RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 PKD2Q13563 968 aa25.93■■□□□ 1.74
XRCC3-204ENST00000553361 MIA2Q96PC5 1412 aa25.93■■□□□ 1.74
XRCC3-204ENST00000553361 TNRQ92752 1358 aa25.9■■□□□ 1.74
XRCC3-204ENST00000553361 CEP170BQ9Y4F5 1589 aaPredicted RBP25.88■■□□□ 1.73
XRCC3-204ENST00000553361 MYO3AQ8NEV4 1616 aa25.87■■□□□ 1.73
XRCC3-204ENST00000553361 KDM5DQ9BY66 1539 aa25.87■■□□□ 1.73
XRCC3-204ENST00000553361 ZNF335Q9H4Z2 1342 aaPredicted RBP25.86■■□□□ 1.73
XRCC3-204ENST00000553361 A2ML1A8K2U0 1454 aa25.85■■□□□ 1.73
XRCC3-204ENST00000553361 PLA2R1Q13018 1463 aa25.85■■□□□ 1.73
XRCC3-204ENST00000553361 PZPP20742 1482 aa25.85■■□□□ 1.73
XRCC3-204ENST00000553361 RRP7BPQ9NSQ0 103 aa25.83■■□□□ 1.73
XRCC3-204ENST00000553361 LTBP4Q8N2S1 1624 aa25.83■■□□□ 1.73
XRCC3-204ENST00000553361 TCOF1Q13428 1488 aaKnown RBP25.81■■□□□ 1.72
XRCC3-204ENST00000553361 MAST1Q9Y2H9 1570 aa25.81■■□□□ 1.72
XRCC3-204ENST00000553361 FAM135AQ9P2D6 1515 aa25.8■■□□□ 1.72
XRCC3-204ENST00000553361 ZNF142P52746 1687 aaPredicted RBP25.8■■□□□ 1.72
XRCC3-204ENST00000553361 THEMISQ8N1K5 641 aaPredicted RBP25.79■■□□□ 1.72
XRCC3-204ENST00000553361 ABCC5O15440 1437 aa25.79■■□□□ 1.72
XRCC3-204ENST00000553361 ANKLE2Q86XL3 938 aa25.77■■□□□ 1.72
XRCC3-204ENST00000553361 DNMT1P26358 1616 aaKnown RBP25.77■■□□□ 1.72
XRCC3-204ENST00000553361 CHIC2Q9UKJ5 165 aa25.76■■□□□ 1.71
XRCC3-204ENST00000553361 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.76■■□□□ 1.713e-6■■■■□ 21.3
XRCC3-204ENST00000553361 KIF15Q9NS87 1388 aa25.76■■□□□ 1.71
XRCC3-204ENST00000553361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.75■■□□□ 1.71
XRCC3-204ENST00000553361 ABCC3O15438 1527 aa25.73■■□□□ 1.71
XRCC3-204ENST00000553361 FGD6Q6ZV73 1430 aa25.73■■□□□ 1.71
XRCC3-204ENST00000553361 DUOX2Q9NRD8 1548 aa25.73■■□□□ 1.71
XRCC3-204ENST00000553361 PTPN23Q9H3S7 1636 aa25.71■■□□□ 1.71
XRCC3-204ENST00000553361 NLRP1Q9C000 1473 aa25.71■■□□□ 1.71
XRCC3-204ENST00000553361 RNF17Q9BXT8 1623 aaKnown RBP25.7■■□□□ 1.71
XRCC3-204ENST00000553361 UBAP1LF5GYI3 381 aa25.7■■□□□ 1.7
XRCC3-204ENST00000553361 DAPK1P53355 1430 aa25.7■■□□□ 1.7
XRCC3-204ENST00000553361 IQSEC2Q5JU85 1478 aa25.69■■□□□ 1.7
XRCC3-204ENST00000553361 SHANK2Q9UPX8 1470 aa25.67■■□□□ 1.7
XRCC3-204ENST00000553361 FAM50AQ14320 339 aaKnown RBP25.67■■□□□ 1.7
XRCC3-204ENST00000553361 UGGT1Q9NYU2 1555 aa25.67■■□□□ 1.7
XRCC3-204ENST00000553361 EIF2AK4Q9P2K8 1649 aaKnown RBP25.66■■□□□ 1.7
XRCC3-204ENST00000553361 ERVK-7P63135 1459 aa25.65■■□□□ 1.7
XRCC3-204ENST00000553361 ERBINQ96RT1 1412 aa25.64■■□□□ 1.7
XRCC3-204ENST00000553361 ANKRD30AQ9BXX3 1397 aa25.64■■□□□ 1.69
XRCC3-204ENST00000553361 MROH1Q8NDA8 1641 aa25.63■■□□□ 1.69
XRCC3-204ENST00000553361 SPATA31D1Q6ZQQ2 1576 aa25.61■■□□□ 1.69
XRCC3-204ENST00000553361 KANK1Q14678 1352 aa25.6■■□□□ 1.69
XRCC3-204ENST00000553361 NPHP4O75161 1426 aaPredicted RBP25.6■■□□□ 1.69
XRCC3-204ENST00000553361 NEURL4Q96JN8 1562 aa25.6■■□□□ 1.69
XRCC3-204ENST00000553361 ZC3H13Q5T200 1668 aaKnown RBP25.59■■□□□ 1.69
XRCC3-204ENST00000553361 DISP3Q9P2K9 1392 aa25.57■■□□□ 1.68
XRCC3-204ENST00000553361 ARHGAP31Q2M1Z3 1444 aa25.55■■□□□ 1.68
XRCC3-204ENST00000553361 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
XRCC3-204ENST00000553361 CEP152O94986 1710 aa25.54■■□□□ 1.68
XRCC3-204ENST00000553361 MED14O60244 1454 aa25.54■■□□□ 1.68
XRCC3-204ENST00000553361 TXNDC2Q86VQ3 553 aa25.54■■□□□ 1.68
XRCC3-204ENST00000553361 SCAF1Q9H7N4 1312 aaKnown RBP25.54■■□□□ 1.68
XRCC3-204ENST00000553361 PRDM15P57071 1507 aaPredicted RBP25.53■■□□□ 1.68
XRCC3-204ENST00000553361 STAG3Q9UJ98 1225 aa25.53■■□□□ 1.68
XRCC3-204ENST00000553361 POLR1AO95602 1720 aaPredicted RBP25.52■■□□□ 1.68
XRCC3-204ENST00000553361 LTKP29376 864 aa25.52■■□□□ 1.68
XRCC3-204ENST00000553361 PIP4K2BP78356 416 aa25.52■■□□□ 1.68
XRCC3-204ENST00000553361 TOM1O60784 492 aa25.5■■□□□ 1.67
XRCC3-204ENST00000553361 CPS1P31327 1500 aa25.5■■□□□ 1.67
XRCC3-204ENST00000553361 CFAP65Q6ZU64 1925 aaKnown RBP25.5■■□□□ 1.67
XRCC3-204ENST00000553361 IDI1Q13907 227 aa25.49■■□□□ 1.67
XRCC3-204ENST00000553361 EID1Q9Y6B2 187 aa25.49■■□□□ 1.67
XRCC3-204ENST00000553361 PPARGC1BQ86YN6 1023 aaKnown RBP25.48■■□□□ 1.67
XRCC3-204ENST00000553361 DEPDC5O75140 1603 aa25.48■■□□□ 1.67
XRCC3-204ENST00000553361 VWDEQ8N2E2 1590 aa25.47■■□□□ 1.67
XRCC3-204ENST00000553361 ADGRL2O95490 1459 aa25.46■■□□□ 1.67
XRCC3-204ENST00000553361 ANKRD50Q9ULJ7 1429 aa25.45■■□□□ 1.66
XRCC3-204ENST00000553361 SCAF11Q99590 1463 aaKnown RBP25.44■■□□□ 1.66
XRCC3-204ENST00000553361 ILDR2Q71H61 639 aa25.43■■□□□ 1.66
XRCC3-204ENST00000553361 LMTK2Q8IWU2 1503 aa25.42■■□□□ 1.66
XRCC3-204ENST00000553361 IQGAP1P46940 1657 aa25.42■■□□□ 1.66
XRCC3-204ENST00000553361 HSPA1LP34931 641 aa25.41■■□□□ 1.66
XRCC3-204ENST00000553361 TMEM2Q9UHN6 1383 aa25.41■■□□□ 1.66
XRCC3-204ENST00000553361 ARHGAP23Q9P227 1491 aa25.4■■□□□ 1.66
XRCC3-204ENST00000553361 UBR1Q8IWV7 1749 aa25.4■■□□□ 1.66
XRCC3-204ENST00000553361 ITGAEP38570 1179 aa25.4■■□□□ 1.66
XRCC3-204ENST00000553361 SLIT1O75093 1534 aa25.38■■□□□ 1.65
XRCC3-204ENST00000553361 SLC52A1Q9NWF4 448 aa25.38■■□□□ 1.65
XRCC3-204ENST00000553361 NOS1P29475 1434 aa25.36■■□□□ 1.65
XRCC3-204ENST00000553361 PIK3C2BO00750 1634 aa25.34■■□□□ 1.65
XRCC3-204ENST00000553361 LRRC7Q96NW7 1537 aa25.34■■□□□ 1.65
XRCC3-204ENST00000553361 EFCAB6Q5THR3 1501 aa25.32■■□□□ 1.64
XRCC3-204ENST00000553361 BCANQ96GW7 911 aa25.32■■□□□ 1.64
XRCC3-204ENST00000553361 SLC26A8Q96RN1 970 aa25.32■■□□□ 1.64
XRCC3-204ENST00000553361 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
XRCC3-204ENST00000553361 SYNMO15061 1565 aa25.3■■□□□ 1.64
XRCC3-204ENST00000553361 ROCK1Q13464 1354 aa25.29■■□□□ 1.64
XRCC3-204ENST00000553361 STRCP1A6NGW2 1772 aa25.27■■□□□ 1.64
XRCC3-204ENST00000553361 CHGAP10645 457 aaKnown RBP25.27■■□□□ 1.64
XRCC3-204ENST00000553361 RPRD2Q5VT52 1461 aaKnown RBP25.26■■□□□ 1.63
XRCC3-204ENST00000553361 KCNA6P17658 529 aa25.24■■□□□ 1.63
XRCC3-204ENST00000553361 NUP155O75694 1391 aa25.23■■□□□ 1.63
XRCC3-204ENST00000553361 PPP1R15AO75807 674 aaPredicted RBP25.23■■□□□ 1.63
XRCC3-204ENST00000553361 ALKQ9UM73 1620 aa25.23■■□□□ 1.63
XRCC3-204ENST00000553361 SOCS7O14512 581 aa25.22■■□□□ 1.63
XRCC3-204ENST00000553361 HDGFP51858 240 aaKnown RBP25.22■■□□□ 1.63
XRCC3-204ENST00000553361 PROSER2Q86WR7 435 aaPredicted RBP25.22■■□□□ 1.63
XRCC3-204ENST00000553361 RBM33Q96EV2 1170 aaKnown RBP25.22■■□□□ 1.63
XRCC3-204ENST00000553361 ADGRB3O60242 1522 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms