67
VIPAS39-205ENST00000553691 ST18O60284 1047 aa10.84□□□□□ -0.67
VIPAS39-205ENST00000553691 ZCCHC11Q5TAX3 1644 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-205ENST00000553691 C2orf72A6NCS6 295 aa10.82□□□□□ -0.68
VIPAS39-205ENST00000553691 SNPHO15079 494 aa10.82□□□□□ -0.68
VIPAS39-205ENST00000553691 BBXQ8WY36 941 aaPredicted RBP10.82□□□□□ -0.68
VIPAS39-205ENST00000553691 GOLGA3Q08378 1498 aa10.81□□□□□ -0.68
VIPAS39-205ENST00000553691 CERKQ8TCT0 537 aa10.81□□□□□ -0.68
VIPAS39-205ENST00000553691 RYDENQ9NUL5 291 aaKnown RBP10.81□□□□□ -0.68
VIPAS39-205ENST00000553691 ADAMTSL3P82987 1691 aa10.81□□□□□ -0.68
VIPAS39-205ENST00000553691 HOXB3P14651 431 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-205ENST00000553691 POTEMA6NI47 508 aa10.79□□□□□ -0.68
VIPAS39-205ENST00000553691 POTEGQ6S5H5 508 aa10.79□□□□□ -0.68
VIPAS39-205ENST00000553691 PTPRMP28827 1452 aa10.79□□□□□ -0.68
VIPAS39-205ENST00000553691 TMC2Q8TDI7 906 aa10.78□□□□□ -0.68
VIPAS39-205ENST00000553691 MARVELD3Q96A59 401 aa10.77□□□□□ -0.69
VIPAS39-205ENST00000553691 EPRSP07814 1512 aaKnown RBP10.77□□□□□ -0.69
VIPAS39-205ENST00000553691 KIF3CO14782 793 aa10.76□□□□□ -0.69
VIPAS39-205ENST00000553691 FAM9AQ8IZU1 332 aaPredicted RBP10.75□□□□□ -0.69
VIPAS39-205ENST00000553691 CFAP44Q96MT7 982 aa10.75□□□□□ -0.69
VIPAS39-205ENST00000553691 MADDQ8WXG6 1647 aa10.75□□□□□ -0.69
VIPAS39-205ENST00000553691 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-205ENST00000553691 ZNF710Q8N1W2 664 aa10.74□□□□□ -0.69
VIPAS39-205ENST00000553691 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.74□□□□□ -0.69
VIPAS39-205ENST00000553691 WDR7Q9Y4E6 1490 aa10.74□□□□□ -0.69
VIPAS39-205ENST00000553691 RIMS1Q86UR5 1692 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-205ENST00000553691 DOK7Q18PE1 504 aa10.73□□□□□ -0.69
VIPAS39-205ENST00000553691 RAPGEF6Q8TEU7 1601 aa10.73□□□□□ -0.69
VIPAS39-205ENST00000553691 BCORL1Q5H9F3 1711 aa10.72□□□□□ -0.69
VIPAS39-205ENST00000553691 FHOD3Q2V2M9 1422 aa10.72□□□□□ -0.69
VIPAS39-205ENST00000553691 ATP10BO94823 1461 aa10.72□□□□□ -0.69
VIPAS39-205ENST00000553691 EFCAB5A4FU69 1503 aa10.71□□□□□ -0.69
VIPAS39-205ENST00000553691 NUP153P49790 1475 aaKnown RBP10.71□□□□□ -0.69
VIPAS39-205ENST00000553691 P3H3Q8IVL6 736 aa10.71□□□□□ -0.69
VIPAS39-205ENST00000553691 SPRYD3Q8NCJ5 442 aa10.71□□□□□ -0.69
VIPAS39-205ENST00000553691 ARID4BQ4LE39 1312 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-205ENST00000553691 CADPS2Q86UW7 1296 aa10.7□□□□□ -0.7
VIPAS39-205ENST00000553691 KCNH8Q96L42 1107 aa10.7□□□□□ -0.7
VIPAS39-205ENST00000553691 CD109Q6YHK3 1445 aa10.69□□□□□ -0.7
VIPAS39-205ENST00000553691 CFAP43Q8NDM7 1665 aa10.69□□□□□ -0.7
VIPAS39-205ENST00000553691 NCKAP5LQ9HCH0 1330 aa10.68□□□□□ -0.7
VIPAS39-205ENST00000553691 EMP3P54852 163 aa10.68□□□□□ -0.7
VIPAS39-205ENST00000553691 DSG2Q14126 1118 aa10.68□□□□□ -0.7
VIPAS39-205ENST00000553691 KHSRPQ92945 711 aaKnown RBP eCLIP10.68□□□□□ -0.7
VIPAS39-205ENST00000553691 GPHNQ9NQX3 736 aaPredicted RBP10.68□□□□□ -0.7
VIPAS39-205ENST00000553691 ARHGAP35Q9NRY4 1499 aa10.68□□□□□ -0.7
VIPAS39-205ENST00000553691 PLPP6Q8IY26 295 aa10.67□□□□□ -0.7
VIPAS39-205ENST00000553691 RIMBP2O15034 1052 aa10.66□□□□□ -0.7
VIPAS39-205ENST00000553691 HSPA2P54652 639 aa10.66□□□□□ -0.7
VIPAS39-205ENST00000553691 ARSIQ5FYB1 569 aa10.66□□□□□ -0.7
VIPAS39-205ENST00000553691 MAGI3Q5TCQ9 1506 aa10.66□□□□□ -0.7
VIPAS39-205ENST00000553691 CRISPLD2Q9H0B8 497 aa10.65□□□□□ -0.7
VIPAS39-205ENST00000553691 ABCA9Q8IUA7 1624 aa10.65□□□□□ -0.7
VIPAS39-205ENST00000553691 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-205ENST00000553691 FOXK1P85037 733 aa10.64□□□□□ -0.71
VIPAS39-205ENST00000553691 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-205ENST00000553691 FAM205CA6NFA0 338 aa10.63□□□□□ -0.71
VIPAS39-205ENST00000553691 GPR153Q6NV75 609 aa10.63□□□□□ -0.71
VIPAS39-205ENST00000553691 LRRIQ1Q96JM4 1722 aa10.62□□□□□ -0.71
VIPAS39-205ENST00000553691 ARID3CA6NKF2 412 aa10.62□□□□□ -0.71
VIPAS39-205ENST00000553691 PDE4AP27815 886 aa10.62□□□□□ -0.71
VIPAS39-205ENST00000553691 RANGAP1P46060 587 aaPredicted RBP10.62□□□□□ -0.71
VIPAS39-205ENST00000553691 PCDH10Q9P2E7 1040 aa10.62□□□□□ -0.71
VIPAS39-205ENST00000553691 STRCQ7RTU9 1775 aa10.62□□□□□ -0.71
VIPAS39-205ENST00000553691 POTEB3A0JP26 581 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms