RNA–Protein interactions for RNA: ENST00000553618.1

AL135978.1-201, humanhuman

BASIC

Gene AL135978.1, Length 1,266 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL135978.1-201ENST00000553618 TCOF1Q13428 1488 aaKnown RBP11□□□□□ -0.65
AL135978.1-201ENST00000553618 MYO3AQ8NEV4 1616 aa11□□□□□ -0.65
AL135978.1-201ENST00000553618 PKD2Q13563 968 aa11□□□□□ -0.65
AL135978.1-201ENST00000553618 PPP6R1Q9UPN7 881 aa11□□□□□ -0.65
AL135978.1-201ENST00000553618 PTPRKQ15262 1439 aa11□□□□□ -0.65
AL135978.1-201ENST00000553618 CNTLNQ9NXG0 1405 aa11□□□□□ -0.65
AL135978.1-201ENST00000553618 CAMSAP2Q08AD1 1489 aa11□□□□□ -0.65
AL135978.1-201ENST00000553618 ALKQ9UM73 1620 aa10.99□□□□□ -0.65
AL135978.1-201ENST00000553618 KIF3BO15066 747 aa10.99□□□□□ -0.65
AL135978.1-201ENST00000553618 MYOM3Q5VTT5 1437 aa10.99□□□□□ -0.65
AL135978.1-201ENST00000553618 MIA2Q96PC5 1412 aa10.99□□□□□ -0.65
AL135978.1-201ENST00000553618 INO80Q9ULG1 1556 aaPredicted RBP10.99□□□□□ -0.65
AL135978.1-201ENST00000553618 CEP170BQ9Y4F5 1589 aaPredicted RBP10.99□□□□□ -0.65
AL135978.1-201ENST00000553618 RGS17Q9UGC6 210 aaPredicted RBP10.98□□□□□ -0.65
AL135978.1-201ENST00000553618 CCDC141Q6ZP82 1450 aa10.98□□□□□ -0.65
AL135978.1-201ENST00000553618 MROH2AA6NES4 1674 aa10.98□□□□□ -0.65
AL135978.1-201ENST00000553618 ZNF142P52746 1687 aaPredicted RBP10.97□□□□□ -0.65
AL135978.1-201ENST00000553618 PLXNC1O60486 1568 aa10.96□□□□□ -0.65
AL135978.1-201ENST00000553618 PLA2R1Q13018 1463 aa10.96□□□□□ -0.65
AL135978.1-201ENST00000553618 FBXO31Q5XUX0 539 aaPredicted RBP10.96□□□□□ -0.65
AL135978.1-201ENST00000553618 TOM1O60784 492 aa10.95□□□□□ -0.66
AL135978.1-201ENST00000553618 NEURL4Q96JN8 1562 aa10.94□□□□□ -0.66
AL135978.1-201ENST00000553618 SHANK2Q9UPX8 1470 aa10.94□□□□□ -0.66
AL135978.1-201ENST00000553618 DNMT1P26358 1616 aaKnown RBP10.94□□□□□ -0.66
AL135978.1-201ENST00000553618 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
AL135978.1-201ENST00000553618 WASHC2CQ9Y4E1 1318 aa10.93□□□□□ -0.66
AL135978.1-201ENST00000553618 ABCC5O15440 1437 aa10.92□□□□□ -0.66
AL135978.1-201ENST00000553618 RRP7BPQ9NSQ0 103 aa10.92□□□□□ -0.66
AL135978.1-201ENST00000553618 A2ML1A8K2U0 1454 aa10.92□□□□□ -0.66
AL135978.1-201ENST00000553618 VWDEQ8N2E2 1590 aa10.91□□□□□ -0.66
AL135978.1-201ENST00000553618 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
AL135978.1-201ENST00000553618 FGD6Q6ZV73 1430 aa10.91□□□□□ -0.66
AL135978.1-201ENST00000553618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.9□□□□□ -0.66
AL135978.1-201ENST00000553618 STRCP1A6NGW2 1772 aa10.9□□□□□ -0.66
AL135978.1-201ENST00000553618 ADGBQ8N7X0 1667 aa10.9□□□□□ -0.66
AL135978.1-201ENST00000553618 PPARGC1BQ86YN6 1023 aaKnown RBP10.9□□□□□ -0.66
AL135978.1-201ENST00000553618 POTEAQ6S8J7 498 aa10.89□□□□□ -0.67
AL135978.1-201ENST00000553618 POLR1AO95602 1720 aaPredicted RBP10.89□□□□□ -0.67
AL135978.1-201ENST00000553618 CPS1P31327 1500 aa10.89□□□□□ -0.67
AL135978.1-201ENST00000553618 FAM50AQ14320 339 aaKnown RBP10.88□□□□□ -0.67
AL135978.1-201ENST00000553618 MAST1Q9Y2H9 1570 aa10.88□□□□□ -0.67
AL135978.1-201ENST00000553618 DAPK1P53355 1430 aa10.87□□□□□ -0.67
AL135978.1-201ENST00000553618 TNRQ92752 1358 aa10.87□□□□□ -0.67
AL135978.1-201ENST00000553618 PTPN23Q9H3S7 1636 aa10.87□□□□□ -0.67
AL135978.1-201ENST00000553618 ANKLE2Q86XL3 938 aa10.86□□□□□ -0.67
AL135978.1-201ENST00000553618 KIF15Q9NS87 1388 aa10.86□□□□□ -0.67
AL135978.1-201ENST00000553618 LRRC7Q96NW7 1537 aa10.85□□□□□ -0.67
AL135978.1-201ENST00000553618 NPHP4O75161 1426 aaPredicted RBP10.84□□□□□ -0.67
AL135978.1-201ENST00000553618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.67
AL135978.1-201ENST00000553618 ANKRD30AQ9BXX3 1397 aa10.83□□□□□ -0.68
AL135978.1-201ENST00000553618 SETD1AO15047 1707 aaKnown RBP10.83□□□□□ -0.68
AL135978.1-201ENST00000553618 DUOX2Q9NRD8 1548 aa10.83□□□□□ -0.68
AL135978.1-201ENST00000553618 PZPP20742 1482 aa10.82□□□□□ -0.68
AL135978.1-201ENST00000553618 KDM5DQ9BY66 1539 aa10.82□□□□□ -0.68
AL135978.1-201ENST00000553618 THEMISQ8N1K5 641 aaPredicted RBP10.8□□□□□ -0.68
AL135978.1-201ENST00000553618 ERBINQ96RT1 1412 aa10.8□□□□□ -0.68
AL135978.1-201ENST00000553618 MED14O60244 1454 aa10.8□□□□□ -0.68
AL135978.1-201ENST00000553618 IQGAP1P46940 1657 aa10.79□□□□□ -0.68
AL135978.1-201ENST00000553618 ABCC3O15438 1527 aa10.79□□□□□ -0.68
AL135978.1-201ENST00000553618 FAM135AQ9P2D6 1515 aa10.79□□□□□ -0.68
AL135978.1-201ENST00000553618 RBM33Q96EV2 1170 aaKnown RBP10.79□□□□□ -0.68
AL135978.1-201ENST00000553618 MROH1Q8NDA8 1641 aa10.79□□□□□ -0.68
AL135978.1-201ENST00000553618 XIRP1Q702N8 1843 aaKnown RBP10.79□□□□□ -0.68
AL135978.1-201ENST00000553618 UGGT1Q9NYU2 1555 aa10.78□□□□□ -0.68
AL135978.1-201ENST00000553618 RNF17Q9BXT8 1623 aaKnown RBP10.78□□□□□ -0.68
AL135978.1-201ENST00000553618 ITGAEP38570 1179 aa10.78□□□□□ -0.68
AL135978.1-201ENST00000553618 PCGF6Q9BYE7 350 aa10.78□□□□□ -0.68
AL135978.1-201ENST00000553618 ADGRL2O95490 1459 aa10.78□□□□□ -0.68
AL135978.1-201ENST00000553618 EIF2AK4Q9P2K8 1649 aaKnown RBP10.77□□□□□ -0.68
AL135978.1-201ENST00000553618 ARHGAP31Q2M1Z3 1444 aa10.77□□□□□ -0.68
AL135978.1-201ENST00000553618 LTKP29376 864 aa10.77□□□□□ -0.69
AL135978.1-201ENST00000553618 CFAP65Q6ZU64 1925 aaKnown RBP10.77□□□□□ -0.69
AL135978.1-201ENST00000553618 DEPDC5O75140 1603 aa10.76□□□□□ -0.69
AL135978.1-201ENST00000553618 ANKRD50Q9ULJ7 1429 aa10.76□□□□□ -0.69
AL135978.1-201ENST00000553618 IDI1Q13907 227 aa10.76□□□□□ -0.69
AL135978.1-201ENST00000553618 CROCC2H7BZ55 1655 aa10.76□□□□□ -0.69
AL135978.1-201ENST00000553618 NLRP1Q9C000 1473 aa10.75□□□□□ -0.69
AL135978.1-201ENST00000553618 KANK1Q14678 1352 aa10.75□□□□□ -0.69
AL135978.1-201ENST00000553618 ERVK-7P63135 1459 aa10.74□□□□□ -0.69
AL135978.1-201ENST00000553618 ZC3H13Q5T200 1668 aaKnown RBP10.74□□□□□ -0.69
AL135978.1-201ENST00000553618 ROCK1Q13464 1354 aa10.74□□□□□ -0.69
AL135978.1-201ENST00000553618 PRDM15P57071 1507 aaPredicted RBP10.74□□□□□ -0.69
AL135978.1-201ENST00000553618 TRIM26Q12899 539 aaPredicted RBP10.73□□□□□ -0.69
AL135978.1-201ENST00000553618 SYNMO15061 1565 aa10.72□□□□□ -0.69
AL135978.1-201ENST00000553618 SRCAPQ6ZRS2 3230 aa10.72□□□□□ -0.69
AL135978.1-201ENST00000553618 TXNDC2Q86VQ3 553 aa10.71□□□□□ -0.69
AL135978.1-201ENST00000553618 LMTK2Q8IWU2 1503 aa10.71□□□□□ -0.69
AL135978.1-201ENST00000553618 CEP152O94986 1710 aa10.7□□□□□ -0.7
AL135978.1-201ENST00000553618 UPF1Q92900 1129 aaKnown RBP eCLIP10.7□□□□□ -0.7
AL135978.1-201ENST00000553618 SLC52A1Q9NWF4 448 aa10.7□□□□□ -0.7
AL135978.1-201ENST00000553618 NOS1P29475 1434 aa10.69□□□□□ -0.7
AL135978.1-201ENST00000553618 FAM135BQ49AJ0 1406 aa10.69□□□□□ -0.7
AL135978.1-201ENST00000553618 RRBP1Q9P2E9 1410 aaKnown RBP10.69□□□□□ -0.7
AL135978.1-201ENST00000553618 TRIM52Q96A61 297 aa10.69□□□□□ -0.7
AL135978.1-201ENST00000553618 UBR1Q8IWV7 1749 aa10.69□□□□□ -0.7
AL135978.1-201ENST00000553618 ROBO1Q9Y6N7 1651 aa10.69□□□□□ -0.7
AL135978.1-201ENST00000553618 SCAF11Q99590 1463 aaKnown RBP10.68□□□□□ -0.7
AL135978.1-201ENST00000553618 TMEM94Q12767 1356 aa10.68□□□□□ -0.7
AL135978.1-201ENST00000553618 STAG3Q9UJ98 1225 aa10.68□□□□□ -0.7
AL135978.1-201ENST00000553618 NUP155O75694 1391 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms