RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 NLRP1Q9C000 1473 aa14.69□□□□□ -0.06
PRKCH-203ENST00000552875 SAMD9LQ8IVG5 1584 aa14.69□□□□□ -0.06
PRKCH-203ENST00000552875 MEX3CQ5U5Q3 659 aaKnown RBP14.69□□□□□ -0.06
PRKCH-203ENST00000552875 UGGT1Q9NYU2 1555 aa14.68□□□□□ -0.06
PRKCH-203ENST00000552875 RXRBP28702 533 aa14.68□□□□□ -0.06
PRKCH-203ENST00000552875 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
PRKCH-203ENST00000552875 FBXO31Q5XUX0 539 aaPredicted RBP14.67□□□□□ -0.06
PRKCH-203ENST00000552875 ZNF777Q9ULD5 760 aaPredicted RBP14.67□□□□□ -0.06
PRKCH-203ENST00000552875 JCADQ9P266 1359 aa14.67□□□□□ -0.06
PRKCH-203ENST00000552875 PLXNC1O60486 1568 aa14.67□□□□□ -0.06
PRKCH-203ENST00000552875 CDC42BPBQ9Y5S2 1711 aa14.66□□□□□ -0.06
PRKCH-203ENST00000552875 PREX2Q70Z35 1606 aa14.66□□□□□ -0.06
PRKCH-203ENST00000552875 ZRANB1Q9UGI0 708 aa14.65□□□□□ -0.06
PRKCH-203ENST00000552875 ATP7AQ04656 1500 aa14.65□□□□□ -0.06
PRKCH-203ENST00000552875 KDM5DQ9BY66 1539 aa14.65□□□□□ -0.06
PRKCH-203ENST00000552875 MIA2Q96PC5 1412 aa14.65□□□□□ -0.06
PRKCH-203ENST00000552875 PZPP20742 1482 aa14.64□□□□□ -0.07
PRKCH-203ENST00000552875 HNRNPMP52272 730 aaKnown RBP eCLIP14.62□□□□□ -0.07
PRKCH-203ENST00000552875 LRRC9Q6ZRR7 1453 aa14.62□□□□□ -0.07
PRKCH-203ENST00000552875 CDK12Q9NYV4 1490 aaPredicted RBP14.62□□□□□ -0.07
PRKCH-203ENST00000552875 SPATA31A6Q5VVP1 1343 aa14.62□□□□□ -0.07
PRKCH-203ENST00000552875 WASHC2CQ9Y4E1 1318 aa14.61□□□□□ -0.07
PRKCH-203ENST00000552875 STRCP1A6NGW2 1772 aa14.6□□□□□ -0.07
PRKCH-203ENST00000552875 SYCP2Q9BX26 1530 aa14.6□□□□□ -0.07
PRKCH-203ENST00000552875 PLEKHH2Q8IVE3 1493 aa14.59□□□□□ -0.07
PRKCH-203ENST00000552875 KIAA1107Q9UPP5 1409 aa14.58□□□□□ -0.07
PRKCH-203ENST00000552875 ROBO1Q9Y6N7 1651 aa14.57□□□□□ -0.08
PRKCH-203ENST00000552875 INO80Q9ULG1 1556 aaPredicted RBP14.56□□□□□ -0.08
PRKCH-203ENST00000552875 TMEM94Q12767 1356 aa14.56□□□□□ -0.08
PRKCH-203ENST00000552875 KIF3BO15066 747 aa14.55□□□□□ -0.08
PRKCH-203ENST00000552875 EID1Q9Y6B2 187 aa14.54□□□□□ -0.08
PRKCH-203ENST00000552875 FGD6Q6ZV73 1430 aa14.54□□□□□ -0.08
PRKCH-203ENST00000552875 SCAF11Q99590 1463 aaKnown RBP14.54□□□□□ -0.08
PRKCH-203ENST00000552875 ADGBQ8N7X0 1667 aa14.53□□□□□ -0.08
PRKCH-203ENST00000552875 DHX29Q7Z478 1369 aaKnown RBP14.53□□□□□ -0.08
PRKCH-203ENST00000552875 NUTM2BA6NNL0 878 aaPredicted RBP14.53□□□□□ -0.08
PRKCH-203ENST00000552875 NUTM2EB1AL46 878 aaPredicted RBP14.53□□□□□ -0.08
PRKCH-203ENST00000552875 NUTM2DQ5VT03 806 aaPredicted RBP14.53□□□□□ -0.08
PRKCH-203ENST00000552875 NUTM2AQ8IVF1 878 aaPredicted RBP14.53□□□□□ -0.08
PRKCH-203ENST00000552875 CFDP1Q9UEE9 299 aaPredicted RBP14.53□□□□□ -0.08
PRKCH-203ENST00000552875 TXNDC2Q86VQ3 553 aa14.52□□□□□ -0.09
PRKCH-203ENST00000552875 SLAIN2Q9P270 581 aa14.52□□□□□ -0.09
PRKCH-203ENST00000552875 EEA1Q15075 1411 aa14.51□□□□□ -0.09
PRKCH-203ENST00000552875 MSH6P52701 1360 aa14.51□□□□□ -0.09
PRKCH-203ENST00000552875 PROSER2Q86WR7 435 aaPredicted RBP14.51□□□□□ -0.09
PRKCH-203ENST00000552875 CCDC18Q5T9S5 1454 aa14.5□□□□□ -0.09
PRKCH-203ENST00000552875 PHLPP1O60346 1717 aa14.49□□□□□ -0.09
PRKCH-203ENST00000552875 ZC3H13Q5T200 1668 aaKnown RBP14.49□□□□□ -0.09
PRKCH-203ENST00000552875 LRP6O75581 1613 aa14.49□□□□□ -0.09
PRKCH-203ENST00000552875 KCNA6P17658 529 aa14.49□□□□□ -0.09
PRKCH-203ENST00000552875 RBM33Q96EV2 1170 aaKnown RBP14.49□□□□□ -0.09
PRKCH-203ENST00000552875 ATAD2Q6PL18 1390 aa14.48□□□□□ -0.09
PRKCH-203ENST00000552875 CDC42BPAQ5VT25 1732 aa14.48□□□□□ -0.09
PRKCH-203ENST00000552875 RTEL1-TNFRSF6BF6WH68 1400 aa14.48□□□□□ -0.09
PRKCH-203ENST00000552875 GPATCH8Q9UKJ3 1502 aaKnown RBP14.47□□□□□ -0.09
PRKCH-203ENST00000552875 RBM6P78332 1123 aaKnown RBP14.47□□□□□ -0.09
PRKCH-203ENST00000552875 LTKP29376 864 aa14.46□□□□□ -0.09
PRKCH-203ENST00000552875 XIRP1Q702N8 1843 aaKnown RBP14.45□□□□□ -0.1
PRKCH-203ENST00000552875 NGLY1Q96IV0 654 aa14.45□□□□□ -0.1
PRKCH-203ENST00000552875 AFF2P51816 1311 aa14.44□□□□□ -0.1
PRKCH-203ENST00000552875 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
PRKCH-203ENST00000552875 RGS12O14924 1447 aa14.43□□□□□ -0.1
PRKCH-203ENST00000552875 MAP3K1Q13233 1512 aa14.43□□□□□ -0.1
PRKCH-203ENST00000552875 UBTFP17480 764 aaKnown RBP14.43□□□□□ -0.1
PRKCH-203ENST00000552875 CCDC125Q86Z20 511 aa14.43□□□□□ -0.1
PRKCH-203ENST00000552875 ARHGAP35Q9NRY4 1499 aa14.43□□□□□ -0.1
PRKCH-203ENST00000552875 SETBP1Q9Y6X0 1596 aa14.43□□□□□ -0.1
PRKCH-203ENST00000552875 ABCC3O15438 1527 aa14.42□□□□□ -0.1
PRKCH-203ENST00000552875 PRDM15P57071 1507 aaPredicted RBP14.42□□□□□ -0.1
PRKCH-203ENST00000552875 QTRT2Q9H974 415 aaKnown RBP14.42□□□□□ -0.1
PRKCH-203ENST00000552875 SLIT1O75093 1534 aa14.41□□□□□ -0.1
PRKCH-203ENST00000552875 COL16A1Q07092 1604 aaPredicted RBP14.41□□□□□ -0.1
PRKCH-203ENST00000552875 NKTRP30414 1462 aaKnown RBP14.41□□□□□ -0.1
PRKCH-203ENST00000552875 ARHGAP23Q9P227 1491 aa14.41□□□□□ -0.1
PRKCH-203ENST00000552875 ERVK-7P63135 1459 aa14.39□□□□□ -0.11
PRKCH-203ENST00000552875 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
PRKCH-203ENST00000552875 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
PRKCH-203ENST00000552875 NCOA2Q15596 1464 aa14.38□□□□□ -0.11
PRKCH-203ENST00000552875 TIAM1Q13009 1591 aa14.37□□□□□ -0.11
PRKCH-203ENST00000552875 UBR1Q8IWV7 1749 aa14.36□□□□□ -0.11
PRKCH-203ENST00000552875 RSPH4AQ5TD94 716 aa14.36□□□□□ -0.11
PRKCH-203ENST00000552875 SLC26A8Q96RN1 970 aa14.36□□□□□ -0.11
PRKCH-203ENST00000552875 SHPRHQ149N8 1683 aa14.36□□□□□ -0.11
PRKCH-203ENST00000552875 TMEM2Q9UHN6 1383 aa14.35□□□□□ -0.11
PRKCH-203ENST00000552875 C14orf37Q86TY3 774 aa14.35□□□□□ -0.11
PRKCH-203ENST00000552875 CADPS2Q86UW7 1296 aa14.35□□□□□ -0.11
PRKCH-203ENST00000552875 C8orf37Q96NL8 207 aa14.35□□□□□ -0.11
PRKCH-203ENST00000552875 LRRIQ1Q96JM4 1722 aa14.35□□□□□ -0.11
PRKCH-203ENST00000552875 MBD5Q9P267 1494 aa14.34□□□□□ -0.11
PRKCH-203ENST00000552875 BCANQ96GW7 911 aa14.34□□□□□ -0.11
PRKCH-203ENST00000552875 ATF3P18847 181 aa14.33□□□□□ -0.12
PRKCH-203ENST00000552875 AHDC1Q5TGY3 1603 aaPredicted RBP14.32□□□□□ -0.12
PRKCH-203ENST00000552875 ZNF644Q9H582 1327 aaPredicted RBP14.32□□□□□ -0.12
PRKCH-203ENST00000552875 NCOA3Q9Y6Q9 1424 aa14.32□□□□□ -0.12
PRKCH-203ENST00000552875 IFFO2Q5TF58 517 aa14.3□□□□□ -0.12
PRKCH-203ENST00000552875 TSPY4P0CV99 314 aa14.29□□□□□ -0.12
PRKCH-203ENST00000552875 TSPY10P0CW01 314 aa14.29□□□□□ -0.12
PRKCH-203ENST00000552875 LRRC59Q96AG4 307 aaKnown RBP14.29□□□□□ -0.12
PRKCH-203ENST00000552875 CCDC141Q6ZP82 1450 aa14.29□□□□□ -0.12
PRKCH-203ENST00000552875 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms