RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ABCC5O15440 1437 aa20.13■□□□□ 0.81
ACTN1-207ENST00000553290 WASHC2CQ9Y4E1 1318 aa20.13■□□□□ 0.81
ACTN1-207ENST00000553290 CROCC2H7BZ55 1655 aa20.13■□□□□ 0.81
ACTN1-207ENST00000553290 EIF2AK4Q9P2K8 1649 aaKnown RBP20.13■□□□□ 0.81
ACTN1-207ENST00000553290 DNMT1P26358 1616 aaKnown RBP20.12■□□□□ 0.81
ACTN1-207ENST00000553290 DUOX2Q9NRD8 1548 aa20.12■□□□□ 0.81
ACTN1-207ENST00000553290 RNF17Q9BXT8 1623 aaKnown RBP20.11■□□□□ 0.81
ACTN1-207ENST00000553290 DAPK1P53355 1430 aa20.1■□□□□ 0.81
ACTN1-207ENST00000553290 MYO3AQ8NEV4 1616 aa20.09■□□□□ 0.81
ACTN1-207ENST00000553290 ZNF142P52746 1687 aaPredicted RBP20.09■□□□□ 0.81
ACTN1-207ENST00000553290 PZPP20742 1482 aa20.08■□□□□ 0.81
ACTN1-207ENST00000553290 KIF15Q9NS87 1388 aa20.08■□□□□ 0.8
ACTN1-207ENST00000553290 NCOA1Q15788 1441 aa20.07■□□□□ 0.8
ACTN1-207ENST00000553290 CAMSAP1Q5T5Y3 1602 aa20.06■□□□□ 0.8
ACTN1-207ENST00000553290 PTPRTO14522 1441 aa20.06■□□□□ 0.8
ACTN1-207ENST00000553290 RRP7BPQ9NSQ0 103 aa20.06■□□□□ 0.8
ACTN1-207ENST00000553290 CEP170BQ9Y4F5 1589 aaPredicted RBP20.06■□□□□ 0.8
ACTN1-207ENST00000553290 ZC3H13Q5T200 1668 aaKnown RBP20.06■□□□□ 0.8
ACTN1-207ENST00000553290 ERBINQ96RT1 1412 aa20.05■□□□□ 0.8
ACTN1-207ENST00000553290 FBXO41Q8TF61 875 aa20.05■□□□□ 0.8
ACTN1-207ENST00000553290 FBXO31Q5XUX0 539 aaPredicted RBP20.04■□□□□ 0.8
ACTN1-207ENST00000553290 TNRQ92752 1358 aa20.04■□□□□ 0.8
ACTN1-207ENST00000553290 ANKRD30AQ9BXX3 1397 aa20.04■□□□□ 0.8
ACTN1-207ENST00000553290 A2ML1A8K2U0 1454 aa20.03■□□□□ 0.8
ACTN1-207ENST00000553290 ABCC3O15438 1527 aa20.02■□□□□ 0.8
ACTN1-207ENST00000553290 MROH1Q8NDA8 1641 aa20.02■□□□□ 0.8
ACTN1-207ENST00000553290 FAM50AQ14320 339 aaKnown RBP20.02■□□□□ 0.8
ACTN1-207ENST00000553290 PLA2R1Q13018 1463 aa20.01■□□□□ 0.79
ACTN1-207ENST00000553290 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
ACTN1-207ENST00000553290 CERKQ8TCT0 537 aa20■□□□□ 0.79
ACTN1-207ENST00000553290 PKD2Q13563 968 aa19.99■□□□□ 0.79
ACTN1-207ENST00000553290 PRDM15P57071 1507 aaPredicted RBP19.98■□□□□ 0.79
ACTN1-207ENST00000553290 ADGRL2O95490 1459 aa19.98■□□□□ 0.79
ACTN1-207ENST00000553290 CEP152O94986 1710 aa19.97■□□□□ 0.79
ACTN1-207ENST00000553290 NLRP1Q9C000 1473 aa19.97■□□□□ 0.79
ACTN1-207ENST00000553290 NCKAP5LQ9HCH0 1330 aa19.97■□□□□ 0.79
ACTN1-207ENST00000553290 DEPDC5O75140 1603 aa19.95■□□□□ 0.78
ACTN1-207ENST00000553290 SPATA31D1Q6ZQQ2 1576 aa19.95■□□□□ 0.78
ACTN1-207ENST00000553290 KANK1Q14678 1352 aa19.95■□□□□ 0.78
ACTN1-207ENST00000553290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.93■□□□□ 0.783e-7■□□□□ 9.1
ACTN1-207ENST00000553290 ARHGAP31Q2M1Z3 1444 aa19.93■□□□□ 0.78
ACTN1-207ENST00000553290 ERVK-7P63135 1459 aa19.92■□□□□ 0.78
ACTN1-207ENST00000553290 THEMISQ8N1K5 641 aaPredicted RBP19.92■□□□□ 0.78
ACTN1-207ENST00000553290 UGGT1Q9NYU2 1555 aa19.91■□□□□ 0.78
ACTN1-207ENST00000553290 CFAP65Q6ZU64 1925 aaKnown RBP19.9■□□□□ 0.78
ACTN1-207ENST00000553290 ANKRD50Q9ULJ7 1429 aa19.88■□□□□ 0.77
ACTN1-207ENST00000553290 PPARGC1BQ86YN6 1023 aaKnown RBP19.88■□□□□ 0.77
ACTN1-207ENST00000553290 LTBP4Q8N2S1 1624 aa19.87■□□□□ 0.77
ACTN1-207ENST00000553290 VWDEQ8N2E2 1590 aa19.87■□□□□ 0.77
ACTN1-207ENST00000553290 LMTK2Q8IWU2 1503 aa19.87■□□□□ 0.77
ACTN1-207ENST00000553290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.87■□□□□ 0.77
ACTN1-207ENST00000553290 ANKLE2Q86XL3 938 aa19.87■□□□□ 0.77
ACTN1-207ENST00000553290 POLR1AO95602 1720 aaPredicted RBP19.87■□□□□ 0.77
ACTN1-207ENST00000553290 ROCK1Q13464 1354 aa19.85■□□□□ 0.77
ACTN1-207ENST00000553290 NEURL4Q96JN8 1562 aa19.83■□□□□ 0.76
ACTN1-207ENST00000553290 ZNF335Q9H4Z2 1342 aaPredicted RBP19.81■□□□□ 0.76
ACTN1-207ENST00000553290 IQSEC2Q5JU85 1478 aa19.81■□□□□ 0.76
ACTN1-207ENST00000553290 UBR1Q8IWV7 1749 aa19.8■□□□□ 0.76
ACTN1-207ENST00000553290 EFCAB6Q5THR3 1501 aa19.8■□□□□ 0.76
ACTN1-207ENST00000553290 MED14O60244 1454 aa19.79■□□□□ 0.76
ACTN1-207ENST00000553290 ITGAEP38570 1179 aa19.79■□□□□ 0.76
ACTN1-207ENST00000553290 NPHP4O75161 1426 aaPredicted RBP19.77■□□□□ 0.76
ACTN1-207ENST00000553290 UNC13BO14795 1591 aa19.76■□□□□ 0.75
ACTN1-207ENST00000553290 RPRD2Q5VT52 1461 aaKnown RBP19.76■□□□□ 0.75
ACTN1-207ENST00000553290 NOS1P29475 1434 aa19.76■□□□□ 0.75
ACTN1-207ENST00000553290 RRBP1Q9P2E9 1410 aaKnown RBP19.76■□□□□ 0.75
ACTN1-207ENST00000553290 PIK3C2BO00750 1634 aa19.75■□□□□ 0.75
ACTN1-207ENST00000553290 TET3O43151 1660 aa19.75■□□□□ 0.75
ACTN1-207ENST00000553290 STAG3Q9UJ98 1225 aa19.74■□□□□ 0.75
ACTN1-207ENST00000553290 IQGAP1P46940 1657 aa19.74■□□□□ 0.75
ACTN1-207ENST00000553290 ARHGAP23Q9P227 1491 aa19.73■□□□□ 0.75
ACTN1-207ENST00000553290 SLIT1O75093 1534 aa19.73■□□□□ 0.75
ACTN1-207ENST00000553290 KDM5AP29375 1690 aaKnown RBP19.73■□□□□ 0.75
ACTN1-207ENST00000553290 IDI1Q13907 227 aa19.73■□□□□ 0.75
ACTN1-207ENST00000553290 SYNMO15061 1565 aa19.73■□□□□ 0.75
ACTN1-207ENST00000553290 SLC52A1Q9NWF4 448 aa19.72■□□□□ 0.75
ACTN1-207ENST00000553290 SCAF11Q99590 1463 aaKnown RBP19.72■□□□□ 0.75
ACTN1-207ENST00000553290 GCC2Q8IWJ2 1684 aa19.71■□□□□ 0.75
ACTN1-207ENST00000553290 EID1Q9Y6B2 187 aa19.71■□□□□ 0.75
ACTN1-207ENST00000553290 CPS1P31327 1500 aa19.71■□□□□ 0.75
ACTN1-207ENST00000553290 TXNDC2Q86VQ3 553 aa19.7■□□□□ 0.74
ACTN1-207ENST00000553290 LTKP29376 864 aa19.69■□□□□ 0.74
ACTN1-207ENST00000553290 IQGAP3Q86VI3 1631 aa19.69■□□□□ 0.74
ACTN1-207ENST00000553290 TMEM2Q9UHN6 1383 aa19.69■□□□□ 0.74
ACTN1-207ENST00000553290 NUP155O75694 1391 aa19.67■□□□□ 0.74
ACTN1-207ENST00000553290 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
ACTN1-207ENST00000553290 E9PCH4 1651 aa19.65■□□□□ 0.74
ACTN1-207ENST00000553290 UBAP1LF5GYI3 381 aa19.63■□□□□ 0.73
ACTN1-207ENST00000553290 NAIPQ13075 1403 aa19.59■□□□□ 0.73
ACTN1-207ENST00000553290 STRCP1A6NGW2 1772 aa19.58■□□□□ 0.73
ACTN1-207ENST00000553290 HDGFP51858 240 aaKnown RBP19.58■□□□□ 0.72
ACTN1-207ENST00000553290 TMEM131LA2VDJ0 1609 aa19.58■□□□□ 0.72
ACTN1-207ENST00000553290 MYO5BQ9ULV0 1848 aa19.57■□□□□ 0.72
ACTN1-207ENST00000553290 TOM1O60784 492 aa19.56■□□□□ 0.72
ACTN1-207ENST00000553290 HFM1A2PYH4 1435 aa19.55■□□□□ 0.72
ACTN1-207ENST00000553290 LRRC7Q96NW7 1537 aa19.55■□□□□ 0.72
ACTN1-207ENST00000553290 ZFYVE9O95405 1425 aa19.54■□□□□ 0.72
ACTN1-207ENST00000553290 CHGAP10645 457 aaKnown RBP19.54■□□□□ 0.72
ACTN1-207ENST00000553290 RIMS2Q9UQ26 1411 aa19.53■□□□□ 0.72
ACTN1-207ENST00000553290 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms