RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 PPARGC1BQ86YN6 1023 aaKnown RBP18.04■□□□□ 0.48
TRAFD1-209ENST00000552896 DEPDC5O75140 1603 aa18.03■□□□□ 0.48
TRAFD1-209ENST00000552896 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
TRAFD1-209ENST00000552896 ERBINQ96RT1 1412 aa18.02■□□□□ 0.48
TRAFD1-209ENST00000552896 CNTLNQ9NXG0 1405 aa18.01■□□□□ 0.47
TRAFD1-209ENST00000552896 KIF15Q9NS87 1388 aa18.01■□□□□ 0.47
TRAFD1-209ENST00000552896 MROH1Q8NDA8 1641 aa18.01■□□□□ 0.47
TRAFD1-209ENST00000552896 ANKRD30AQ9BXX3 1397 aa18■□□□□ 0.47
TRAFD1-209ENST00000552896 PRDM15P57071 1507 aaPredicted RBP17.99■□□□□ 0.47
TRAFD1-209ENST00000552896 KDM5DQ9BY66 1539 aa17.99■□□□□ 0.47
TRAFD1-209ENST00000552896 MLECQ14165 292 aa17.99■□□□□ 0.47
TRAFD1-209ENST00000552896 CEP152O94986 1710 aa17.98■□□□□ 0.47
TRAFD1-209ENST00000552896 NCOA1Q15788 1441 aa17.98■□□□□ 0.47
TRAFD1-209ENST00000552896 GCC2Q8IWJ2 1684 aa17.96■□□□□ 0.47
TRAFD1-209ENST00000552896 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
TRAFD1-209ENST00000552896 PTPRKQ15262 1439 aa17.96■□□□□ 0.47
TRAFD1-209ENST00000552896 ROCK1Q13464 1354 aa17.95■□□□□ 0.46
TRAFD1-209ENST00000552896 SETD1BQ9UPS6 1966 aaKnown RBP17.93■□□□□ 0.46
TRAFD1-209ENST00000552896 CAMSAP1Q5T5Y3 1602 aa17.93■□□□□ 0.46
TRAFD1-209ENST00000552896 UNC13BO14795 1591 aa17.91■□□□□ 0.46
TRAFD1-209ENST00000552896 KIF3BO15066 747 aa17.91■□□□□ 0.46
TRAFD1-209ENST00000552896 ABCC3O15438 1527 aa17.91■□□□□ 0.46
TRAFD1-209ENST00000552896 CHIC2Q9UKJ5 165 aa17.9■□□□□ 0.46
TRAFD1-209ENST00000552896 VWDEQ8N2E2 1590 aa17.89■□□□□ 0.45
TRAFD1-209ENST00000552896 ESF1Q9H501 851 aaKnown RBP17.89■□□□□ 0.45
TRAFD1-209ENST00000552896 RRP7BPQ9NSQ0 103 aa17.89■□□□□ 0.45
TRAFD1-209ENST00000552896 ZNF142P52746 1687 aaPredicted RBP17.88■□□□□ 0.45
TRAFD1-209ENST00000552896 GGT6Q6P531 493 aa17.88■□□□□ 0.45
TRAFD1-209ENST00000552896 ANKRD50Q9ULJ7 1429 aa17.88■□□□□ 0.45
TRAFD1-209ENST00000552896 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
TRAFD1-209ENST00000552896 NPATQ14207 1427 aa17.87■□□□□ 0.45
TRAFD1-209ENST00000552896 PZPP20742 1482 aa17.86■□□□□ 0.45
TRAFD1-209ENST00000552896 LMTK3Q96Q04 1460 aa17.85■□□□□ 0.45
TRAFD1-209ENST00000552896 LMTK2Q8IWU2 1503 aa17.84■□□□□ 0.45
TRAFD1-209ENST00000552896 ZMYM3Q14202 1370 aa17.84■□□□□ 0.45
TRAFD1-209ENST00000552896 TET3O43151 1660 aa17.83■□□□□ 0.45
TRAFD1-209ENST00000552896 IQGAP3Q86VI3 1631 aa17.83■□□□□ 0.45
TRAFD1-209ENST00000552896 EFCAB6Q5THR3 1501 aa17.82■□□□□ 0.44
TRAFD1-209ENST00000552896 CFAP65Q6ZU64 1925 aaKnown RBP17.81■□□□□ 0.44
TRAFD1-209ENST00000552896 ITGAEP38570 1179 aa17.81■□□□□ 0.44
TRAFD1-209ENST00000552896 HFM1A2PYH4 1435 aa17.81■□□□□ 0.44
TRAFD1-209ENST00000552896 WASHC2CQ9Y4E1 1318 aa17.8■□□□□ 0.44
TRAFD1-209ENST00000552896 SPATA31D1Q6ZQQ2 1576 aa17.8■□□□□ 0.44
TRAFD1-209ENST00000552896 KANK1Q14678 1352 aa17.79■□□□□ 0.44
TRAFD1-209ENST00000552896 CEBPAP49715 358 aaPredicted RBP17.79■□□□□ 0.44
TRAFD1-209ENST00000552896 UHRF1BP1Q6BDS2 1440 aa17.79■□□□□ 0.44
TRAFD1-209ENST00000552896 NAIPQ13075 1403 aa17.78■□□□□ 0.44
TRAFD1-209ENST00000552896 ARHGAP31Q2M1Z3 1444 aa17.78■□□□□ 0.44
TRAFD1-209ENST00000552896 CEP170BQ9Y4F5 1589 aaPredicted RBP17.78■□□□□ 0.44
TRAFD1-209ENST00000552896 ERVK-7P63135 1459 aa17.75■□□□□ 0.43
TRAFD1-209ENST00000552896 E9PCH4 1651 aa17.75■□□□□ 0.43
TRAFD1-209ENST00000552896 RPRD2Q5VT52 1461 aaKnown RBP17.73■□□□□ 0.43
TRAFD1-209ENST00000552896 NLRP1Q9C000 1473 aa17.71■□□□□ 0.43
TRAFD1-209ENST00000552896 TNRQ92752 1358 aa17.71■□□□□ 0.43
TRAFD1-209ENST00000552896 KDM5AP29375 1690 aaKnown RBP17.71■□□□□ 0.42
TRAFD1-209ENST00000552896 A2ML1A8K2U0 1454 aa17.7■□□□□ 0.42
TRAFD1-209ENST00000552896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.425e-6■■■□□ 14.8
TRAFD1-209ENST00000552896 STRCQ7RTU9 1775 aa17.7■□□□□ 0.42
TRAFD1-209ENST00000552896 SYNMO15061 1565 aa17.7■□□□□ 0.42
TRAFD1-209ENST00000552896 POLR1AO95602 1720 aaPredicted RBP17.69■□□□□ 0.42
TRAFD1-209ENST00000552896 SPHKAPQ2M3C7 1700 aa17.69■□□□□ 0.42
TRAFD1-209ENST00000552896 UBR1Q8IWV7 1749 aa17.69■□□□□ 0.42
TRAFD1-209ENST00000552896 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
TRAFD1-209ENST00000552896 FBXO31Q5XUX0 539 aaPredicted RBP17.65■□□□□ 0.42
TRAFD1-209ENST00000552896 UGGT1Q9NYU2 1555 aa17.65■□□□□ 0.42
TRAFD1-209ENST00000552896 NUP155O75694 1391 aa17.65■□□□□ 0.42
TRAFD1-209ENST00000552896 NOS1P29475 1434 aa17.64■□□□□ 0.42
TRAFD1-209ENST00000552896 PLA2R1Q13018 1463 aa17.64■□□□□ 0.41
TRAFD1-209ENST00000552896 MYO5BQ9ULV0 1848 aa17.63■□□□□ 0.41
TRAFD1-209ENST00000552896 ADGRB3O60242 1522 aa17.61■□□□□ 0.41
TRAFD1-209ENST00000552896 HSPA2P54652 639 aa17.6■□□□□ 0.41
TRAFD1-209ENST00000552896 SETD5Q9C0A6 1442 aa17.59■□□□□ 0.41
TRAFD1-209ENST00000552896 TRPM2O94759 1503 aa17.57■□□□□ 0.4
TRAFD1-209ENST00000552896 NEURL4Q96JN8 1562 aa17.57■□□□□ 0.4
TRAFD1-209ENST00000552896 TMEM131LA2VDJ0 1609 aa17.55■□□□□ 0.4
TRAFD1-209ENST00000552896 ACIN1Q9UKV3 1341 aaKnown RBP17.55■□□□□ 0.4
TRAFD1-209ENST00000552896 SLIT1O75093 1534 aa17.55■□□□□ 0.4
TRAFD1-209ENST00000552896 KIF1BO60333 1816 aa17.54■□□□□ 0.4
TRAFD1-209ENST00000552896 PTPRTO14522 1441 aa17.54■□□□□ 0.4
TRAFD1-209ENST00000552896 CLTCL1P53675 1640 aa17.54■□□□□ 0.4
TRAFD1-209ENST00000552896 RAB3GAP2Q9H2M9 1393 aa17.53■□□□□ 0.4
TRAFD1-209ENST00000552896 IQGAP1P46940 1657 aa17.53■□□□□ 0.4
TRAFD1-209ENST00000552896 ARHGAP23Q9P227 1491 aa17.52■□□□□ 0.4
TRAFD1-209ENST00000552896 TRIM52Q96A61 297 aa17.5■□□□□ 0.39
TRAFD1-209ENST00000552896 SLC52A1Q9NWF4 448 aa17.49■□□□□ 0.39
TRAFD1-209ENST00000552896 THEMISQ8N1K5 641 aaPredicted RBP17.48■□□□□ 0.39
TRAFD1-209ENST00000552896 MED14O60244 1454 aa17.48■□□□□ 0.39
TRAFD1-209ENST00000552896 PKD2Q13563 968 aa17.47■□□□□ 0.39
TRAFD1-209ENST00000552896 SCAF11Q99590 1463 aaKnown RBP17.47■□□□□ 0.39
TRAFD1-209ENST00000552896 IDI1Q13907 227 aa17.46■□□□□ 0.39
TRAFD1-209ENST00000552896 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
TRAFD1-209ENST00000552896 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
TRAFD1-209ENST00000552896 TMEM2Q9UHN6 1383 aa17.44■□□□□ 0.38
TRAFD1-209ENST00000552896 NPHP4O75161 1426 aaPredicted RBP17.42■□□□□ 0.38
TRAFD1-209ENST00000552896 ZFYVE9O95405 1425 aa17.42■□□□□ 0.38
TRAFD1-209ENST00000552896 HRCP23327 699 aa17.42■□□□□ 0.38
TRAFD1-209ENST00000552896 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
TRAFD1-209ENST00000552896 ANKLE2Q86XL3 938 aa17.41■□□□□ 0.38
TRAFD1-209ENST00000552896 STAG3Q9UJ98 1225 aa17.41■□□□□ 0.38
TRAFD1-209ENST00000552896 PPLO60437 1756 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms