RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 ZMYND15Q9H091 742 aa7.49□□□□□ -1.21
TDP1-207ENST00000553617 ZNF316A6NFI3 1004 aaPredicted RBP7.48□□□□□ -1.21
TDP1-207ENST00000553617 EMP3P54852 163 aa7.47□□□□□ -1.21
TDP1-207ENST00000553617 PTGDRQ13258 359 aa7.47□□□□□ -1.21
TDP1-207ENST00000553617 DDX12PQ92771 950 aa7.47□□□□□ -1.21
TDP1-207ENST00000553617 EVI5O60447 810 aa7.46□□□□□ -1.22
TDP1-207ENST00000553617 POTEB3A0JP26 581 aa7.45□□□□□ -1.22
TDP1-207ENST00000553617 TBC1D12O60347 775 aa7.45□□□□□ -1.22
TDP1-207ENST00000553617 POTEBQ6S5H4 581 aa7.45□□□□□ -1.22
TDP1-207ENST00000553617 PTCD2Q8WV60 388 aaKnown RBP7.45□□□□□ -1.22
TDP1-207ENST00000553617 GOPCQ9HD26 462 aa7.45□□□□□ -1.22
TDP1-207ENST00000553617 RSPH6AQ9H0K4 717 aa7.44□□□□□ -1.22
TDP1-207ENST00000553617 ANO8Q9HCE9 1232 aaPredicted RBP7.44□□□□□ -1.22
TDP1-207ENST00000553617 HOXB3P14651 431 aaPredicted RBP7.43□□□□□ -1.22
TDP1-207ENST00000553617 HS3ST6Q96QI5 342 aa7.43□□□□□ -1.22
TDP1-207ENST00000553617 FAM205CA6NFA0 338 aa7.42□□□□□ -1.22
TDP1-207ENST00000553617 SLC34A2O95436 690 aa7.42□□□□□ -1.22
TDP1-207ENST00000553617 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
TDP1-207ENST00000553617 KRTAP3-2Q9BYR7 98 aa7.42□□□□□ -1.22
TDP1-207ENST00000553617 ONECUT3O60422 494 aaPredicted RBP7.41□□□□□ -1.22
TDP1-207ENST00000553617 MS4A1P11836 297 aa7.41□□□□□ -1.22
TDP1-207ENST00000553617 GIGYF2Q6Y7W6 1299 aaKnown RBP7.41□□□□□ -1.22
TDP1-207ENST00000553617 TMUB1Q9BVT8 246 aa7.41□□□□□ -1.22
TDP1-207ENST00000553617 REPIN1Q9BWE0 567 aaKnown RBP7.41□□□□□ -1.22
TDP1-207ENST00000553617 NPDC1Q9NQX5 325 aaPredicted RBP7.41□□□□□ -1.22
TDP1-207ENST00000553617 EN1Q05925 392 aaPredicted RBP7.4□□□□□ -1.22
TDP1-207ENST00000553617 TTLL12Q14166 644 aaPredicted RBP7.4□□□□□ -1.22
TDP1-207ENST00000553617 CDHR5Q9HBB8 845 aa7.4□□□□□ -1.22
TDP1-207ENST00000553617 PHF14O94880 888 aa7.38□□□□□ -1.23
TDP1-207ENST00000553617 HOXB1P14653 301 aaPredicted RBP7.38□□□□□ -1.23
TDP1-207ENST00000553617 EPAS1Q99814 870 aa7.38□□□□□ -1.23
TDP1-207ENST00000553617 FLIIQ13045 1269 aa7.37□□□□□ -1.23
TDP1-207ENST00000553617 DOK7Q18PE1 504 aa7.36□□□□□ -1.23
TDP1-207ENST00000553617 C1orf115Q9H7X2 142 aa7.36□□□□□ -1.23
TDP1-207ENST00000553617 UBTFP17480 764 aaKnown RBP7.35□□□□□ -1.23
TDP1-207ENST00000553617 ZNF710Q8N1W2 664 aa7.35□□□□□ -1.23
TDP1-207ENST00000553617 PCDHGA10Q9Y5H3 936 aa7.35□□□□□ -1.23
TDP1-207ENST00000553617 CLCN1P35523 988 aa7.34□□□□□ -1.23
TDP1-207ENST00000553617 SH3D19Q5HYK7 790 aa7.34□□□□□ -1.23
TDP1-207ENST00000553617 PHOX2BQ99453 314 aa7.34□□□□□ -1.23
TDP1-207ENST00000553617 KDM4FA0A1W2PPD8 638 aa7.33□□□□□ -1.24
TDP1-207ENST00000553617 MAP3K7O43318 606 aa7.33□□□□□ -1.24
TDP1-207ENST00000553617 PCMTD1Q96MG8 357 aaPredicted RBP7.33□□□□□ -1.24
TDP1-207ENST00000553617 GPCPD1Q9NPB8 672 aa7.33□□□□□ -1.24
TDP1-207ENST00000553617 TSR1Q2NL82 804 aaKnown RBP7.32□□□□□ -1.24
TDP1-207ENST00000553617 TYW1BQ6NUM6 668 aa7.32□□□□□ -1.24
TDP1-207ENST00000553617 ERBB3P21860 1342 aa7.31□□□□□ -1.24
TDP1-207ENST00000553617 RIMBP2O15034 1052 aa7.31□□□□□ -1.24
TDP1-207ENST00000553617 MDM2Q00987 491 aaPredicted RBP7.31□□□□□ -1.24
TDP1-207ENST00000553617 JPH4Q96JJ6 628 aa7.31□□□□□ -1.24
TDP1-207ENST00000553617 A6NJR5 290 aa7.3□□□□□ -1.24
TDP1-207ENST00000553617 FBXW7Q969H0 707 aa7.3□□□□□ -1.24
TDP1-207ENST00000553617 RBM33Q96EV2 1170 aaKnown RBP7.3□□□□□ -1.24
TDP1-207ENST00000553617 PCDHGA4Q9Y5G9 962 aa7.3□□□□□ -1.24
TDP1-207ENST00000553617 SSTR3P32745 418 aaPredicted RBP7.29□□□□□ -1.24
TDP1-207ENST00000553617 MCM6Q14566 821 aa7.29□□□□□ -1.24
TDP1-207ENST00000553617 SKIV2LQ15477 1246 aaKnown RBP7.29□□□□□ -1.24
TDP1-207ENST00000553617 METTL3Q86U44 580 aaKnown RBP7.29□□□□□ -1.24
TDP1-207ENST00000553617 KHSRPQ92945 711 aaKnown RBP eCLIP7.29□□□□□ -1.24
TDP1-207ENST00000553617 ZSWIM6Q9HCJ5 1215 aa7.29□□□□□ -1.24
TDP1-207ENST00000553617 FAM217BQ9NTX9 383 aaPredicted RBP7.29□□□□□ -1.24
TDP1-207ENST00000553617 TTC13Q8NBP0 860 aa7.28□□□□□ -1.24
TDP1-207ENST00000553617 ARID3CA6NKF2 412 aa7.27□□□□□ -1.25
TDP1-207ENST00000553617 FOSBP53539 338 aa7.27□□□□□ -1.25
TDP1-207ENST00000553617 VARS2Q5ST30 1063 aaKnown RBP7.27□□□□□ -1.25
TDP1-207ENST00000553617 PXYLP1Q8TE99 480 aa7.27□□□□□ -1.25
TDP1-207ENST00000553617 CLUAP1Q96AJ1 413 aa7.27□□□□□ -1.25
TDP1-207ENST00000553617 RBM27Q9P2N5 1060 aaKnown RBP7.27□□□□□ -1.25
TDP1-207ENST00000553617 ADGRG1Q9Y653 693 aa7.27□□□□□ -1.25
TDP1-207ENST00000553617 APBB1O00213 710 aa7.26□□□□□ -1.25
TDP1-207ENST00000553617 OATP04181 439 aa7.26□□□□□ -1.25
TDP1-207ENST00000553617 GPR153Q6NV75 609 aa7.26□□□□□ -1.25
TDP1-207ENST00000553617 PADI6Q6TGC4 694 aa7.26□□□□□ -1.25
TDP1-207ENST00000553617 CERKQ8TCT0 537 aa7.26□□□□□ -1.25
TDP1-207ENST00000553617 BEGAINQ9BUH8 593 aa7.26□□□□□ -1.25
TDP1-207ENST00000553617 TRAK2O60296 914 aa7.25□□□□□ -1.25
TDP1-207ENST00000553617 FAM161AQ3B820 660 aa7.25□□□□□ -1.25
TDP1-207ENST00000553617 C6orf132Q5T0Z8 1188 aa7.24□□□□□ -1.25
TDP1-207ENST00000553617 ARID3AQ99856 593 aa7.24□□□□□ -1.25
TDP1-207ENST00000553617 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.24□□□□□ -1.25
TDP1-207ENST00000553617 MYSM1Q5VVJ2 828 aa7.23□□□□□ -1.25
TDP1-207ENST00000553617 ZNF687Q8N1G0 1237 aa7.23□□□□□ -1.25
TDP1-207ENST00000553617 PROCA1Q8NCQ7 364 aaPredicted RBP7.23□□□□□ -1.25
TDP1-207ENST00000553617 NLRP7Q8WX94 980 aa7.23□□□□□ -1.25
TDP1-207ENST00000553617 NUDT7P0C024 238 aa7.22□□□□□ -1.25
TDP1-207ENST00000553617 ZDHHC16Q969W1 377 aa7.22□□□□□ -1.25
TDP1-207ENST00000553617 ARSIQ5FYB1 569 aa7.21□□□□□ -1.26
TDP1-207ENST00000553617 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.26
TDP1-207ENST00000553617 CLK2P49760 499 aaKnown RBP7.2□□□□□ -1.26
TDP1-207ENST00000553617 CCDC82Q8N4S0 544 aa7.2□□□□□ -1.26
TDP1-207ENST00000553617 ZNF454Q8N9F8 522 aa7.2□□□□□ -1.26
TDP1-207ENST00000553617 RNF166Q96A37 237 aaPredicted RBP7.2□□□□□ -1.26
TDP1-207ENST00000553617 ADAM33Q9BZ11 813 aa7.2□□□□□ -1.26
TDP1-207ENST00000553617 PRSS12P56730 875 aa7.19□□□□□ -1.26
TDP1-207ENST00000553617 PROSER2Q86WR7 435 aaPredicted RBP7.19□□□□□ -1.26
TDP1-207ENST00000553617 POLR3EQ9NVU0 708 aa7.19□□□□□ -1.26
TDP1-207ENST00000553617 SPDYE5A6NIY4 337 aa7.18□□□□□ -1.26
TDP1-207ENST00000553617 FBXO31Q5XUX0 539 aaPredicted RBP7.18□□□□□ -1.26
TDP1-207ENST00000553617 POM121Q96HA1 1249 aa7.18□□□□□ -1.26
TDP1-207ENST00000553617 PODXL2Q9NZ53 605 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms