RNA–Protein interactions for RNA: ENST00000553660.5

CNIH1-203, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 2 BASIC

Gene CNIH1, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-203ENST00000553660 PREX2Q70Z35 1606 aa16.9■□□□□ 0.3
CNIH1-203ENST00000553660 PYGBP11216 843 aa16.89■□□□□ 0.29
CNIH1-203ENST00000553660 MAP3K1Q13233 1512 aa16.89■□□□□ 0.29
CNIH1-203ENST00000553660 EHBP1L1Q8N3D4 1523 aa16.89■□□□□ 0.29
CNIH1-203ENST00000553660 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
CNIH1-203ENST00000553660 ZNF518AQ6AHZ1 1483 aa16.88■□□□□ 0.29
CNIH1-203ENST00000553660 CHRM1P11229 460 aaPredicted RBP16.88■□□□□ 0.29
CNIH1-203ENST00000553660 CDC42BPBQ9Y5S2 1711 aa16.87■□□□□ 0.29
CNIH1-203ENST00000553660 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
CNIH1-203ENST00000553660 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
CNIH1-203ENST00000553660 KIF12Q96FN5 646 aa16.86■□□□□ 0.29
CNIH1-203ENST00000553660 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
CNIH1-203ENST00000553660 KIAA1107Q9UPP5 1409 aa16.84■□□□□ 0.29
CNIH1-203ENST00000553660 ABCC1P33527 1531 aa16.84■□□□□ 0.29
CNIH1-203ENST00000553660 KDM5CP41229 1560 aa16.84■□□□□ 0.29
CNIH1-203ENST00000553660 TIAM1Q13009 1591 aa16.84■□□□□ 0.29
CNIH1-203ENST00000553660 CDC42BPAQ5VT25 1732 aa16.84■□□□□ 0.29
CNIH1-203ENST00000553660 ZFYVE16Q7Z3T8 1539 aa16.83■□□□□ 0.28
CNIH1-203ENST00000553660 PLEKHH2Q8IVE3 1493 aa16.83■□□□□ 0.28
CNIH1-203ENST00000553660 MLH3Q9UHC1 1453 aa16.82■□□□□ 0.28
CNIH1-203ENST00000553660 CLCN6P51797 869 aa16.81■□□□□ 0.28
CNIH1-203ENST00000553660 CFDP1Q9UEE9 299 aaPredicted RBP16.81■□□□□ 0.28
CNIH1-203ENST00000553660 MAP3K13O43283 966 aa16.8■□□□□ 0.28
CNIH1-203ENST00000553660 SP7Q8TDD2 431 aaPredicted RBP16.8■□□□□ 0.28
CNIH1-203ENST00000553660 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
CNIH1-203ENST00000553660 LRRC9Q6ZRR7 1453 aa16.8■□□□□ 0.28
CNIH1-203ENST00000553660 YEATS2Q9ULM3 1422 aa16.79■□□□□ 0.28
CNIH1-203ENST00000553660 AFAP1Q8N556 730 aa16.79■□□□□ 0.28
CNIH1-203ENST00000553660 ATP10AO60312 1499 aa16.79■□□□□ 0.28
CNIH1-203ENST00000553660 SGIP1Q9BQI5 828 aa16.78■□□□□ 0.28
CNIH1-203ENST00000553660 NCOA2Q15596 1464 aa16.78■□□□□ 0.28
CNIH1-203ENST00000553660 TRAPPC8Q9Y2L5 1435 aa16.78■□□□□ 0.28
CNIH1-203ENST00000553660 SAMD9LQ8IVG5 1584 aa16.77■□□□□ 0.27
CNIH1-203ENST00000553660 SUPT6HQ7KZ85 1726 aaKnown RBP16.76■□□□□ 0.27
CNIH1-203ENST00000553660 PCDHB13Q9Y5F0 798 aa16.76■□□□□ 0.27
CNIH1-203ENST00000553660 C9orf84Q5VXU9 1444 aa16.76■□□□□ 0.27
CNIH1-203ENST00000553660 HECW2Q9P2P5 1572 aa16.76■□□□□ 0.27
CNIH1-203ENST00000553660 REREQ9P2R6 1566 aa16.76■□□□□ 0.27
CNIH1-203ENST00000553660 ITSN2Q9NZM3 1697 aa16.75■□□□□ 0.27
CNIH1-203ENST00000553660 ADAMTSL3P82987 1691 aa16.75■□□□□ 0.27
CNIH1-203ENST00000553660 GABBR2O75899 941 aa16.73■□□□□ 0.27
CNIH1-203ENST00000553660 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
CNIH1-203ENST00000553660 MS4A3Q96HJ5 214 aa16.73■□□□□ 0.27
CNIH1-203ENST00000553660 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
CNIH1-203ENST00000553660 BCORL1Q5H9F3 1711 aa16.73■□□□□ 0.27
CNIH1-203ENST00000553660 ARID4BQ4LE39 1312 aaPredicted RBP16.72■□□□□ 0.27
CNIH1-203ENST00000553660 SYCP2Q9BX26 1530 aa16.71■□□□□ 0.27
CNIH1-203ENST00000553660 MBD5Q9P267 1494 aa16.71■□□□□ 0.27
CNIH1-203ENST00000553660 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.262e-8■■■■■ 32.7
CNIH1-203ENST00000553660 KANK4Q5T7N3 995 aaPredicted RBP16.7■□□□□ 0.26
CNIH1-203ENST00000553660 ZNF467Q7Z7K2 595 aaPredicted RBP16.7■□□□□ 0.26
CNIH1-203ENST00000553660 AGLP35573 1532 aa16.7■□□□□ 0.26
CNIH1-203ENST00000553660 DIP2CQ9Y2E4 1556 aa16.69■□□□□ 0.26
CNIH1-203ENST00000553660 RGL2O15211 777 aa16.69■□□□□ 0.26
CNIH1-203ENST00000553660 GALR2O43603 387 aaPredicted RBP16.69■□□□□ 0.26
CNIH1-203ENST00000553660 MIA2Q96PC5 1412 aa16.69■□□□□ 0.26
CNIH1-203ENST00000553660 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
CNIH1-203ENST00000553660 IFNL1Q8IU54 200 aa16.68■□□□□ 0.26
CNIH1-203ENST00000553660 RNF25Q96BH1 459 aaPredicted RBP16.68■□□□□ 0.26
CNIH1-203ENST00000553660 RTEL1-TNFRSF6BF6WH68 1400 aa16.68■□□□□ 0.26
CNIH1-203ENST00000553660 PTPRMP28827 1452 aa16.67■□□□□ 0.26
CNIH1-203ENST00000553660 KIDINS220Q9ULH0 1771 aa16.67■□□□□ 0.26
CNIH1-203ENST00000553660 PCDHB8Q9UN66 801 aa16.66■□□□□ 0.26
CNIH1-203ENST00000553660 ABCA6Q8N139 1617 aa16.66■□□□□ 0.26
CNIH1-203ENST00000553660 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
CNIH1-203ENST00000553660 SIGLEC1Q9BZZ2 1709 aa16.65■□□□□ 0.26
CNIH1-203ENST00000553660 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
CNIH1-203ENST00000553660 INO80Q9ULG1 1556 aaPredicted RBP16.64■□□□□ 0.25
CNIH1-203ENST00000553660 MYOM3Q5VTT5 1437 aa16.64■□□□□ 0.25
CNIH1-203ENST00000553660 RIOK3O14730 519 aaKnown RBP16.64■□□□□ 0.25
CNIH1-203ENST00000553660 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.25
CNIH1-203ENST00000553660 ATP7AQ04656 1500 aa16.64■□□□□ 0.25
CNIH1-203ENST00000553660 MADDQ8WXG6 1647 aa16.63■□□□□ 0.25
CNIH1-203ENST00000553660 CCDC141Q6ZP82 1450 aa16.63■□□□□ 0.25
CNIH1-203ENST00000553660 ARHGEF5Q12774 1597 aa16.63■□□□□ 0.25
CNIH1-203ENST00000553660 PLXNC1O60486 1568 aa16.6■□□□□ 0.25
CNIH1-203ENST00000553660 A2MP01023 1474 aa16.59■□□□□ 0.25
CNIH1-203ENST00000553660 TSPY4P0CV99 314 aa16.57■□□□□ 0.24
CNIH1-203ENST00000553660 TSPY10P0CW01 314 aa16.57■□□□□ 0.24
CNIH1-203ENST00000553660 CNTLNQ9NXG0 1405 aa16.56■□□□□ 0.24
CNIH1-203ENST00000553660 DHX29Q7Z478 1369 aaKnown RBP16.56■□□□□ 0.24
CNIH1-203ENST00000553660 VGFO15240 615 aaPredicted RBP16.56■□□□□ 0.24
CNIH1-203ENST00000553660 MLECQ14165 292 aa16.56■□□□□ 0.24
CNIH1-203ENST00000553660 TAOK2Q9UL54 1235 aa16.56■□□□□ 0.24
CNIH1-203ENST00000553660 TRPC6Q9Y210 931 aa16.56■□□□□ 0.24
CNIH1-203ENST00000553660 RIMS1Q86UR5 1692 aaKnown RBP16.55■□□□□ 0.24
CNIH1-203ENST00000553660 ADGBQ8N7X0 1667 aa16.55■□□□□ 0.24
CNIH1-203ENST00000553660 FER1L4A9Z1Z3 1794 aa16.54■□□□□ 0.24
CNIH1-203ENST00000553660 PDAP1Q13442 181 aaKnown RBP16.54■□□□□ 0.24
CNIH1-203ENST00000553660 MAST1Q9Y2H9 1570 aa16.54■□□□□ 0.24
CNIH1-203ENST00000553660 TCOF1Q13428 1488 aaKnown RBP16.54■□□□□ 0.24
CNIH1-203ENST00000553660 FGD6Q6ZV73 1430 aa16.53■□□□□ 0.24
CNIH1-203ENST00000553660 TIE1P35590 1138 aa16.52■□□□□ 0.24
CNIH1-203ENST00000553660 PSEN1P49768 467 aa16.51■□□□□ 0.23
CNIH1-203ENST00000553660 SHANK2Q9UPX8 1470 aa16.5■□□□□ 0.23
CNIH1-203ENST00000553660 ESF1Q9H501 851 aaKnown RBP16.5■□□□□ 0.23
CNIH1-203ENST00000553660 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
CNIH1-203ENST00000553660 PTPN23Q9H3S7 1636 aa16.49■□□□□ 0.23
CNIH1-203ENST00000553660 LMTK3Q96Q04 1460 aa16.48■□□□□ 0.23
CNIH1-203ENST00000553660 ABCC5O15440 1437 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms